RNA–Protein interactions for RNA: YPR135W

CTF4, Transcript of Chromatin-associated protein, yeastyeast

Gene CTF4, Length 2,784 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTF4YPR135W DSF1P0CX08 502 aa1.28□□□□□ -2.2
CTF4YPR135W YNR073CP0CX09 502 aa1.28□□□□□ -2.2
CTF4YPR135W GCN3P14741 305 aa1.28□□□□□ -2.2
CTF4YPR135W MDH2P22133 377 aa1.28□□□□□ -2.2
CTF4YPR135W YCR023CP25351 611 aa1.28□□□□□ -2.2
CTF4YPR135W YRA2P36036 203 aaKnown RBP RIP-Chip data1.28□□□□□ -2.2not detected
CTF4YPR135W SLM6P38343 150 aa1.28□□□□□ -2.2
CTF4YPR135W DOG1P38774 246 aa1.28□□□□□ -2.2
CTF4YPR135W HAC1P41546 238 aa1.28□□□□□ -2.2
CTF4YPR135W MRH4P53166 561 aa1.28□□□□□ -2.2
CTF4YPR135W GTR2P53290 341 aa1.28□□□□□ -2.2
CTF4YPR135W HSK3P69852 69 aa1.28□□□□□ -2.2
CTF4YPR135W YMR244WQ04018 355 aa1.28□□□□□ -2.2
CTF4YPR135W FSH2Q05015 223 aa1.28□□□□□ -2.2
CTF4YPR135W NNT1Q05874 261 aa1.28□□□□□ -2.2
CTF4YPR135W YLR177WQ06251 628 aa1.28□□□□□ -2.2
CTF4YPR135W YPR127WQ06494 345 aa1.28□□□□□ -2.2
CTF4YPR135W NSL1Q12143 216 aa1.28□□□□□ -2.2
CTF4YPR135W YPL245WQ12179 454 aaKnown RBP1.28□□□□□ -2.2
CTF4YPR135W TFC7Q12415 435 aa1.28□□□□□ -2.2
CTF4YPR135W NOT5Q12514 560 aaPredicted RBP1.28□□□□□ -2.2
CTF4YPR135W YCL021W-AQ96VH3 125 aa1.28□□□□□ -2.2
CTF4YPR135W NSP1P14907 823 aaKnown RBP1.27□□□□□ -2.21
CTF4YPR135W URA10P30402 227 aa1.27□□□□□ -2.21
CTF4YPR135W CAF4P36130 643 aa1.27□□□□□ -2.21
CTF4YPR135W TRR2P38816 342 aa1.27□□□□□ -2.21
CTF4YPR135W AST2P39945 430 aaKnown RBP1.27□□□□□ -2.21
CTF4YPR135W RRG9P40156 214 aa1.27□□□□□ -2.21
CTF4YPR135W FMP32P43557 207 aa1.27□□□□□ -2.21
CTF4YPR135W AIM25P47140 327 aa1.27□□□□□ -2.21
CTF4YPR135W CLD1P53264 445 aa1.27□□□□□ -2.21
CTF4YPR135W YNL184CP53876 108 aa1.27□□□□□ -2.21
CTF4YPR135W APJ1P53940 528 aa1.27□□□□□ -2.21
CTF4YPR135W RMI1Q02685 241 aa1.27□□□□□ -2.21
CTF4YPR135W DTD1Q07648 150 aaKnown RBP1.27□□□□□ -2.21
CTF4YPR135W IRC25Q07951 179 aa1.27□□□□□ -2.21
CTF4YPR135W YOL160WQ08321 113 aa1.27□□□□□ -2.21
CTF4YPR135W YPR011CQ12251 326 aa1.27□□□□□ -2.21
CTF4YPR135W RDI1Q12434 202 aa1.27□□□□□ -2.21
CTF4YPR135W YHR214C-EQ8TGK0 99 aa1.27□□□□□ -2.21
CTF4YPR135W YBR298C-AQ8TGK4 73 aa1.27□□□□□ -2.21
CTF4YPR135W POP7P38291 140 aa1.27□□□□□ -2.21
CTF4YPR135W GLR1P41921 483 aaKnown RBP1.27□□□□□ -2.21
CTF4YPR135W PRM8P53174 237 aa1.27□□□□□ -2.21
CTF4YPR135W YGR018CP53211 109 aa1.27□□□□□ -2.21
CTF4YPR135W CWC25P53854 179 aaKnown RBP1.27□□□□□ -2.21
CTF4YPR135W AAH1P53909 347 aa1.27□□□□□ -2.21
CTF4YPR135W ACT1P60010 375 aaKnown RBP1.27□□□□□ -2.21
CTF4YPR135W IGO2Q9P305 131 aa1.27□□□□□ -2.21
CTF4YPR135W PET54P10834 293 aa1.26□□□□□ -2.21
CTF4YPR135W BGL2P15703 313 aaKnown RBP1.26□□□□□ -2.21
CTF4YPR135W RPB5P20434 215 aa1.26□□□□□ -2.21
CTF4YPR135W TRX3P25372 127 aa1.26□□□□□ -2.21
CTF4YPR135W TCA17P32613 152 aa1.26□□□□□ -2.21
CTF4YPR135W APS1P35181 156 aa1.26□□□□□ -2.21
CTF4YPR135W LSM12P38828 187 aaKnown RBP1.26□□□□□ -2.21
CTF4YPR135W NVJ1P38881 321 aa1.26□□□□□ -2.21
CTF4YPR135W OXA1P39952 402 aa1.26□□□□□ -2.21
CTF4YPR135W YJR111CP47148 283 aaKnown RBP1.26□□□□□ -2.21
CTF4YPR135W SDT1P53078 280 aa1.26□□□□□ -2.21
CTF4YPR135W ERV29P53337 310 aa1.26□□□□□ -2.21
CTF4YPR135W HST4P53688 370 aa1.26□□□□□ -2.21
CTF4YPR135W ABF2Q02486 183 aa1.26□□□□□ -2.21
CTF4YPR135W YLR053CQ12026 108 aa1.26□□□□□ -2.21
CTF4YPR135W ERV2Q12284 196 aa1.26□□□□□ -2.21
CTF4YPR135W TRM10Q12400 293 aa1.26□□□□□ -2.21
CTF4YPR135W CAM1P29547 415 aaKnown RBP1.26□□□□□ -2.21
CTF4YPR135W LDS1P31379 325 aa1.26□□□□□ -2.21
CTF4YPR135W YET1P35723 206 aa1.26□□□□□ -2.21
CTF4YPR135W FMP23P38231 175 aa1.26□□□□□ -2.21
CTF4YPR135W YNL208WP40159 199 aaKnown RBP1.26□□□□□ -2.21
CTF4YPR135W FMP48P53233 369 aa1.26□□□□□ -2.21
CTF4YPR135W LSM7P53905 115 aaKnown RBP1.26□□□□□ -2.21
CTF4YPR135W COG5P53951 403 aa1.26□□□□□ -2.21
CTF4YPR135W LIP2Q06005 328 aa1.26□□□□□ -2.21
CTF4YPR135W SYC1Q08553 188 aaPredicted RBP1.26□□□□□ -2.21
CTF4YPR135W YLR050CQ12155 161 aaKnown RBP1.26□□□□□ -2.21
CTF4YPR135W TIM22Q12328 207 aa1.26□□□□□ -2.21
CTF4YPR135W IZH2Q12442 317 aa1.26□□□□□ -2.21
CTF4YPR135W YBL112CQ3E7Y4 105 aa1.26□□□□□ -2.21
CTF4YPR135W YMR316C-AI2HB70 103 aa1.25□□□□□ -2.21
CTF4YPR135W RPS28BP0C0X0 67 aaKnown RBP1.25□□□□□ -2.21
CTF4YPR135W SCO1P23833 295 aa1.25□□□□□ -2.21
CTF4YPR135W IMP1P28627 190 aa1.25□□□□□ -2.21
CTF4YPR135W YBL081WP38180 368 aaKnown RBP1.25□□□□□ -2.21
CTF4YPR135W BDH1P39714 382 aa1.25□□□□□ -2.21
CTF4YPR135W EDC2P40023 145 aaPredicted RBP1.25□□□□□ -2.21
CTF4YPR135W STB1P42845 420 aa1.25□□□□□ -2.21
CTF4YPR135W MOG1P47123 218 aa1.25□□□□□ -2.21
CTF4YPR135W SOL1P50278 321 aa1.25□□□□□ -2.21
CTF4YPR135W YGR050CP53231 118 aa1.25□□□□□ -2.21
CTF4YPR135W YPL039WQ03080 316 aa1.25□□□□□ -2.21
CTF4YPR135W ECM11Q04110 302 aa1.25□□□□□ -2.21
CTF4YPR135W ATG5Q12380 294 aa1.25□□□□□ -2.21
CTF4YPR135W RPS28AQ3E7X9 67 aaPredicted RBP1.25□□□□□ -2.21
CTF4YPR135W HSP26P15992 214 aaKnown RBP RIP-Chip data1.25□□□□□ -2.21not detected
CTF4YPR135W MGT1P26188 188 aa1.25□□□□□ -2.21
CTF4YPR135W ERG24P32462 438 aaKnown RBP1.25□□□□□ -2.21
CTF4YPR135W IRC22P40006 225 aa1.25□□□□□ -2.21
CTF4YPR135W PDS1P40316 373 aaPredicted RBP1.25□□□□□ -2.21
Retrieved 100 of 5,963 RNA–protein pairs in 401.1 ms