RNA–Protein interactions for RNA: ENST00000534551.2

VPS11-205, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS11, Length 585 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-205ENST00000534551 APOBEC3GQ9HC16 384 aaKnown RBP15.06■□□□□ 0
VPS11-205ENST00000534551 GDAP2Q9NXN4 497 aa15.06■□□□□ 0
VPS11-205ENST00000534551 ARMCX3Q9UH62 379 aaPredicted RBP15.06■□□□□ 0
VPS11-205ENST00000534551 USP15Q9Y4E8 981 aaPredicted RBP15.06■□□□□ 0
VPS11-205ENST00000534551 H7C4K7 107 aa15.05■□□□□ -0
VPS11-205ENST00000534551 NCK2O43639 380 aa15.05■□□□□ -0
VPS11-205ENST00000534551 OAZ2O95190 189 aa15.05■□□□□ -0
VPS11-205ENST00000534551 SEC24AO95486 1093 aa15.05■□□□□ -0
VPS11-205ENST00000534551 C8AP07357 584 aa15.05■□□□□ -0
VPS11-205ENST00000534551 SP100P23497 879 aaPredicted RBP15.05■□□□□ -0
VPS11-205ENST00000534551 PSMC1P62191 440 aaKnown RBP15.05■□□□□ -0
VPS11-205ENST00000534551 MYO1EQ12965 1108 aa15.05■□□□□ -0
VPS11-205ENST00000534551 SMAD4Q13485 552 aaKnown RBP15.05■□□□□ -0
VPS11-205ENST00000534551 SLC7A14Q8TBB6 771 aa15.05■□□□□ -0
VPS11-205ENST00000534551 SLC35C1Q96A29 364 aa15.05■□□□□ -0
VPS11-205ENST00000534551 CNOT6LQ96LI5 555 aaKnown RBP15.05■□□□□ -0
VPS11-205ENST00000534551 ASB2Q96Q27 587 aa15.05■□□□□ -0
VPS11-205ENST00000534551 S1PR5Q9H228 398 aa15.05■□□□□ -0
VPS11-205ENST00000534551 SFXN1Q9H9B4 322 aa15.05■□□□□ -0
VPS11-205ENST00000534551 TMEM8AQ9HCN3 771 aa15.05■□□□□ -0
VPS11-205ENST00000534551 TMLHEQ9NVH6 421 aa15.05■□□□□ -0
VPS11-205ENST00000534551 DDX43Q9NXZ2 648 aaKnown RBP15.05■□□□□ -0
VPS11-205ENST00000534551 R3HCC1Q9Y3T6 440 aaKnown RBP15.05■□□□□ -0
VPS11-205ENST00000534551 GREB1Q4ZG55 1949 aa15.05■□□□□ -0
VPS11-205ENST00000534551 FSD2A1L4K1 749 aa15.04■□□□□ -0
VPS11-205ENST00000534551 HUS1O60921 280 aa15.04■□□□□ -0
VPS11-205ENST00000534551 SOAT2O75908 522 aa15.04■□□□□ -0
VPS11-205ENST00000534551 SRGAP2BP0DMP2 458 aa15.04■□□□□ -0
VPS11-205ENST00000534551 AP3M2P53677 418 aa15.04■□□□□ -0
VPS11-205ENST00000534551 CDH8P55286 799 aa15.04■□□□□ -0
VPS11-205ENST00000534551 TNNC1P63316 161 aa15.04■□□□□ -0
VPS11-205ENST00000534551 NOP14P78316 857 aaKnown RBP15.04■□□□□ -0
VPS11-205ENST00000534551 MRPS5P82675 430 aaKnown RBP15.04■□□□□ -0
VPS11-205ENST00000534551 MYL7Q01449 175 aa15.04■□□□□ -0
VPS11-205ENST00000534551 WDR72Q3MJ13 1102 aa15.04■□□□□ -0
VPS11-205ENST00000534551 FOXR2Q6PJQ5 311 aa15.04■□□□□ -0
VPS11-205ENST00000534551 FILIP1Q7Z7B0 1213 aa15.04■□□□□ -0
VPS11-205ENST00000534551 LRRTM3Q86VH5 581 aa15.04■□□□□ -0
VPS11-205ENST00000534551 METTL23Q86XA0 190 aa15.04■□□□□ -0
VPS11-205ENST00000534551 IRF2BP1Q8IU81 584 aa15.04■□□□□ -0
VPS11-205ENST00000534551 TOP6BLQ8N6T0 577 aa15.04■□□□□ -0
VPS11-205ENST00000534551 ATXN2LQ8WWM7 1075 aaKnown RBP15.04■□□□□ -0
VPS11-205ENST00000534551 SYAP1Q96A49 352 aaPredicted RBP15.04■□□□□ -0
VPS11-205ENST00000534551 MMS19Q96T76 1030 aa15.04■□□□□ -0
VPS11-205ENST00000534551 LPIN3Q9BQK8 851 aa15.04■□□□□ -0
VPS11-205ENST00000534551 DNAJC25Q9H1X3 360 aa15.04■□□□□ -0
VPS11-205ENST00000534551 DPEP3Q9H4B8 488 aa15.04■□□□□ -0
VPS11-205ENST00000534551 DZANK1Q9NVP4 752 aa15.04■□□□□ -0
VPS11-205ENST00000534551 HMGXB4Q9UGU5 601 aa15.04■□□□□ -0
VPS11-205ENST00000534551 DSEQ9UL01 958 aa15.04■□□□□ -0
VPS11-205ENST00000534551 MYO16Q9Y6X6 1858 aa15.03■□□□□ -0
VPS11-205ENST00000534551 PATJQ8NI35 1801 aa15.03■□□□□ -0
VPS11-205ENST00000534551 MTMR11A4FU01 709 aa15.03■□□□□ -0
VPS11-205ENST00000534551 OR6C75A6NL08 312 aa15.03■□□□□ -0
VPS11-205ENST00000534551 IKBKBO14920 756 aa15.03■□□□□ -0
VPS11-205ENST00000534551 CCL16O15467 120 aa15.03■□□□□ -0
VPS11-205ENST00000534551 ATP2C2O75185 946 aa15.03■□□□□ -0
VPS11-205ENST00000534551 ASS1P00966 412 aaKnown RBP15.03■□□□□ -0
VPS11-205ENST00000534551 LMO2P25791 158 aa15.03■□□□□ -0
VPS11-205ENST00000534551 ASPAP45381 313 aa15.03■□□□□ -0
VPS11-205ENST00000534551 TYRO3Q06418 890 aa15.03■□□□□ -0
VPS11-205ENST00000534551 ADCY1Q08828 1119 aa15.03■□□□□ -0
VPS11-205ENST00000534551 ORC1Q13415 861 aa15.03■□□□□ -0
VPS11-205ENST00000534551 STX1AQ16623 288 aa15.03■□□□□ -0
VPS11-205ENST00000534551 KLHL40Q2TBA0 621 aa15.03■□□□□ -0
VPS11-205ENST00000534551 SLC39A12Q504Y0 691 aa15.03■□□□□ -0
VPS11-205ENST00000534551 LIN9Q5TKA1 542 aa15.03■□□□□ -0
VPS11-205ENST00000534551 LIMS2Q7Z4I7 341 aa15.03■□□□□ -0
VPS11-205ENST00000534551 FRMD5Q7Z6J6 570 aa15.03■□□□□ -0
VPS11-205ENST00000534551 CREBRFQ8IUR6 639 aa15.03■□□□□ -0
VPS11-205ENST00000534551 TRIM59Q8IWR1 403 aa15.03■□□□□ -0
VPS11-205ENST00000534551 ATAD1Q8NBU5 361 aa15.03■□□□□ -0
VPS11-205ENST00000534551 STKLD1Q8NE28 680 aa15.03■□□□□ -0
VPS11-205ENST00000534551 ZNF707Q96C28 371 aaPredicted RBP15.03■□□□□ -0
VPS11-205ENST00000534551 RHOBTB2Q9BYZ6 727 aa15.03■□□□□ -0
VPS11-205ENST00000534551 ZCWPW1Q9H0M4 648 aa15.03■□□□□ -0
VPS11-205ENST00000534551 DENND4CQ5VZ89 1909 aa15.03■□□□□ -0
VPS11-205ENST00000534551 ZNF638Q14966 1978 aaKnown RBP15.02■□□□□ -0
VPS11-205ENST00000534551 GABRDO14764 452 aa15.02■□□□□ -0
VPS11-205ENST00000534551 ZMYND10O75800 440 aa15.02■□□□□ -0
VPS11-205ENST00000534551 ABLIM3O94929 683 aa15.02■□□□□ -0
VPS11-205ENST00000534551 STAU1O95793 577 aaKnown RBP15.02■□□□□ -0
VPS11-205ENST00000534551 BMP1P13497 986 aa15.02■□□□□ -0
VPS11-205ENST00000534551 FMO5P49326 533 aa15.02■□□□□ -0
VPS11-205ENST00000534551 MCCD1P59942 119 aaPredicted RBP15.02■□□□□ -0
VPS11-205ENST00000534551 NTHL1P78549 312 aa15.02■□□□□ -0
VPS11-205ENST00000534551 ENPEPQ07075 957 aa15.02■□□□□ -0
VPS11-205ENST00000534551 ZNF667Q5HYK9 610 aa15.02■□□□□ -0
VPS11-205ENST00000534551 KRT39Q6A163 491 aa15.02■□□□□ -0
VPS11-205ENST00000534551 SASS6Q6UVJ0 657 aa15.02■□□□□ -0
VPS11-205ENST00000534551 SUSD6Q92537 303 aa15.02■□□□□ -0
VPS11-205ENST00000534551 PKMYT1Q99640 499 aa15.02■□□□□ -0
VPS11-205ENST00000534551 ARID3AQ99856 593 aa15.02■□□□□ -0
VPS11-205ENST00000534551 POMKQ9H5K3 350 aa15.02■□□□□ -0
VPS11-205ENST00000534551 VRTNQ9H8Y1 702 aa15.02■□□□□ -0
VPS11-205ENST00000534551 CYP4F11Q9HBI6 524 aa15.02■□□□□ -0
VPS11-205ENST00000534551 ABI2Q9NYB9 513 aaPredicted RBP15.02■□□□□ -0
VPS11-205ENST00000534551 DACH1Q9UI36 760 aa15.02■□□□□ -0
VPS11-205ENST00000534551 MUC3AQ02505 3323 aa15.02□□□□□ -0.01
VPS11-205ENST00000534551 CCDC195A0A1B0GUA6 201 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 134.8 ms