RNA–Protein interactions for RNA: ENSMUST00000110505.7

Hmgb1-203, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 1,720 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-203ENSMUST00000110505 Prf1P10820 554 aa4.8□□□□□ -1.64
Hmgb1-203ENSMUST00000110505 Parp1P11103 1013 aaKnown RBP4.8□□□□□ -1.64
Hmgb1-203ENSMUST00000110505 Pax3P24610 479 aa4.8□□□□□ -1.64
Hmgb1-203ENSMUST00000110505 Ckmt1P30275 418 aaKnown RBP4.8□□□□□ -1.64
Hmgb1-203ENSMUST00000110505 HalP35492 657 aa4.8□□□□□ -1.64
Hmgb1-203ENSMUST00000110505 EdnrbP48302 442 aa4.8□□□□□ -1.64
Hmgb1-203ENSMUST00000110505 Scg2Q03517 617 aa4.8□□□□□ -1.64
Hmgb1-203ENSMUST00000110505 Cdca2Q14B71 982 aaKnown RBP4.8□□□□□ -1.64
Hmgb1-203ENSMUST00000110505 Dhrs11Q3U0B3 260 aa4.8□□□□□ -1.64
Hmgb1-203ENSMUST00000110505 Ttc9Q3V038 219 aa4.8□□□□□ -1.64
Hmgb1-203ENSMUST00000110505 Rnf207Q3V3A7 635 aa4.8□□□□□ -1.64
Hmgb1-203ENSMUST00000110505 Uimc1Q5U5Q9 727 aa4.8□□□□□ -1.64
Hmgb1-203ENSMUST00000110505 CpQ61147 1061 aa4.8□□□□□ -1.64
Hmgb1-203ENSMUST00000110505 Smad2Q62432 467 aa4.8□□□□□ -1.64
Hmgb1-203ENSMUST00000110505 Srd5a1Q68FF9 255 aa4.8□□□□□ -1.64
Hmgb1-203ENSMUST00000110505 Ube2r2Q6ZWZ2 238 aa4.8□□□□□ -1.64
Hmgb1-203ENSMUST00000110505 PicalmQ7M6Y3 660 aaKnown RBP4.8□□□□□ -1.64
Hmgb1-203ENSMUST00000110505 Gprc5aQ8BHL4 356 aa4.8□□□□□ -1.64
Hmgb1-203ENSMUST00000110505 Noc4lQ8BHY2 516 aa4.8□□□□□ -1.64
Hmgb1-203ENSMUST00000110505 Pik3cbQ8BTI9 1064 aa4.8□□□□□ -1.64
Hmgb1-203ENSMUST00000110505 9230110C19RikQ8CC70 267 aa4.8□□□□□ -1.64
Hmgb1-203ENSMUST00000110505 Ano2Q8CFW1 1002 aa4.8□□□□□ -1.64
Hmgb1-203ENSMUST00000110505 Habp2Q8K0D2 558 aa4.8□□□□□ -1.64
Hmgb1-203ENSMUST00000110505 Prkd3Q8K1Y2 889 aa4.8□□□□□ -1.64
Hmgb1-203ENSMUST00000110505 Camkk1Q8VBY2 505 aa4.8□□□□□ -1.64
Hmgb1-203ENSMUST00000110505 Mtmr6Q8VE11 617 aa4.8□□□□□ -1.64
Hmgb1-203ENSMUST00000110505 Brms1Q99N20 246 aa4.8□□□□□ -1.64
Hmgb1-203ENSMUST00000110505 Isl2Q9CXV0 359 aa4.8□□□□□ -1.64
Hmgb1-203ENSMUST00000110505 Dnajc18Q9CZJ9 357 aa4.8□□□□□ -1.64
Hmgb1-203ENSMUST00000110505 MtpapQ9D0D3 585 aaKnown RBP4.8□□□□□ -1.64
Hmgb1-203ENSMUST00000110505 Stk39Q9Z1W9 556 aa4.8□□□□□ -1.64
Hmgb1-203ENSMUST00000110505 LctF8VPT3 1931 aa4.8□□□□□ -1.64
Hmgb1-203ENSMUST00000110505 Atad5Q4QY64 1826 aa4.8□□□□□ -1.64
Hmgb1-203ENSMUST00000110505 Baz2aQ91YE5 1889 aaKnown RBP4.8□□□□□ -1.64
Hmgb1-203ENSMUST00000110505 Odf2A3KGV1 830 aaKnown RBP4.8□□□□□ -1.64
Hmgb1-203ENSMUST00000110505 MtrA6H5Y3 1253 aa4.8□□□□□ -1.64
Hmgb1-203ENSMUST00000110505 3110082J24RikF6Z6Z2 108 aa4.8□□□□□ -1.64
Hmgb1-203ENSMUST00000110505 Usp35M0QWN7 1009 aa4.8□□□□□ -1.64
Hmgb1-203ENSMUST00000110505 Angpt1O08538 498 aa4.8□□□□□ -1.64
Hmgb1-203ENSMUST00000110505 Casp12O08736 419 aa4.8□□□□□ -1.64
Hmgb1-203ENSMUST00000110505 Tnfaip1O70479 316 aa4.8□□□□□ -1.64
Hmgb1-203ENSMUST00000110505 Yme1l1O88967 715 aaKnown RBP4.8□□□□□ -1.64
Hmgb1-203ENSMUST00000110505 PrnpP04925 254 aa4.8□□□□□ -1.64
Hmgb1-203ENSMUST00000110505 Resp18P47939 175 aa4.8□□□□□ -1.64
Hmgb1-203ENSMUST00000110505 Cdkn1cP49919 348 aa4.8□□□□□ -1.64
Hmgb1-203ENSMUST00000110505 Sec23aQ01405 765 aa4.8□□□□□ -1.64
Hmgb1-203ENSMUST00000110505 VcpQ01853 806 aaKnown RBP4.8□□□□□ -1.64
Hmgb1-203ENSMUST00000110505 ZbbxQ0P5X5 716 aa4.8□□□□□ -1.64
Hmgb1-203ENSMUST00000110505 Prss36Q5K2P8 849 aa4.8□□□□□ -1.64
Hmgb1-203ENSMUST00000110505 Nsrp1Q5NCR9 542 aa4.8□□□□□ -1.64
Hmgb1-203ENSMUST00000110505 Satb1Q60611 764 aa4.8□□□□□ -1.64
Hmgb1-203ENSMUST00000110505 LrmpQ60664 539 aa4.8□□□□□ -1.64
Hmgb1-203ENSMUST00000110505 Grm4Q68EF4 912 aa4.8□□□□□ -1.64
Hmgb1-203ENSMUST00000110505 Luc7l2Q7TNC4 392 aaKnown RBP4.8□□□□□ -1.64
Hmgb1-203ENSMUST00000110505 Ccp110Q7TSH4 1004 aa4.8□□□□□ -1.64
Hmgb1-203ENSMUST00000110505 Q8BGN9 141 aa4.8□□□□□ -1.64
Hmgb1-203ENSMUST00000110505 Ano1Q8BHY3 960 aa4.8□□□□□ -1.64
Hmgb1-203ENSMUST00000110505 Fam49aQ8BHZ0 323 aa4.8□□□□□ -1.64
Hmgb1-203ENSMUST00000110505 Nek11Q8C0Q4 628 aa4.8□□□□□ -1.64
Hmgb1-203ENSMUST00000110505 Terb1Q8C0V1 768 aa4.8□□□□□ -1.64
Hmgb1-203ENSMUST00000110505 Ftsj1Q8CBC7 324 aa4.8□□□□□ -1.64
Hmgb1-203ENSMUST00000110505 Wdr11Q8K1X1 1223 aa4.8□□□□□ -1.64
Hmgb1-203ENSMUST00000110505 Mtss1Q8R1S4 759 aa4.8□□□□□ -1.64
Hmgb1-203ENSMUST00000110505 Tbc1d13Q8R3D1 400 aa4.8□□□□□ -1.64
Hmgb1-203ENSMUST00000110505 Vmn1r51Q8VIC6 319 aa4.8□□□□□ -1.64
Hmgb1-203ENSMUST00000110505 Sh3d19Q91X43 789 aa4.8□□□□□ -1.64
Hmgb1-203ENSMUST00000110505 Tm4sf5Q91XF2 196 aa4.8□□□□□ -1.64
Hmgb1-203ENSMUST00000110505 Frmd4bQ920B0 1035 aa4.8□□□□□ -1.64
Hmgb1-203ENSMUST00000110505 Luc7lQ9CYI4 371 aaKnown RBP4.8□□□□□ -1.64
Hmgb1-203ENSMUST00000110505 Ifrd2Q9D8U0 441 aa4.8□□□□□ -1.64
Hmgb1-203ENSMUST00000110505 Spaca1Q9DA48 305 aa4.8□□□□□ -1.64
Hmgb1-203ENSMUST00000110505 Zbtb43Q9DAI4 467 aa4.8□□□□□ -1.64
Hmgb1-203ENSMUST00000110505 Asah2Q9JHE3 756 aa4.8□□□□□ -1.64
Hmgb1-203ENSMUST00000110505 Tmod3Q9JHJ0 352 aa4.8□□□□□ -1.64
Hmgb1-203ENSMUST00000110505 Clec1bQ9JL99 229 aa4.8□□□□□ -1.64
Hmgb1-203ENSMUST00000110505 Mmel1Q9JLI3 765 aa4.8□□□□□ -1.64
Hmgb1-203ENSMUST00000110505 Cnpy2Q9QXT0 182 aa4.8□□□□□ -1.64
Hmgb1-203ENSMUST00000110505 Dnajb7Q9QYI8 312 aa4.8□□□□□ -1.64
Hmgb1-203ENSMUST00000110505 Msl3Q9WVG9 525 aa4.8□□□□□ -1.64
Hmgb1-203ENSMUST00000110505 Sbf2E9PXF8 1872 aa4.79□□□□□ -1.64
Hmgb1-203ENSMUST00000110505 Arhgef10Q8C033 1345 aa4.79□□□□□ -1.64
Hmgb1-203ENSMUST00000110505 Wdr81Q5ND34 1934 aa4.79□□□□□ -1.64
Hmgb1-203ENSMUST00000110505 Igkv18-36A0A075B5M9 114 aa4.79□□□□□ -1.64
Hmgb1-203ENSMUST00000110505 Mindy4b-psA0A1W2P7H6 457 aa4.79□□□□□ -1.64
Hmgb1-203ENSMUST00000110505 Dhtkd1A2ATU0 921 aa4.79□□□□□ -1.64
Hmgb1-203ENSMUST00000110505 Arhgap4B1AUY3 965 aa4.79□□□□□ -1.64
Hmgb1-203ENSMUST00000110505 Cyp2b23E9Q593 491 aa4.79□□□□□ -1.64
Hmgb1-203ENSMUST00000110505 Plekha5E9Q6H8 1269 aa4.79□□□□□ -1.64
Hmgb1-203ENSMUST00000110505 Atp9aO70228 1047 aa4.79□□□□□ -1.64
Hmgb1-203ENSMUST00000110505 SfnO70456 248 aaKnown RBP4.79□□□□□ -1.64
Hmgb1-203ENSMUST00000110505 LdhaP06151 332 aaKnown RBP4.79□□□□□ -1.64
Hmgb1-203ENSMUST00000110505 Camk4P08414 469 aa4.79□□□□□ -1.64
Hmgb1-203ENSMUST00000110505 Sod2P09671 222 aa4.79□□□□□ -1.64
Hmgb1-203ENSMUST00000110505 MecomP14404 1042 aa4.79□□□□□ -1.64
Hmgb1-203ENSMUST00000110505 Cyr61P18406 379 aa4.79□□□□□ -1.64
Hmgb1-203ENSMUST00000110505 Gstp1P19157 210 aa4.79□□□□□ -1.64
Hmgb1-203ENSMUST00000110505 Gfpt1P47856 697 aa4.79□□□□□ -1.64
Hmgb1-203ENSMUST00000110505 Zscan4fQ3URS2 506 aa4.79□□□□□ -1.64
Hmgb1-203ENSMUST00000110505 Armc2Q3URY6 854 aa4.79□□□□□ -1.64
Hmgb1-203ENSMUST00000110505 Q3UUX7 111 aa4.79□□□□□ -1.64
Retrieved 100 of 22,080 RNA–protein pairs in 119.4 ms