RNA–Protein interactions for RNA: ENST00000524126.5

SPIDR-224, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 1 (best)

Gene SPIDR, Length 2,614 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-224ENST00000524126 PDE1BQ01064 536 aa10.73□□□□□ -0.69
SPIDR-224ENST00000524126 PLCB3Q01970 1234 aa10.73□□□□□ -0.69
SPIDR-224ENST00000524126 FOLH1Q04609 750 aa10.73□□□□□ -0.69
SPIDR-224ENST00000524126 TLR1Q15399 786 aa10.73□□□□□ -0.69
SPIDR-224ENST00000524126 CYP1B1Q16678 543 aa10.73□□□□□ -0.69
SPIDR-224ENST00000524126 TRMT5Q32P41 509 aaKnown RBP10.73□□□□□ -0.69
SPIDR-224ENST00000524126 PRR5LQ6MZQ0 368 aa10.73□□□□□ -0.69
SPIDR-224ENST00000524126 ARHGAP24Q8N264 748 aa10.73□□□□□ -0.69
SPIDR-224ENST00000524126 HIPK4Q8NE63 616 aa10.73□□□□□ -0.69
SPIDR-224ENST00000524126 MTBPQ96DY7 904 aa10.73□□□□□ -0.69
SPIDR-224ENST00000524126 MAML3Q96JK9 1138 aa10.73□□□□□ -0.69
SPIDR-224ENST00000524126 HNRNPABQ99729 332 aaKnown RBP10.73□□□□□ -0.69
SPIDR-224ENST00000524126 MRPL1Q9BYD6 325 aaKnown RBP10.73□□□□□ -0.69
SPIDR-224ENST00000524126 ZHX3Q9H4I2 956 aa10.73□□□□□ -0.69
SPIDR-224ENST00000524126 PLA2G4CQ9UP65 541 aa10.73□□□□□ -0.69
SPIDR-224ENST00000524126 CLEC11AQ9Y240 323 aa10.73□□□□□ -0.69
SPIDR-224ENST00000524126 BAZ2AQ9UIF9 1905 aaKnown RBP10.73□□□□□ -0.69
SPIDR-224ENST00000524126 OXSR1O95747 527 aaPredicted RBP10.72□□□□□ -0.69
SPIDR-224ENST00000524126 RRM1P23921 792 aa10.72□□□□□ -0.69
SPIDR-224ENST00000524126 HOXD11P31277 338 aaPredicted RBP10.72□□□□□ -0.69
SPIDR-224ENST00000524126 STAT4Q14765 748 aa10.72□□□□□ -0.69
SPIDR-224ENST00000524126 C16orf72Q14CZ0 275 aa10.72□□□□□ -0.69
SPIDR-224ENST00000524126 C6orf163Q5TEZ5 329 aa10.72□□□□□ -0.69
SPIDR-224ENST00000524126 TMEM214Q6NUQ4 689 aaKnown RBP10.72□□□□□ -0.69
SPIDR-224ENST00000524126 TMC7Q7Z402 723 aa10.72□□□□□ -0.69
SPIDR-224ENST00000524126 SLC7A5P1Q8MH63 180 aa10.72□□□□□ -0.69
SPIDR-224ENST00000524126 PPP4R1Q8TF05 950 aa10.72□□□□□ -0.69
SPIDR-224ENST00000524126 KLF6Q99612 283 aaPredicted RBP10.72□□□□□ -0.69
SPIDR-224ENST00000524126 HEPHQ9BQS7 1158 aa10.72□□□□□ -0.69
SPIDR-224ENST00000524126 TRIM55Q9BYV6 548 aa10.72□□□□□ -0.69
SPIDR-224ENST00000524126 S100A14Q9HCY8 104 aa10.72□□□□□ -0.69
SPIDR-224ENST00000524126 LRP2BPQ9P2M1 347 aa10.72□□□□□ -0.69
SPIDR-224ENST00000524126 STK17AQ9UEE5 414 aa10.72□□□□□ -0.69
SPIDR-224ENST00000524126 MTUS1Q9ULD2 1270 aa10.72□□□□□ -0.69
SPIDR-224ENST00000524126 DMTF1Q9Y222 760 aa10.72□□□□□ -0.69
SPIDR-224ENST00000524126 A0A1B0GTW7 788 aa10.72□□□□□ -0.69
SPIDR-224ENST00000524126 GOLGA8RI6L899 631 aa10.72□□□□□ -0.69
SPIDR-224ENST00000524126 BIRC5O15392 142 aa10.72□□□□□ -0.69
SPIDR-224ENST00000524126 TYROBPO43914 113 aa10.72□□□□□ -0.69
SPIDR-224ENST00000524126 FOXD2O60548 495 aaPredicted RBP10.72□□□□□ -0.69
SPIDR-224ENST00000524126 ITIH2P19823 946 aa10.72□□□□□ -0.69
SPIDR-224ENST00000524126 PMLP29590 882 aa10.72□□□□□ -0.69
SPIDR-224ENST00000524126 ADCY8P40145 1251 aa10.72□□□□□ -0.69
SPIDR-224ENST00000524126 STAT1P42224 750 aa10.72□□□□□ -0.69
SPIDR-224ENST00000524126 CASP5P51878 434 aa10.72□□□□□ -0.69
SPIDR-224ENST00000524126 NOP14P78316 857 aaKnown RBP10.72□□□□□ -0.69
SPIDR-224ENST00000524126 CD300CQ08708 224 aa10.72□□□□□ -0.69
SPIDR-224ENST00000524126 RASA2Q15283 850 aa10.72□□□□□ -0.69
SPIDR-224ENST00000524126 TRIP10Q15642 601 aa10.72□□□□□ -0.69
SPIDR-224ENST00000524126 PDCD4Q53EL6 469 aaKnown RBP10.72□□□□□ -0.69
SPIDR-224ENST00000524126 ZNF772Q68DY9 489 aaPredicted RBP10.72□□□□□ -0.69
SPIDR-224ENST00000524126 IYDQ6PHW0 289 aa10.72□□□□□ -0.69
SPIDR-224ENST00000524126 TPTE2Q6XPS3 522 aa10.72□□□□□ -0.69
SPIDR-224ENST00000524126 POU5F2Q8N7G0 328 aa10.72□□□□□ -0.69
SPIDR-224ENST00000524126 SNX27Q96L92 541 aa10.72□□□□□ -0.69
SPIDR-224ENST00000524126 CCDC77Q9BR77 488 aa10.72□□□□□ -0.69
SPIDR-224ENST00000524126 TUBB6Q9BUF5 446 aa10.72□□□□□ -0.69
SPIDR-224ENST00000524126 HBS1LQ9Y450 684 aaKnown RBP10.72□□□□□ -0.69
SPIDR-224ENST00000524126 ATAD5Q96QE3 1844 aa10.72□□□□□ -0.69
SPIDR-224ENST00000524126 MROH5Q6ZUA9 1318 aa10.72□□□□□ -0.69
SPIDR-224ENST00000524126 SH3PXD2BA1X283 911 aa10.71□□□□□ -0.69
SPIDR-224ENST00000524126 CAPN8A6NHC0 703 aa10.71□□□□□ -0.69
SPIDR-224ENST00000524126 NDC80O14777 642 aa10.71□□□□□ -0.69
SPIDR-224ENST00000524126 STRNO43815 780 aa10.71□□□□□ -0.69
SPIDR-224ENST00000524126 TM7SF2O76062 418 aa10.71□□□□□ -0.69
SPIDR-224ENST00000524126 MYL2P10916 166 aa10.71□□□□□ -0.69
SPIDR-224ENST00000524126 PLS3P13797 630 aa10.71□□□□□ -0.69
SPIDR-224ENST00000524126 ATF2P15336 505 aa10.71□□□□□ -0.69
SPIDR-224ENST00000524126 KRT72Q14CN4 511 aa10.71□□□□□ -0.69
SPIDR-224ENST00000524126 SF3B3Q15393 1217 aaKnown RBP10.71□□□□□ -0.69
SPIDR-224ENST00000524126 GRAMD1BQ3KR37 738 aa10.71□□□□□ -0.69
SPIDR-224ENST00000524126 SGO2Q562F6 1265 aa10.71□□□□□ -0.69
SPIDR-224ENST00000524126 ARSHQ5FYA8 562 aa10.71□□□□□ -0.69
SPIDR-224ENST00000524126 TMCO4Q5TGY1 634 aa10.71□□□□□ -0.69
SPIDR-224ENST00000524126 PPM1KQ8N3J5 372 aa10.71□□□□□ -0.69
SPIDR-224ENST00000524126 RNF169Q8NCN4 708 aa10.71□□□□□ -0.69
SPIDR-224ENST00000524126 ZNF398Q8TD17 642 aa10.71□□□□□ -0.69
SPIDR-224ENST00000524126 TBCKQ8TEA7 893 aa10.71□□□□□ -0.69
SPIDR-224ENST00000524126 OXNAD1Q96HP4 312 aaPredicted RBP10.71□□□□□ -0.69
SPIDR-224ENST00000524126 TTC25Q96NG3 672 aa10.71□□□□□ -0.69
SPIDR-224ENST00000524126 RBM15Q96T37 977 aaKnown RBP eCLIP10.71□□□□□ -0.69
SPIDR-224ENST00000524126 TCHPQ9BT92 498 aa10.71□□□□□ -0.69
SPIDR-224ENST00000524126 MXD3Q9BW11 206 aa10.71□□□□□ -0.69
SPIDR-224ENST00000524126 SMYD3Q9H7B4 428 aa10.71□□□□□ -0.69
SPIDR-224ENST00000524126 GPCPD1Q9NPB8 672 aa10.71□□□□□ -0.69
SPIDR-224ENST00000524126 SLC17A7Q9P2U7 560 aa10.71□□□□□ -0.69
SPIDR-224ENST00000524126 HESX1Q9UBX0 185 aa10.71□□□□□ -0.69
SPIDR-224ENST00000524126 CROTQ9UKG9 612 aa10.71□□□□□ -0.69
SPIDR-224ENST00000524126 FAM32AQ9Y421 112 aaKnown RBP10.71□□□□□ -0.69
SPIDR-224ENST00000524126 COL1A1P02452 1464 aaPredicted RBP10.71□□□□□ -0.69
SPIDR-224ENST00000524126 COL24A1Q17RW2 1714 aa10.71□□□□□ -0.69
SPIDR-224ENST00000524126 FAM237BA0A1B0GVD1 139 aa10.71□□□□□ -0.69
SPIDR-224ENST00000524126 DCAF8L1A6NGE4 600 aa10.71□□□□□ -0.69
SPIDR-224ENST00000524126 EIF3FO00303 357 aaPredicted RBP10.71□□□□□ -0.69
SPIDR-224ENST00000524126 WDR46O15213 610 aaKnown RBP10.71□□□□□ -0.69
SPIDR-224ENST00000524126 SLC37A4O43826 429 aa10.71□□□□□ -0.69
SPIDR-224ENST00000524126 LMNB1P20700 586 aa10.71□□□□□ -0.69
SPIDR-224ENST00000524126 CASP4P49662 377 aa10.71□□□□□ -0.69
SPIDR-224ENST00000524126 VCPP55072 806 aaKnown RBP10.71□□□□□ -0.69
SPIDR-224ENST00000524126 CYP4A11Q02928 519 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms