RNA–Protein interactions for RNA: YPL174C

NIP100, Transcript of Large subunit of the dynactin complex, yeastyeast

Gene NIP100, Length 2,607 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NIP100YPL174C IDH1P28834 360 aaKnown RBP RIP-Chip data0.24□□□□□ -2.37not detected
NIP100YPL174C AHT1P29589 182 aa0.24□□□□□ -2.37
NIP100YPL174C YNL247WP53852 767 aaKnown RBP0.24□□□□□ -2.37
NIP100YPL174C HNT1Q04344 158 aaKnown RBP0.24□□□□□ -2.37
NIP100YPL174C YOR097CQ12274 175 aaPredicted RBP0.24□□□□□ -2.37
NIP100YPL174C SPO14P36126 1683 aa0.24□□□□□ -2.37
NIP100YPL174C RIM15P43565 1770 aa0.23□□□□□ -2.37
NIP100YPL174C FMP49A0A023PZB3 126 aa0.23□□□□□ -2.37
NIP100YPL174C MAG1P22134 296 aaKnown RBP0.23□□□□□ -2.37
NIP100YPL174C SEC17P32602 292 aa0.23□□□□□ -2.37
NIP100YPL174C BMH2P34730 273 aaKnown RBP0.23□□□□□ -2.37
NIP100YPL174C FUS2Q05670 677 aa0.23□□□□□ -2.37
NIP100YPL174C PRP11Q07350 266 aaPredicted RBP0.23□□□□□ -2.37
NIP100YPL174C MMS22Q06164 1454 aa0.23□□□□□ -2.37
NIP100YPL174C RPB3P16370 318 aaKnown RBP0.23□□□□□ -2.37
NIP100YPL174C RPT5P33297 434 aaKnown RBP0.23□□□□□ -2.37
NIP100YPL174C PAN3P36102 679 aaPredicted RBP0.23□□□□□ -2.37
NIP100YPL174C RPC17P47076 161 aa0.23□□□□□ -2.37
NIP100YPL174C RPO31P04051 1460 aa0.23□□□□□ -2.37
NIP100YPL174C RPO26P20435 155 aa0.22□□□□□ -2.37
NIP100YPL174C HMF1P40037 129 aaKnown RBP0.22□□□□□ -2.37
NIP100YPL174C YIL102CP40488 101 aa0.22□□□□□ -2.37
NIP100YPL174C ARP3P47117 449 aaKnown RBP0.22□□□□□ -2.37
NIP100YPL174C YLR283WQ05867 314 aa0.22□□□□□ -2.37
NIP100YPL174C YOL160WQ08321 113 aa0.22□□□□□ -2.37
NIP100YPL174C ECM5Q03214 1411 aa0.22□□□□□ -2.37
NIP100YPL174C SPO13P23624 291 aa0.22□□□□□ -2.37
NIP100YPL174C SPS18P32572 300 aa0.22□□□□□ -2.37
NIP100YPL174C TCA17P32613 152 aa0.22□□□□□ -2.37
NIP100YPL174C YFH7P43591 353 aa0.22□□□□□ -2.37
NIP100YPL174C YDR249CQ03787 373 aa0.22□□□□□ -2.37
NIP100YPL174C DGA1Q08650 418 aa0.22□□□□□ -2.37
NIP100YPL174C POR1P04840 283 aaKnown RBP0.21□□□□□ -2.38
NIP100YPL174C STE18P18852 110 aa0.21□□□□□ -2.38
NIP100YPL174C YER034WP40022 185 aaKnown RBP0.21□□□□□ -2.38
NIP100YPL174C YNL194CP40169 301 aa0.21□□□□□ -2.38
NIP100YPL174C YGR050CP53231 118 aa0.21□□□□□ -2.38
NIP100YPL174C MET31Q03081 177 aa0.21□□□□□ -2.38
NIP100YPL174C YMR099CQ03161 297 aaKnown RBP0.21□□□□□ -2.38
NIP100YPL174C IRC23Q08416 157 aa0.21□□□□□ -2.38
NIP100YPL174C ATP15P21306 62 aa0.21□□□□□ -2.38
NIP100YPL174C CBT1P36038 271 aaPredicted RBP0.21□□□□□ -2.38
NIP100YPL174C SBH2P52871 88 aa0.21□□□□□ -2.38
NIP100YPL174C LSM7P53905 115 aaKnown RBP0.21□□□□□ -2.38
NIP100YPL174C STU1P38198 1513 aa0.21□□□□□ -2.38
NIP100YPL174C COX8P04039 78 aa0.2□□□□□ -2.38
NIP100YPL174C SFK1P35735 353 aa0.2□□□□□ -2.38
NIP100YPL174C VMA22P38784 181 aa0.2□□□□□ -2.38
NIP100YPL174C YAR064WP39563 99 aa0.2□□□□□ -2.38
NIP100YPL174C AIM25P47140 327 aa0.2□□□□□ -2.38
NIP100YPL174C PDR17P53844 350 aa0.2□□□□□ -2.38
NIP100YPL174C YPK2P18961 677 aa0.2□□□□□ -2.38
NIP100YPL174C ARO7P32178 256 aa0.2□□□□□ -2.38
NIP100YPL174C YER085CP40058 173 aa0.2□□□□□ -2.38
NIP100YPL174C FIT2Q08906 153 aa0.2□□□□□ -2.38
NIP100YPL174C YPR013CQ12145 317 aa0.2□□□□□ -2.38
NIP100YPL174C DYN1P36022 4092 aa0.19□□□□□ -2.38
NIP100YPL174C GSP2P32836 220 aaKnown RBP0.19□□□□□ -2.38
NIP100YPL174C COG5P53951 403 aa0.19□□□□□ -2.38
NIP100YPL174C GGA1Q06336 557 aa0.19□□□□□ -2.38
NIP100YPL174C YLR036CQ07986 203 aa0.19□□□□□ -2.38
NIP100YPL174C ODC2Q99297 307 aa0.19□□□□□ -2.38
NIP100YPL174C SRB8P25648 1427 aa0.19□□□□□ -2.38
NIP100YPL174C SNQ2P32568 1501 aaKnown RBP0.19□□□□□ -2.38
NIP100YPL174C MER1P16523 270 aa0.19□□□□□ -2.38
NIP100YPL174C YHL018WP38744 120 aaPredicted RBP0.19□□□□□ -2.38
NIP100YPL174C HHT1P61830 136 aa0.19□□□□□ -2.38
NIP100YPL174C YMR252CQ04814 134 aa0.19□□□□□ -2.38
NIP100YPL174C FYV12Q08559 129 aa0.19□□□□□ -2.38
NIP100YPL174C YKL183C-AQ3E765 70 aa0.19□□□□□ -2.38
NIP100YPL174C TAF2P23255 1407 aa0.19□□□□□ -2.38
NIP100YPL174C YAR023CD6VPM8 179 aa0.18□□□□□ -2.38
NIP100YPL174C SEN2P16658 377 aa0.18□□□□□ -2.38
NIP100YPL174C COQ1P18900 473 aa0.18□□□□□ -2.38
NIP100YPL174C RPB7P34087 171 aa0.18□□□□□ -2.38
NIP100YPL174C HPA3P39979 161 aa0.18□□□□□ -2.38
NIP100YPL174C ERG28P40030 148 aa0.18□□□□□ -2.38
NIP100YPL174C YRB1P41920 201 aaKnown RBP0.18□□□□□ -2.38
NIP100YPL174C YFL051CP43552 160 aa0.18□□□□□ -2.38
NIP100YPL174C YLR460CP54007 376 aa0.18□□□□□ -2.38
NIP100YPL174C YOL014WQ08110 124 aa0.18□□□□□ -2.38
NIP100YPL174C ADF1Q2V2Q1 113 aa0.18□□□□□ -2.38
NIP100YPL174C TY1B-NL2Q99337 1749 aaKnown RBP0.18□□□□□ -2.38
NIP100YPL174C GEA1P47102 1408 aaPredicted RBP0.18□□□□□ -2.38
NIP100YPL174C RKR1Q04781 1562 aa0.18□□□□□ -2.38
NIP100YPL174C YEA4P40004 342 aa0.18□□□□□ -2.38
NIP100YPL174C CUP9P41817 306 aa0.18□□□□□ -2.38
NIP100YPL174C DIG2Q03373 323 aaKnown RBP0.18□□□□□ -2.38
NIP100YPL174C COA3Q3E7B2 85 aa0.18□□□□□ -2.38
NIP100YPL174C PAM17P36147 197 aa0.17□□□□□ -2.38
NIP100YPL174C YEL008WP40001 126 aa0.17□□□□□ -2.38
NIP100YPL174C RPS29AP41057 56 aaKnown RBP0.17□□□□□ -2.38
NIP100YPL174C MGA1P53050 456 aa0.17□□□□□ -2.38
NIP100YPL174C MPC3P53311 146 aa0.17□□□□□ -2.38
NIP100YPL174C SHH3Q04487 196 aa0.17□□□□□ -2.38
NIP100YPL174C TEL1P38110 2787 aa0.17□□□□□ -2.38
NIP100YPL174C PRP18P33411 251 aaPredicted RBP0.17□□□□□ -2.38
NIP100YPL174C MTW1P39731 289 aa0.17□□□□□ -2.38
NIP100YPL174C YER134CP40081 178 aa0.17□□□□□ -2.38
NIP100YPL174C RTR1P40084 226 aaPredicted RBP0.17□□□□□ -2.38
Retrieved 100 of 5,963 RNA–protein pairs in 19.2 ms