RNA–Protein interactions for RNA: YPR103W

PRE2, Transcript of Beta 5 subunit of the 20S proteasome, yeastyeast

Gene PRE2, Length 864 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE2YPR103W HMLALPHA2P0CY09 210 aa3.08□□□□□ -1.92
PRE2YPR103W MER1P16523 270 aa3.08□□□□□ -1.92
PRE2YPR103W PET9P18239 318 aaKnown RBP3.08□□□□□ -1.92
PRE2YPR103W RFC4P40339 323 aaKnown RBP3.08□□□□□ -1.92
PRE2YPR103W AYR1P40471 297 aa3.08□□□□□ -1.92
PRE2YPR103W MRPS17Q03246 237 aaPredicted RBP3.08□□□□□ -1.92
PRE2YPR103W TLG1Q03322 224 aa3.08□□□□□ -1.92
PRE2YPR103W USB1Q12208 290 aaKnown RBP3.08□□□□□ -1.92
PRE2YPR103W TOM1Q03280 3268 aa3.08□□□□□ -1.92
PRE2YPR103W DDI2P0CH63 225 aa3.07□□□□□ -1.92
PRE2YPR103W DDI3P0CH64 225 aa3.07□□□□□ -1.92
PRE2YPR103W PTM1P32857 523 aa3.07□□□□□ -1.92
PRE2YPR103W MRPL28P36527 147 aa3.07□□□□□ -1.92
PRE2YPR103W PGD1P40356 397 aa3.07□□□□□ -1.92
PRE2YPR103W RPL33BP41056 107 aaKnown RBP3.07□□□□□ -1.92
PRE2YPR103W SWP1Q02795 286 aa3.07□□□□□ -1.92
PRE2YPR103W YMR226CQ05016 267 aaKnown RBP3.07□□□□□ -1.92
PRE2YPR103W ICE2P40499 491 aa3.06□□□□□ -1.92
PRE2YPR103W YRB2P40517 327 aa3.06□□□□□ -1.92
PRE2YPR103W LSM7P53905 115 aaKnown RBP3.06□□□□□ -1.92
PRE2YPR103W YPL162CQ12042 273 aa3.06□□□□□ -1.92
PRE2YPR103W GET4Q12125 312 aa3.06□□□□□ -1.92
PRE2YPR103W MRPL17P36528 281 aa3.05□□□□□ -1.92
PRE2YPR103W DOC1P53068 250 aa3.05□□□□□ -1.92
PRE2YPR103W CGR1P53188 120 aa3.05□□□□□ -1.92
PRE2YPR103W NOP19P53317 196 aaPredicted RBP3.05□□□□□ -1.92
PRE2YPR103W YDR249CQ03787 373 aa3.05□□□□□ -1.92
PRE2YPR103W YNG1Q08465 219 aa3.05□□□□□ -1.92
PRE2YPR103W ABP140Q08641 628 aaKnown RBP3.05□□□□□ -1.92
PRE2YPR103W BOL1Q3E793 110 aa3.05□□□□□ -1.92
PRE2YPR103W YFR032C-BQ8TGU2 87 aa3.05□□□□□ -1.92
PRE2YPR103W FAS2P19097 1887 aaKnown RBP3.05□□□□□ -1.92
PRE2YPR103W UTP10P42945 1769 aaKnown RBP3.05□□□□□ -1.92
PRE2YPR103W TIM9O74700 87 aa3.04□□□□□ -1.92
PRE2YPR103W RMD6P39975 231 aa3.04□□□□□ -1.92
PRE2YPR103W ERG25P53045 309 aa3.04□□□□□ -1.92
PRE2YPR103W BOL2P53082 120 aa3.04□□□□□ -1.92
PRE2YPR103W YOL160WQ08321 113 aa3.04□□□□□ -1.92
PRE2YPR103W QCR7P00128 127 aa3.03□□□□□ -1.92
PRE2YPR103W RPL27BP0C2H7 136 aaKnown RBP3.03□□□□□ -1.92
PRE2YPR103W SVP26P38869 228 aa3.03□□□□□ -1.92
PRE2YPR103W AGE2P40529 298 aa3.03□□□□□ -1.92
PRE2YPR103W TIR3P40552 269 aa3.03□□□□□ -1.92
PRE2YPR103W COG5P53951 403 aa3.03□□□□□ -1.92
PRE2YPR103W GGA1Q06336 557 aa3.03□□□□□ -1.92
PRE2YPR103W PMD1P32634 1753 aa3.02□□□□□ -1.93
PRE2YPR103W KSS1P14681 368 aa3.02□□□□□ -1.93
PRE2YPR103W MRPS28P21771 286 aa3.01□□□□□ -1.93
PRE2YPR103W SKG1P36169 355 aa3.01□□□□□ -1.93
PRE2YPR103W TRM5P38793 499 aa3.01□□□□□ -1.93
PRE2YPR103W AST2P39945 430 aaKnown RBP3.01□□□□□ -1.93
PRE2YPR103W PEP8P40335 379 aa3.01□□□□□ -1.93
PRE2YPR103W YNR077CP53758 84 aa3.01□□□□□ -1.93
PRE2YPR103W TSC3Q3E790 80 aa3.01□□□□□ -1.93
PRE2YPR103W UMP1P38293 148 aa3□□□□□ -1.93
PRE2YPR103W DSE2P38844 325 aa3□□□□□ -1.93
PRE2YPR103W GET1P53192 235 aa3□□□□□ -1.93
PRE2YPR103W LYS2P07702 1392 aa3□□□□□ -1.93
PRE2YPR103W HKR1P41809 1802 aa2.99□□□□□ -1.93
PRE2YPR103W RPL25P04456 142 aaKnown RBP2.99□□□□□ -1.93
PRE2YPR103W RPB3P16370 318 aaKnown RBP2.99□□□□□ -1.93
PRE2YPR103W APA2P22108 325 aa2.99□□□□□ -1.93
PRE2YPR103W LSM4P40070 187 aaKnown RBP2.99□□□□□ -1.93
PRE2YPR103W AIM25P47140 327 aa2.99□□□□□ -1.93
PRE2YPR103W GSC2P40989 1895 aa2.99□□□□□ -1.93
PRE2YPR103W PDR18P53756 1333 aa2.98□□□□□ -1.93
PRE2YPR103W ATP15P21306 62 aa2.98□□□□□ -1.93
PRE2YPR103W MDH2P22133 377 aa2.98□□□□□ -1.93
PRE2YPR103W GVP36P40531 326 aaKnown RBP2.98□□□□□ -1.93
PRE2YPR103W BAT2P47176 376 aaKnown RBP2.98□□□□□ -1.93
PRE2YPR103W MDM32Q12171 622 aa2.98□□□□□ -1.93
PRE2YPR103W MLP1Q02455 1875 aaKnown RBP2.97□□□□□ -1.93
PRE2YPR103W YPK2P18961 677 aa2.97□□□□□ -1.93
PRE2YPR103W MAG1P22134 296 aaKnown RBP2.97□□□□□ -1.93
PRE2YPR103W BET1P22804 142 aa2.97□□□□□ -1.93
PRE2YPR103W YNL217WP40152 326 aa2.97□□□□□ -1.93
PRE2YPR103W SML1Q04964 104 aa2.97□□□□□ -1.93
PRE2YPR103W URA5P13298 226 aaKnown RBP2.96□□□□□ -1.94
PRE2YPR103W HMF1P40037 129 aaKnown RBP2.96□□□□□ -1.94
PRE2YPR103W ERG10P41338 398 aaKnown RBP2.96□□□□□ -1.94
PRE2YPR103W YET1P35723 206 aa2.95□□□□□ -1.94
PRE2YPR103W MMS2P53152 137 aa2.95□□□□□ -1.94
PRE2YPR103W FSF1Q12029 327 aaKnown RBP2.95□□□□□ -1.94
PRE2YPR103W MRS1P07266 363 aa2.94□□□□□ -1.94
PRE2YPR103W RPL27AP0C2H6 136 aaKnown RBP2.94□□□□□ -1.94
PRE2YPR103W FZF1P32805 299 aa2.94□□□□□ -1.94
PRE2YPR103W AVT2P39981 480 aa2.94□□□□□ -1.94
PRE2YPR103W GPM2Q12008 311 aa2.94□□□□□ -1.94
PRE2YPR103W CPA1P07258 411 aaKnown RBP2.93□□□□□ -1.94
PRE2YPR103W ADE1P27616 306 aa2.93□□□□□ -1.94
PRE2YPR103W SNC2P33328 115 aa2.93□□□□□ -1.94
PRE2YPR103W YFR054CP43622 192 aa2.93□□□□□ -1.94
PRE2YPR103W YDR274CP87283 123 aa2.93□□□□□ -1.94
PRE2YPR103W FLO1P32768 1537 aa2.93□□□□□ -1.94
PRE2YPR103W SIR2P06700 562 aa2.92□□□□□ -1.94
PRE2YPR103W RAD51P25454 400 aa2.92□□□□□ -1.94
PRE2YPR103W VTC1P40046 129 aaRIP-Chip data2.92□□□□□ -1.94not detected
PRE2YPR103W CNB1P25296 175 aa2.91□□□□□ -1.94
PRE2YPR103W ASF2P32448 525 aaPredicted RBP2.91□□□□□ -1.94
PRE2YPR103W OPY1P38271 328 aa2.91□□□□□ -1.94
Retrieved 100 of 5,963 RNA–protein pairs in 22.6 ms