RNA–Protein interactions for RNA: YOR036W

PEP12, Transcript of Target membrane receptor (t-SNARE), yeastyeast

Gene PEP12, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEP12YOR036W RPS24BP0CX32 135 aaKnown RBP1.61□□□□□ -2.15
PEP12YOR036W AHC2P25649 128 aa1.61□□□□□ -2.15
PEP12YOR036W ACP1P32463 125 aa1.61□□□□□ -2.15
PEP12YOR036W SRP102P36057 244 aaPredicted RBP1.61□□□□□ -2.15
PEP12YOR036W PAN3P36102 679 aaPredicted RBP1.61□□□□□ -2.15
PEP12YOR036W NRG2P38082 220 aa1.61□□□□□ -2.15
PEP12YOR036W YHR022CP38763 256 aa1.61□□□□□ -2.15
PEP12YOR036W NVJ1P38881 321 aa1.61□□□□□ -2.15
PEP12YOR036W AIM2P39721 246 aa1.61□□□□□ -2.15
PEP12YOR036W YEA4P40004 342 aa1.61□□□□□ -2.15
PEP12YOR036W LSM4P40070 187 aaKnown RBP1.61□□□□□ -2.15
PEP12YOR036W YER134CP40081 178 aa1.61□□□□□ -2.15
PEP12YOR036W SBH2P52871 88 aa1.61□□□□□ -2.15
PEP12YOR036W ERG25P53045 309 aa1.61□□□□□ -2.15
PEP12YOR036W YNR077CP53758 84 aa1.61□□□□□ -2.15
PEP12YOR036W YDR274CP87283 123 aa1.61□□□□□ -2.15
PEP12YOR036W CYT2Q00873 224 aa1.61□□□□□ -2.15
PEP12YOR036W NUP49Q02199 472 aa1.61□□□□□ -2.15
PEP12YOR036W AIM34Q03673 198 aa1.61□□□□□ -2.15
PEP12YOR036W HPT1Q04178 221 aaKnown RBP1.61□□□□□ -2.15
PEP12YOR036W YLR053CQ12026 108 aa1.61□□□□□ -2.15
PEP12YOR036W PEX11Q12462 236 aa1.61□□□□□ -2.15
PEP12YOR036W ATG40Q99325 256 aa1.61□□□□□ -2.15
PEP12YOR036W PDR18P53756 1333 aa1.61□□□□□ -2.15
PEP12YOR036W FKS1P38631 1876 aaKnown RBP1.6□□□□□ -2.15
PEP12YOR036W CMD1P06787 147 aaKnown RBP1.6□□□□□ -2.15
PEP12YOR036W CPA1P07258 411 aaKnown RBP1.6□□□□□ -2.15
PEP12YOR036W SEC14P24280 304 aaKnown RBP1.6□□□□□ -2.15
PEP12YOR036W YNL217WP40152 326 aa1.6□□□□□ -2.15
PEP12YOR036W MPC3P53311 146 aa1.6□□□□□ -2.15
PEP12YOR036W PLP1Q04004 230 aa1.6□□□□□ -2.15
PEP12YOR036W SHH4Q06236 168 aa1.6□□□□□ -2.15
PEP12YOR036W NSL1Q12143 216 aa1.6□□□□□ -2.15
PEP12YOR036W MPD1Q12404 318 aaKnown RBP1.6□□□□□ -2.15
PEP12YOR036W PET20Q99373 253 aa1.6□□□□□ -2.15
PEP12YOR036W YAR023CD6VPM8 179 aa1.59□□□□□ -2.15
PEP12YOR036W FZF1P32805 299 aa1.59□□□□□ -2.15
PEP12YOR036W EDC3P39998 551 aaKnown RBP1.59□□□□□ -2.15
PEP12YOR036W SOK1P40317 901 aa1.59□□□□□ -2.15
PEP12YOR036W AGE2P40529 298 aa1.59□□□□□ -2.15
PEP12YOR036W LSM1P47017 172 aaKnown RBP1.59□□□□□ -2.15
PEP12YOR036W EAF6P47128 113 aa1.59□□□□□ -2.15
PEP12YOR036W MAK3Q03503 176 aa1.59□□□□□ -2.15
PEP12YOR036W GPI17Q04080 534 aa1.59□□□□□ -2.15
PEP12YOR036W NAT3Q06504 195 aa1.59□□□□□ -2.15
PEP12YOR036W RDI1Q12434 202 aa1.59□□□□□ -2.15
PEP12YOR036W YPR014CQ6B0W2 109 aa1.59□□□□□ -2.15
PEP12YOR036W YIL177CP40434 1758 aa1.59□□□□□ -2.16
PEP12YOR036W YJL225CP40889 1758 aa1.59□□□□□ -2.16
PEP12YOR036W POR1P04840 283 aaKnown RBP1.58□□□□□ -2.16
PEP12YOR036W YKL102CP34249 101 aa1.58□□□□□ -2.16
PEP12YOR036W TVP38P36164 337 aa1.58□□□□□ -2.16
PEP12YOR036W YAP3P38749 330 aa1.58□□□□□ -2.16
PEP12YOR036W DSE2P38844 325 aa1.58□□□□□ -2.16
PEP12YOR036W VTC1P40046 129 aaRIP-Chip data1.58□□□□□ -2.16not detected
PEP12YOR036W AYR1P40471 297 aa1.58□□□□□ -2.16
PEP12YOR036W YFR054CP43622 192 aa1.58□□□□□ -2.16
PEP12YOR036W NQM1P53228 333 aaPredicted RBP1.58□□□□□ -2.16
PEP12YOR036W YOL014WQ08110 124 aa1.58□□□□□ -2.16
PEP12YOR036W YLR412C-AQ3E742 68 aa1.58□□□□□ -2.16
PEP12YOR036W BOL1Q3E793 110 aa1.58□□□□□ -2.16
PEP12YOR036W PET54P10834 293 aa1.57□□□□□ -2.16
PEP12YOR036W PHO85P17157 305 aa1.57□□□□□ -2.16
PEP12YOR036W MDH2P22133 377 aa1.57□□□□□ -2.16
PEP12YOR036W SPO13P23624 291 aa1.57□□□□□ -2.16
PEP12YOR036W YBR209WP38311 105 aa1.57□□□□□ -2.16
PEP12YOR036W NSG1P38837 291 aa1.57□□□□□ -2.16
PEP12YOR036W GAA1P39012 614 aa1.57□□□□□ -2.16
PEP12YOR036W AVT2P39981 480 aa1.57□□□□□ -2.16
PEP12YOR036W YFL019CP43576 117 aa1.57□□□□□ -2.16
PEP12YOR036W MPA43P53583 542 aaPredicted RBP1.57□□□□□ -2.16
PEP12YOR036W POP3P53833 195 aaPredicted RBP1.57□□□□□ -2.16
PEP12YOR036W YDC1Q02896 317 aa1.57□□□□□ -2.16
PEP12YOR036W YDR476CQ03362 224 aa1.57□□□□□ -2.16
PEP12YOR036W SML1Q04964 104 aa1.57□□□□□ -2.16
PEP12YOR036W SPC2Q04969 178 aa1.57□□□□□ -2.16
PEP12YOR036W YHR086W-AQ3E746 53 aa1.57□□□□□ -2.16
PEP12YOR036W YML100W-AQ8TGT0 57 aa1.57□□□□□ -2.16
PEP12YOR036W YLR236CA0A023PZG4 107 aa1.56□□□□□ -2.16
PEP12YOR036W BUB2P26448 306 aaPredicted RBP1.56□□□□□ -2.16
PEP12YOR036W POP7P38291 140 aa1.56□□□□□ -2.16
PEP12YOR036W PEP8P40335 379 aa1.56□□□□□ -2.16
PEP12YOR036W BUD25P85052 153 aa1.56□□□□□ -2.16
PEP12YOR036W YMR099CQ03161 297 aaKnown RBP1.56□□□□□ -2.16
PEP12YOR036W YPR127WQ06494 345 aa1.56□□□□□ -2.16
PEP12YOR036W ANT1Q06497 328 aa1.56□□□□□ -2.16
PEP12YOR036W YOR342CQ12182 319 aa1.56□□□□□ -2.16
PEP12YOR036W DGK1Q12382 290 aa1.56□□□□□ -2.16
PEP12YOR036W YCR023CP25351 611 aa1.55□□□□□ -2.16
PEP12YOR036W TFC1P32367 649 aa1.55□□□□□ -2.16
PEP12YOR036W VMA22P38784 181 aa1.55□□□□□ -2.16
PEP12YOR036W GIM4P40005 111 aaKnown RBP1.55□□□□□ -2.16
PEP12YOR036W RFC2P40348 353 aa1.55□□□□□ -2.16
PEP12YOR036W GPI14P47088 403 aaKnown RBP1.55□□□□□ -2.16
PEP12YOR036W MOG1P47123 218 aa1.55□□□□□ -2.16
PEP12YOR036W KNH1P50112 268 aa1.55□□□□□ -2.16
PEP12YOR036W YGL101WP53144 215 aa1.55□□□□□ -2.16
PEP12YOR036W HSK3P69852 69 aa1.55□□□□□ -2.16
PEP12YOR036W TMA20P89886 181 aaPredicted RBP1.55□□□□□ -2.16
PEP12YOR036W VPS71Q03433 280 aa1.55□□□□□ -2.16
Retrieved 100 of 5,963 RNA–protein pairs in 79.8 ms