RNA–Protein interactions for RNA: YOR001W

RRP6, Transcript of Nuclear exosome exonuclease component, yeastyeast

Gene RRP6, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRP6YOR001W GVP36P40531 326 aaKnown RBP1.58□□□□□ -2.16
RRP6YOR001W YFL019CP43576 117 aa1.58□□□□□ -2.16
RRP6YOR001W GPI14P47088 403 aaKnown RBP1.58□□□□□ -2.16
RRP6YOR001W DSK2P48510 373 aa1.58□□□□□ -2.16
RRP6YOR001W YGL101WP53144 215 aa1.58□□□□□ -2.16
RRP6YOR001W DAS2Q12084 232 aa1.58□□□□□ -2.16
RRP6YOR001W YOR342CQ12182 319 aa1.58□□□□□ -2.16
RRP6YOR001W YAR023CD6VPM8 179 aa1.57□□□□□ -2.16
RRP6YOR001W MSW1P04803 379 aa1.57□□□□□ -2.16
RRP6YOR001W RPL26AP05743 127 aaKnown RBP1.57□□□□□ -2.16
RRP6YOR001W CPA1P07258 411 aaKnown RBP1.57□□□□□ -2.16
RRP6YOR001W RSA4P25382 515 aaKnown RBP1.57□□□□□ -2.16
RRP6YOR001W UMP1P38293 148 aa1.57□□□□□ -2.16
RRP6YOR001W YIL059CP40520 121 aa1.57□□□□□ -2.16
RRP6YOR001W MNN5P46982 586 aa1.57□□□□□ -2.16
RRP6YOR001W DOC1P53068 250 aa1.57□□□□□ -2.16
RRP6YOR001W RPL26BP53221 127 aaKnown RBP1.57□□□□□ -2.16
RRP6YOR001W LSM3P57743 89 aaKnown RBP1.57□□□□□ -2.16
RRP6YOR001W SPG3Q04398 127 aaPredicted RBP1.57□□□□□ -2.16
RRP6YOR001W YDR114CQ04597 100 aa1.57□□□□□ -2.16
RRP6YOR001W NEJ1Q06148 342 aa1.57□□□□□ -2.16
RRP6YOR001W IDP1P21954 428 aaKnown RBP1.56□□□□□ -2.16
RRP6YOR001W PAN3P36102 679 aaPredicted RBP1.56□□□□□ -2.16
RRP6YOR001W YHR180WP38868 163 aa1.56□□□□□ -2.16
RRP6YOR001W VTC1P40046 129 aaRIP-Chip data1.56□□□□□ -2.16not detected
RRP6YOR001W APQ12P40532 138 aa1.56□□□□□ -2.16
RRP6YOR001W RBL2P48606 106 aaKnown RBP1.56□□□□□ -2.16
RRP6YOR001W YGR042WP53227 271 aa1.56□□□□□ -2.16
RRP6YOR001W YDR476CQ03362 224 aa1.56□□□□□ -2.16
RRP6YOR001W THI74Q04083 370 aa1.56□□□□□ -2.16
RRP6YOR001W YPR202WQ08993 238 aa1.56□□□□□ -2.16
RRP6YOR001W PBI2P0CT04 75 aaKnown RBP1.56□□□□□ -2.16
RRP6YOR001W SHE2P36068 246 aaKnown RBP RIP-Chip data1.56□□□□□ -2.16not detected
RRP6YOR001W YBR285WP38354 144 aa1.56□□□□□ -2.16
RRP6YOR001W YHL026CP38740 315 aa1.56□□□□□ -2.16
RRP6YOR001W AVT2P39981 480 aa1.56□□□□□ -2.16
RRP6YOR001W PGD1P40356 397 aa1.56□□□□□ -2.16
RRP6YOR001W DLS1P40366 167 aa1.56□□□□□ -2.16
RRP6YOR001W ORM1P53224 222 aa1.56□□□□□ -2.16
RRP6YOR001W IES4Q08561 116 aa1.56□□□□□ -2.16
RRP6YOR001W FSF1Q12029 327 aaKnown RBP1.56□□□□□ -2.16
RRP6YOR001W NOP1P15646 327 aaKnown RBP1.55□□□□□ -2.16
RRP6YOR001W SNC2P33328 115 aa1.55□□□□□ -2.16
RRP6YOR001W CSH1P38287 376 aa1.55□□□□□ -2.16
RRP6YOR001W GIM4P40005 111 aaKnown RBP1.55□□□□□ -2.16
RRP6YOR001W GIS2P53849 153 aaKnown RBP RIP-Chip data1.55□□□□□ -2.16not detected
RRP6YOR001W CSN9Q03981 162 aa1.55□□□□□ -2.16
RRP6YOR001W YML100W-AQ8TGT0 57 aa1.55□□□□□ -2.16
RRP6YOR001W YOR1P53049 1477 aa1.55□□□□□ -2.16
RRP6YOR001W TAF2P23255 1407 aa1.55□□□□□ -2.16
RRP6YOR001W RPL2AP0CX45 254 aaKnown RBP1.55□□□□□ -2.16
RRP6YOR001W RPL2BP0CX46 254 aaKnown RBP1.55□□□□□ -2.16
RRP6YOR001W KRE1P17260 313 aa1.55□□□□□ -2.16
RRP6YOR001W STP22P25604 385 aa1.55□□□□□ -2.16
RRP6YOR001W YAP3P38749 330 aa1.55□□□□□ -2.16
RRP6YOR001W CYC2P38909 366 aa1.55□□□□□ -2.16
RRP6YOR001W SPO73P40031 143 aa1.55□□□□□ -2.16
RRP6YOR001W YJR146WP47174 117 aa1.55□□□□□ -2.16
RRP6YOR001W YDR274CP87283 123 aa1.55□□□□□ -2.16
RRP6YOR001W RAV2Q03956 351 aa1.55□□□□□ -2.16
RRP6YOR001W YOL014WQ08110 124 aa1.55□□□□□ -2.16
RRP6YOR001W YDL012CQ12489 107 aa1.55□□□□□ -2.16
RRP6YOR001W RPL30P14120 105 aaKnown RBP1.54□□□□□ -2.16
RRP6YOR001W PHO85P17157 305 aa1.54□□□□□ -2.16
RRP6YOR001W FYV4P38783 130 aaPredicted RBP1.54□□□□□ -2.16
RRP6YOR001W YGL204CP53089 101 aa1.54□□□□□ -2.16
RRP6YOR001W MPC3P53311 146 aa1.54□□□□□ -2.16
RRP6YOR001W VPS71Q03433 280 aa1.54□□□□□ -2.16
RRP6YOR001W YMR320WQ04897 101 aa1.54□□□□□ -2.16
RRP6YOR001W PEX34P25584 144 aa1.54□□□□□ -2.16
RRP6YOR001W SFK1P35735 353 aa1.54□□□□□ -2.16
RRP6YOR001W YGR201CP42936 225 aa1.54□□□□□ -2.16
RRP6YOR001W ATO3Q12359 275 aa1.54□□□□□ -2.16
RRP6YOR001W POR1P04840 283 aaKnown RBP1.53□□□□□ -2.16
RRP6YOR001W TIR1P10863 254 aa1.53□□□□□ -2.16
RRP6YOR001W SDH4P37298 181 aa1.53□□□□□ -2.16
RRP6YOR001W FCY21P40039 528 aa1.53□□□□□ -2.16
RRP6YOR001W YNR062CP53748 327 aa1.53□□□□□ -2.16
RRP6YOR001W HHT1P61830 136 aa1.53□□□□□ -2.16
RRP6YOR001W HRD1Q08109 551 aa1.53□□□□□ -2.16
RRP6YOR001W YOR214CQ12282 236 aa1.53□□□□□ -2.16
RRP6YOR001W RAS2P01120 322 aaKnown RBP1.52□□□□□ -2.17
RRP6YOR001W ATP5P09457 212 aa1.52□□□□□ -2.17
RRP6YOR001W MIG1P27705 504 aa1.52□□□□□ -2.17
RRP6YOR001W RPC19P28000 142 aaKnown RBP1.52□□□□□ -2.17
RRP6YOR001W YET1P35723 206 aa1.52□□□□□ -2.17
RRP6YOR001W NSA2P40078 261 aaKnown RBP1.52□□□□□ -2.17
RRP6YOR001W RPL33BP41056 107 aaKnown RBP1.52□□□□□ -2.17
RRP6YOR001W GLR1P41921 483 aaKnown RBP1.52□□□□□ -2.17
RRP6YOR001W ERJ5P43613 295 aaPredicted RBP1.52□□□□□ -2.17
RRP6YOR001W CCC1P47818 322 aa1.52□□□□□ -2.17
RRP6YOR001W BOL2P53082 120 aa1.52□□□□□ -2.17
RRP6YOR001W DAD3P69850 94 aa1.52□□□□□ -2.17
RRP6YOR001W MRPS8Q03799 155 aa1.52□□□□□ -2.17
RRP6YOR001W YPD1Q07688 167 aa1.52□□□□□ -2.17
RRP6YOR001W VPS68Q12016 184 aa1.52□□□□□ -2.17
RRP6YOR001W ATP20Q12233 115 aa1.52□□□□□ -2.17
RRP6YOR001W SCL1P21243 252 aaKnown RBP1.52□□□□□ -2.17
RRP6YOR001W CPR5P35176 225 aa1.52□□□□□ -2.17
RRP6YOR001W SVP26P38869 228 aa1.52□□□□□ -2.17
Retrieved 100 of 5,963 RNA–protein pairs in 13.6 ms