RNA–Protein interactions for RNA: YPL089C

RLM1, Transcript of MADS-box transcription factor, yeast

Gene RLM1, Length 2,031 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RLM1	YPL089C	FCY21	P40039	528 aa		1.05	□□□□□ -2.24
RLM1	YPL089C	YNL217W	P40152	326 aa		1.05	□□□□□ -2.24
RLM1	YPL089C	YJL027C	P47063	138 aa	Predicted RBP	1.05	□□□□□ -2.24
RLM1	YPL089C	CYT2	Q00873	224 aa		1.05	□□□□□ -2.24
RLM1	YPL089C	GPI17	Q04080	534 aa		1.05	□□□□□ -2.24
RLM1	YPL089C	MEU1	Q07938	337 aa	Known RBP RIP-Chip data	1.05	□□□□□ -2.24	not detected
RLM1	YPL089C	PEX11	Q12462	236 aa		1.05	□□□□□ -2.24
RLM1	YPL089C	YIL177C	P40434	1758 aa		1.05	□□□□□ -2.24
RLM1	YPL089C	YJL225C	P40889	1758 aa		1.05	□□□□□ -2.24
RLM1	YPL089C	POR1	P04840	283 aa	Known RBP	1.05	□□□□□ -2.24
RLM1	YPL089C	QCR2	P07257	368 aa		1.05	□□□□□ -2.24
RLM1	YPL089C	DDI2	P0CH63	225 aa		1.05	□□□□□ -2.24
RLM1	YPL089C	DDI3	P0CH64	225 aa		1.05	□□□□□ -2.24
RLM1	YPL089C	PAN3	P36102	679 aa	Predicted RBP	1.05	□□□□□ -2.24
RLM1	YPL089C	SVP26	P38869	228 aa		1.05	□□□□□ -2.24
RLM1	YPL089C	ERG25	P53045	309 aa		1.05	□□□□□ -2.24
RLM1	YPL089C	NUP49	Q02199	472 aa		1.05	□□□□□ -2.24
RLM1	YPL089C	YMR099C	Q03161	297 aa	Known RBP	1.05	□□□□□ -2.24
RLM1	YPL089C	HPT1	Q04178	221 aa	Known RBP	1.05	□□□□□ -2.24
RLM1	YPL089C	DYN3	Q04949	312 aa		1.05	□□□□□ -2.24
RLM1	YPL089C	YPR014C	Q6B0W2	109 aa		1.05	□□□□□ -2.24
RLM1	YPL089C	YAR023C	D6VPM8	179 aa		1.04	□□□□□ -2.24
RLM1	YPL089C	SHE2	P36068	246 aa	Known RBP RIP-Chip data	1.04	□□□□□ -2.24	not detected
RLM1	YPL089C	AVT2	P39981	480 aa		1.04	□□□□□ -2.24
RLM1	YPL089C	VTC1	P40046	129 aa	RIP-Chip data	1.04	□□□□□ -2.24	not detected
RLM1	YPL089C	YER134C	P40081	178 aa		1.04	□□□□□ -2.24
RLM1	YPL089C	AGE2	P40529	298 aa		1.04	□□□□□ -2.24
RLM1	YPL089C	GPI14	P47088	403 aa	Known RBP	1.04	□□□□□ -2.24
RLM1	YPL089C	MPC3	P53311	146 aa		1.04	□□□□□ -2.24
RLM1	YPL089C	PLP1	Q04004	230 aa		1.04	□□□□□ -2.24
RLM1	YPL089C	NAT3	Q06504	195 aa		1.04	□□□□□ -2.24
RLM1	YPL089C	TVP38	P36164	337 aa		1.03	□□□□□ -2.24
RLM1	YPL089C	NRG2	P38082	220 aa		1.03	□□□□□ -2.24
RLM1	YPL089C	RFC2	P40348	353 aa		1.03	□□□□□ -2.24
RLM1	YPL089C	YFL019C	P43576	117 aa		1.03	□□□□□ -2.24
RLM1	YPL089C	TMA22	P47089	198 aa	Predicted RBP	1.03	□□□□□ -2.24
RLM1	YPL089C	EFM5	P53200	248 aa	Known RBP	1.03	□□□□□ -2.24
RLM1	YPL089C	YOR342C	Q12182	319 aa		1.03	□□□□□ -2.24
RLM1	YPL089C	ATG40	Q99325	256 aa		1.03	□□□□□ -2.24
RLM1	YPL089C	PDR18	P53756	1333 aa		1.03	□□□□□ -2.24
RLM1	YPL089C	YLR236C	A0A023PZG4	107 aa		1.03	□□□□□ -2.25
RLM1	YPL089C	CMD1	P06787	147 aa	Known RBP	1.03	□□□□□ -2.25
RLM1	YPL089C	YBR209W	P38311	105 aa		1.03	□□□□□ -2.25
RLM1	YPL089C	DSE2	P38844	325 aa		1.03	□□□□□ -2.25
RLM1	YPL089C	GAA1	P39012	614 aa		1.03	□□□□□ -2.25
RLM1	YPL089C	MTW1	P39731	289 aa		1.03	□□□□□ -2.25
RLM1	YPL089C	YGL235W	P53071	178 aa		1.03	□□□□□ -2.25
RLM1	YPL089C	HSK3	P69852	69 aa		1.03	□□□□□ -2.25
RLM1	YPL089C	VPS71	Q03433	280 aa		1.03	□□□□□ -2.25
RLM1	YPL089C	YLR053C	Q12026	108 aa		1.03	□□□□□ -2.25
RLM1	YPL089C	RDI1	Q12434	202 aa		1.03	□□□□□ -2.25
RLM1	YPL089C	YHR086W-A	Q3E746	53 aa		1.03	□□□□□ -2.25
RLM1	YPL089C	RPS28B	P0C0X0	67 aa	Known RBP	1.02	□□□□□ -2.25
RLM1	YPL089C	TIR1	P10863	254 aa		1.02	□□□□□ -2.25
RLM1	YPL089C	NSP1	P14907	823 aa	Known RBP	1.02	□□□□□ -2.25
RLM1	YPL089C	SPO13	P23624	291 aa		1.02	□□□□□ -2.25
RLM1	YPL089C	FZF1	P32805	299 aa		1.02	□□□□□ -2.25
RLM1	YPL089C	UBC6	P33296	250 aa	Predicted RBP	1.02	□□□□□ -2.25
RLM1	YPL089C	NSG1	P38837	291 aa		1.02	□□□□□ -2.25
RLM1	YPL089C	TVP23	P38962	199 aa		1.02	□□□□□ -2.25
RLM1	YPL089C	EDC3	P39998	551 aa	Known RBP	1.02	□□□□□ -2.25
RLM1	YPL089C	SOL1	P50278	321 aa		1.02	□□□□□ -2.25
RLM1	YPL089C	SHH3	Q04487	196 aa		1.02	□□□□□ -2.25
RLM1	YPL089C	SML1	Q04964	104 aa		1.02	□□□□□ -2.25
RLM1	YPL089C	FYV12	Q08559	129 aa		1.02	□□□□□ -2.25
RLM1	YPL089C	DGK1	Q12382	290 aa		1.02	□□□□□ -2.25
RLM1	YPL089C	YLR412C-A	Q3E742	68 aa		1.02	□□□□□ -2.25
RLM1	YPL089C	BOL1	Q3E793	110 aa		1.02	□□□□□ -2.25
RLM1	YPL089C	RPS28A	Q3E7X9	67 aa	Predicted RBP	1.02	□□□□□ -2.25
RLM1	YPL089C	MDH2	P22133	377 aa		1.01	□□□□□ -2.25
RLM1	YPL089C	DER1	P38307	211 aa		1.01	□□□□□ -2.25
RLM1	YPL089C	AYR1	P40471	297 aa		1.01	□□□□□ -2.25
RLM1	YPL089C	YFH7	P43591	353 aa		1.01	□□□□□ -2.25
RLM1	YPL089C	YFR054C	P43622	192 aa		1.01	□□□□□ -2.25
RLM1	YPL089C	TTI2	P47168	421 aa		1.01	□□□□□ -2.25
RLM1	YPL089C	SAY1	P53324	424 aa		1.01	□□□□□ -2.25
RLM1	YPL089C	POP3	P53833	195 aa	Predicted RBP	1.01	□□□□□ -2.25
RLM1	YPL089C	YMR295C	Q03559	197 aa		1.01	□□□□□ -2.25
RLM1	YPL089C	YDL180W	Q12301	547 aa		1.01	□□□□□ -2.25
RLM1	YPL089C	CPR5	P35176	225 aa		1.01	□□□□□ -2.25
RLM1	YPL089C	FIG1	P38224	298 aa		1.01	□□□□□ -2.25
RLM1	YPL089C	VMA22	P38784	181 aa		1.01	□□□□□ -2.25
RLM1	YPL089C	CUP9	P41817	306 aa		1.01	□□□□□ -2.25
RLM1	YPL089C	ERJ5	P43613	295 aa	Predicted RBP	1.01	□□□□□ -2.25
RLM1	YPL089C	KNH1	P50112	268 aa		1.01	□□□□□ -2.25
RLM1	YPL089C	MPA43	P53583	542 aa	Predicted RBP	1.01	□□□□□ -2.25
RLM1	YPL089C	BUD25	P85052	153 aa		1.01	□□□□□ -2.25
RLM1	YPL089C	CUE4	Q04201	117 aa	Predicted RBP	1.01	□□□□□ -2.25
RLM1	YPL089C	RAD28	Q12021	506 aa		1.01	□□□□□ -2.25
RLM1	YPL089C	NSL1	Q12143	216 aa		1.01	□□□□□ -2.25
RLM1	YPL089C	IDP1	P21954	428 aa	Known RBP	1	□□□□□ -2.25
RLM1	YPL089C	YCR023C	P25351	611 aa		1	□□□□□ -2.25
RLM1	YPL089C	TFC1	P32367	649 aa		1	□□□□□ -2.25
RLM1	YPL089C	PAM17	P36147	197 aa		1	□□□□□ -2.25
RLM1	YPL089C	CSH1	P38287	376 aa		1	□□□□□ -2.25
RLM1	YPL089C	SPC25	P40014	221 aa		1	□□□□□ -2.25
RLM1	YPL089C	NSA2	P40078	261 aa	Known RBP	1	□□□□□ -2.25
RLM1	YPL089C	PEP8	P40335	379 aa		1	□□□□□ -2.25
RLM1	YPL089C	SBH1	P52870	82 aa		1	□□□□□ -2.25
RLM1	YPL089C	YGL101W	P53144	215 aa		1	□□□□□ -2.25

Retrieved 100 of 5,963 RNA–protein pairs in 15.9 ms