RNA–Protein interactions for RNA: ENST00000511944.5

NR1I3-230, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 620 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-230ENST00000511944 XYLT2Q9H1B5 865 aa9.75□□□□□ -0.85
NR1I3-230ENST00000511944 SLC38A7Q9NVC3 462 aa9.75□□□□□ -0.85
NR1I3-230ENST00000511944 UBQLN1Q9UMX0 589 aaKnown RBP9.75□□□□□ -0.85
NR1I3-230ENST00000511944 ST3GAL5Q9UNP4 418 aa9.75□□□□□ -0.85
NR1I3-230ENST00000511944 GINS2Q9Y248 185 aa9.75□□□□□ -0.85
NR1I3-230ENST00000511944 GIT1Q9Y2X7 761 aa9.75□□□□□ -0.85
NR1I3-230ENST00000511944 R3HCC1Q9Y3T6 440 aaKnown RBP9.75□□□□□ -0.85
NR1I3-230ENST00000511944 NOC2LQ9Y3T9 749 aaKnown RBP9.75□□□□□ -0.85
NR1I3-230ENST00000511944 PCDHB2Q9Y5E7 798 aa9.75□□□□□ -0.85
NR1I3-230ENST00000511944 A0A0A6YYK5 440 aaPredicted RBP9.74□□□□□ -0.85
NR1I3-230ENST00000511944 A0A1W2PRU2 124 aa9.74□□□□□ -0.85
NR1I3-230ENST00000511944 FOXN3O00409 490 aaPredicted RBP9.74□□□□□ -0.85
NR1I3-230ENST00000511944 KIF5CO60282 957 aa9.74□□□□□ -0.85
NR1I3-230ENST00000511944 LZTS3O60299 673 aaPredicted RBP9.74□□□□□ -0.85
NR1I3-230ENST00000511944 CSDE1O75534 798 aaKnown RBP9.74□□□□□ -0.85
NR1I3-230ENST00000511944 CKBP12277 381 aa9.74□□□□□ -0.85
NR1I3-230ENST00000511944 GZMAP12544 262 aa9.74□□□□□ -0.85
NR1I3-230ENST00000511944 BMP2P12643 396 aa9.74□□□□□ -0.85
NR1I3-230ENST00000511944 ATF7P17544 494 aaPredicted RBP9.74□□□□□ -0.85
NR1I3-230ENST00000511944 THPOP40225 353 aa9.74□□□□□ -0.85
NR1I3-230ENST00000511944 CTSOP43234 321 aaPredicted RBP9.74□□□□□ -0.85
NR1I3-230ENST00000511944 PDE6CP51160 858 aa9.74□□□□□ -0.85
NR1I3-230ENST00000511944 KIF5AQ12840 1032 aa9.74□□□□□ -0.85
NR1I3-230ENST00000511944 MYO1EQ12965 1108 aa9.74□□□□□ -0.85
NR1I3-230ENST00000511944 TUBB2AQ13885 445 aa9.74□□□□□ -0.85
NR1I3-230ENST00000511944 DSC3Q14574 896 aa9.74□□□□□ -0.85
NR1I3-230ENST00000511944 NAB2Q15742 525 aa9.74□□□□□ -0.85
NR1I3-230ENST00000511944 ZNF699Q32M78 642 aa9.74□□□□□ -0.85
NR1I3-230ENST00000511944 TWF2Q6IBS0 349 aaKnown RBP9.74□□□□□ -0.85
NR1I3-230ENST00000511944 TRIM72Q6ZMU5 477 aa9.74□□□□□ -0.85
NR1I3-230ENST00000511944 ZNF571Q7Z3V5 609 aaPredicted RBP9.74□□□□□ -0.85
NR1I3-230ENST00000511944 FAM126BQ8IXS8 530 aa9.74□□□□□ -0.85
NR1I3-230ENST00000511944 UBR7Q8N806 425 aa9.74□□□□□ -0.85
NR1I3-230ENST00000511944 C1orf127Q8N9H9 656 aa9.74□□□□□ -0.85
NR1I3-230ENST00000511944 SLC30A5Q8TAD4 765 aa9.74□□□□□ -0.85
NR1I3-230ENST00000511944 PGBD4Q96DM1 585 aa9.74□□□□□ -0.85
NR1I3-230ENST00000511944 PPP1R16BQ96T49 567 aa9.74□□□□□ -0.85
NR1I3-230ENST00000511944 TUBB2BQ9BVA1 445 aa9.74□□□□□ -0.85
NR1I3-230ENST00000511944 EIF2AQ9BY44 585 aaKnown RBP9.74□□□□□ -0.85
NR1I3-230ENST00000511944 DNAI2Q9GZS0 605 aa9.74□□□□□ -0.85
NR1I3-230ENST00000511944 RNF208Q9H0X6 261 aa9.74□□□□□ -0.85
NR1I3-230ENST00000511944 RRAGDQ9NQL2 400 aaPredicted RBP9.74□□□□□ -0.85
NR1I3-230ENST00000511944 NAGPAQ9UK23 515 aa9.74□□□□□ -0.85
NR1I3-230ENST00000511944 AJAP1Q9UKB5 411 aaPredicted RBP9.74□□□□□ -0.85
NR1I3-230ENST00000511944 IPPQ9Y573 584 aa9.74□□□□□ -0.85
NR1I3-230ENST00000511944 PAXBP1Q9Y5B6 917 aa9.74□□□□□ -0.85
NR1I3-230ENST00000511944 A0A0U1RQF3 1178 aa9.73□□□□□ -0.85
NR1I3-230ENST00000511944 ANO9A1A5B4 782 aa9.73□□□□□ -0.85
NR1I3-230ENST00000511944 MEFVO15553 781 aaPredicted RBP9.73□□□□□ -0.85
NR1I3-230ENST00000511944 RECQL4O94761 1208 aa9.73□□□□□ -0.85
NR1I3-230ENST00000511944 SGPL1O95470 568 aa9.73□□□□□ -0.85
NR1I3-230ENST00000511944 EOMESO95936 686 aa9.73□□□□□ -0.85
NR1I3-230ENST00000511944 IL2RAP01589 272 aa9.73□□□□□ -0.85
NR1I3-230ENST00000511944 NFICP08651 508 aa9.73□□□□□ -0.85
NR1I3-230ENST00000511944 PAEPP09466 180 aa9.73□□□□□ -0.85
NR1I3-230ENST00000511944 HSPA8P11142 646 aaKnown RBP9.73□□□□□ -0.85
NR1I3-230ENST00000511944 SNRPBP14678 240 aaKnown RBP9.73□□□□□ -0.85
NR1I3-230ENST00000511944 SELPP16109 830 aa9.73□□□□□ -0.85
NR1I3-230ENST00000511944 FGFR4P22455 802 aa9.73□□□□□ -0.85
NR1I3-230ENST00000511944 LRPAP1P30533 357 aa9.73□□□□□ -0.85
NR1I3-230ENST00000511944 CTCFP49711 727 aaPredicted RBP9.73□□□□□ -0.85
NR1I3-230ENST00000511944 ZNF132P52740 706 aa9.73□□□□□ -0.85
NR1I3-230ENST00000511944 APBA1Q02410 837 aa9.73□□□□□ -0.85
NR1I3-230ENST00000511944 LPIN1Q14693 890 aa9.73□□□□□ -0.85
NR1I3-230ENST00000511944 TCEAL1Q15170 157 aa9.73□□□□□ -0.85
NR1I3-230ENST00000511944 IFI16Q16666 785 aaKnown RBP9.73□□□□□ -0.85
NR1I3-230ENST00000511944 SEZ6Q53EL9 994 aa9.73□□□□□ -0.85
NR1I3-230ENST00000511944 ZNF667Q5HYK9 610 aa9.73□□□□□ -0.85
NR1I3-230ENST00000511944 ALKBH5Q6P6C2 394 aaKnown RBP9.73□□□□□ -0.85
NR1I3-230ENST00000511944 GJB7Q6PEY0 223 aa9.73□□□□□ -0.85
NR1I3-230ENST00000511944 CYP2U1Q7Z449 544 aa9.73□□□□□ -0.85
NR1I3-230ENST00000511944 KIAA1328Q86T90 577 aa9.73□□□□□ -0.85
NR1I3-230ENST00000511944 TMEM192Q8IY95 271 aa9.73□□□□□ -0.85
NR1I3-230ENST00000511944 SMG8Q8ND04 991 aaKnown RBP9.73□□□□□ -0.85
NR1I3-230ENST00000511944 KIF18AQ8NI77 898 aa9.73□□□□□ -0.85
NR1I3-230ENST00000511944 SPATA18Q8TC71 538 aa9.73□□□□□ -0.85
NR1I3-230ENST00000511944 APBB2Q92870 758 aa9.73□□□□□ -0.85
NR1I3-230ENST00000511944 WNT8BQ93098 351 aa9.73□□□□□ -0.85
NR1I3-230ENST00000511944 ZNF560Q96MR9 790 aa9.73□□□□□ -0.85
NR1I3-230ENST00000511944 DEFB118Q96PH6 123 aa9.73□□□□□ -0.85
NR1I3-230ENST00000511944 DESI2Q9BSY9 194 aa9.73□□□□□ -0.85
NR1I3-230ENST00000511944 NXF3Q9H4D5 531 aaKnown RBP9.73□□□□□ -0.85
NR1I3-230ENST00000511944 ETNK1Q9HBU6 452 aa9.73□□□□□ -0.85
NR1I3-230ENST00000511944 TRMT13Q9NUP7 481 aaKnown RBP9.73□□□□□ -0.85
NR1I3-230ENST00000511944 FAM105AQ9NUU6 356 aa9.73□□□□□ -0.85
NR1I3-230ENST00000511944 DPP3Q9NY33 737 aa9.73□□□□□ -0.85
NR1I3-230ENST00000511944 SIX4Q9UIU6 781 aa9.73□□□□□ -0.85
NR1I3-230ENST00000511944 NOCTQ9UK39 431 aaKnown RBP9.73□□□□□ -0.85
NR1I3-230ENST00000511944 PADI3Q9ULW8 664 aa9.73□□□□□ -0.85
NR1I3-230ENST00000511944 REXO2Q9Y3B8 237 aaKnown RBP9.73□□□□□ -0.85
NR1I3-230ENST00000511944 PCDHA13Q9Y5I0 950 aa9.73□□□□□ -0.85
NR1I3-230ENST00000511944 A0A087X0T9 212 aa9.72□□□□□ -0.85
NR1I3-230ENST00000511944 SMIM28A0A1B0GU29 152 aa9.72□□□□□ -0.85
NR1I3-230ENST00000511944 USP27XA6NNY8 438 aa9.72□□□□□ -0.85
NR1I3-230ENST00000511944 SOBPA7XYQ1 873 aa9.72□□□□□ -0.85
NR1I3-230ENST00000511944 ZNF263O14978 683 aa9.72□□□□□ -0.85
NR1I3-230ENST00000511944 LSM8O95777 96 aaKnown RBP9.72□□□□□ -0.85
NR1I3-230ENST00000511944 FAM228BP0C875 321 aa9.72□□□□□ -0.85
NR1I3-230ENST00000511944 TNNT1P13805 278 aa9.72□□□□□ -0.85
NR1I3-230ENST00000511944 ACO1P21399 889 aaKnown RBP9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms