Protein–RNA interactions for Protein: P04925

Prnp, Major prion protein, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrnpP04925 Gm25239-201ENSMUST00000174915 86 ntBASIC41.27■■■■■ 4.2
PrnpP04925 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC38.22■■■■□ 3.71
PrnpP04925 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC37.72■■■■□ 3.63
PrnpP04925 Gm15042-201ENSMUST00000120212 883 ntBASIC35.93■■■■□ 3.34
PrnpP04925 Gm24109-201ENSMUST00000175489 103 ntBASIC35.8■■■■□ 3.32
PrnpP04925 Gm15045-201ENSMUST00000117359 883 ntBASIC35.07■■■■□ 3.2
PrnpP04925 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC34.95■■■■□ 3.19
PrnpP04925 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC34.86■■■■□ 3.17
PrnpP04925 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC34.8■■■■□ 3.16
PrnpP04925 Gm23366-201ENSMUST00000175022 89 ntBASIC34.49■■■■□ 3.11
PrnpP04925 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC34.35■■■■□ 3.09
PrnpP04925 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC34.29■■■■□ 3.08
PrnpP04925 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC33.94■■■■□ 3.02
PrnpP04925 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC33.54■■■□□ 2.96
PrnpP04925 AC153911.1-202ENSMUST00000218534 1034 ntBASIC33.46■■■□□ 2.95
PrnpP04925 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC33.31■■■□□ 2.92
PrnpP04925 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC33.23■■■□□ 2.91
PrnpP04925 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC33.18■■■□□ 2.9
PrnpP04925 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC33.16■■■□□ 2.9
PrnpP04925 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC33.01■■■□□ 2.87
PrnpP04925 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC32.91■■■□□ 2.86
PrnpP04925 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC32.79■■■□□ 2.84
PrnpP04925 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC32.77■■■□□ 2.84
PrnpP04925 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC32.75■■■□□ 2.83
PrnpP04925 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC32.74■■■□□ 2.83
PrnpP04925 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC32.73■■■□□ 2.83
PrnpP04925 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC32.7■■■□□ 2.82
PrnpP04925 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC32.68■■■□□ 2.82
PrnpP04925 Gm25238-201ENSMUST00000174914 89 ntBASIC32.6■■■□□ 2.81
PrnpP04925 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
PrnpP04925 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC32.38■■■□□ 2.77
PrnpP04925 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC32.33■■■□□ 2.77
PrnpP04925 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC32.18■■■□□ 2.74
PrnpP04925 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
PrnpP04925 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC32.03■■■□□ 2.72
PrnpP04925 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC31.88■■■□□ 2.69
PrnpP04925 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
PrnpP04925 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC31.75■■■□□ 2.67
PrnpP04925 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC31.74■■■□□ 2.67
PrnpP04925 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
PrnpP04925 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC31.66■■■□□ 2.66
PrnpP04925 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC31.64■■■□□ 2.66
PrnpP04925 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC31.51■■■□□ 2.63
PrnpP04925 Gm27325-201ENSMUST00000175467 74 ntBASIC31.45■■■□□ 2.63
PrnpP04925 Psd-208ENSMUST00000224556 2034 ntBASIC31.45■■■□□ 2.63
PrnpP04925 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC31.4■■■□□ 2.62
PrnpP04925 Gm25262-201ENSMUST00000174934 133 ntBASIC31.37■■■□□ 2.61
PrnpP04925 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
PrnpP04925 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC31.1■■■□□ 2.57
PrnpP04925 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
PrnpP04925 Rab21-202ENSMUST00000218831 843 ntBASIC31.01■■■□□ 2.55
PrnpP04925 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
PrnpP04925 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC30.96■■■□□ 2.55
PrnpP04925 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC30.94■■■□□ 2.54
PrnpP04925 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC30.91■■■□□ 2.54
PrnpP04925 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
PrnpP04925 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC30.89■■■□□ 2.54
PrnpP04925 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
PrnpP04925 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC30.78■■■□□ 2.52
PrnpP04925 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
PrnpP04925 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC30.69■■■□□ 2.5
PrnpP04925 Gm26115-201ENSMUST00000175605 87 ntBASIC30.66■■■□□ 2.5
PrnpP04925 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC30.65■■■□□ 2.5
PrnpP04925 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
PrnpP04925 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
PrnpP04925 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC30.58■■■□□ 2.49
PrnpP04925 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC30.55■■■□□ 2.48
PrnpP04925 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC30.51■■■□□ 2.47
PrnpP04925 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
PrnpP04925 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
PrnpP04925 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC30.47■■■□□ 2.47
PrnpP04925 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC30.47■■■□□ 2.47
PrnpP04925 Gm8109-201ENSMUST00000194076 746 ntBASIC30.43■■■□□ 2.46
PrnpP04925 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC30.4■■■□□ 2.46
PrnpP04925 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
PrnpP04925 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC30.37■■■□□ 2.45
PrnpP04925 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
PrnpP04925 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
PrnpP04925 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
PrnpP04925 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC30.28■■■□□ 2.44
PrnpP04925 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
PrnpP04925 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC30.22■■■□□ 2.43
PrnpP04925 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC30.19■■■□□ 2.42
PrnpP04925 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC30.17■■■□□ 2.42
PrnpP04925 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC30.17■■■□□ 2.42
PrnpP04925 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
PrnpP04925 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC30.06■■■□□ 2.4
PrnpP04925 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
PrnpP04925 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC30■■■□□ 2.39
PrnpP04925 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC29.99■■■□□ 2.39
PrnpP04925 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
PrnpP04925 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
PrnpP04925 Gm17082-201ENSMUST00000166043 1091 ntBASIC29.89■■■□□ 2.38
PrnpP04925 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.37
PrnpP04925 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC29.88■■■□□ 2.37
PrnpP04925 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC29.87■■■□□ 2.37
PrnpP04925 Gm10524-201ENSMUST00000181931 1893 ntBASIC29.83■■■□□ 2.37
PrnpP04925 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
PrnpP04925 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
PrnpP04925 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms