RNA–Protein interactions for RNA: YML107C

PML39, Transcript of Protein required for nuclear retention of unspliced pre-mRNAs, yeastyeast

Gene PML39, Length 1,005 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PML39YML107C PET191Q02772 108 aa2.22□□□□□ -2.05
PML39YML107C ARO80Q04052 950 aa2.22□□□□□ -2.05
PML39YML107C GRX8Q05926 109 aa2.22□□□□□ -2.05
PML39YML107C YOR186WQ08560 144 aa2.22□□□□□ -2.05
PML39YML107C NSL1Q12143 216 aa2.22□□□□□ -2.05
PML39YML107C YHR086W-AQ3E746 53 aa2.22□□□□□ -2.05
PML39YML107C RPO41P13433 1351 aaKnown RBP2.22□□□□□ -2.05
PML39YML107C YHR032W-AP0C5N6 59 aa2.21□□□□□ -2.06
PML39YML107C SEN2P16658 377 aa2.21□□□□□ -2.06
PML39YML107C GRX2P17695 143 aaKnown RBP2.21□□□□□ -2.06
PML39YML107C ERG24P32462 438 aaKnown RBP2.21□□□□□ -2.06
PML39YML107C YHR125WP38831 101 aa2.21□□□□□ -2.06
PML39YML107C YHR127WP38833 243 aaKnown RBP2.21□□□□□ -2.06
PML39YML107C EDC3P39998 551 aaKnown RBP2.21□□□□□ -2.06
PML39YML107C YER076CP40049 302 aa2.21□□□□□ -2.06
PML39YML107C RSM25P40496 264 aa2.21□□□□□ -2.06
PML39YML107C PRM10P42946 383 aa2.21□□□□□ -2.06
PML39YML107C YGR026WP53217 278 aa2.21□□□□□ -2.06
PML39YML107C NQM1P53228 333 aaPredicted RBP2.21□□□□□ -2.06
PML39YML107C YDR248CQ03786 193 aa2.21□□□□□ -2.06
PML39YML107C YMR315WQ04869 349 aaKnown RBP2.21□□□□□ -2.06
PML39YML107C RIO1Q12196 484 aaKnown RBP2.21□□□□□ -2.06
PML39YML107C IPP1P00817 287 aaKnown RBP2.2□□□□□ -2.06
PML39YML107C Q0255P03881 472 aa2.2□□□□□ -2.06
PML39YML107C ADH3P07246 375 aaKnown RBP2.2□□□□□ -2.06
PML39YML107C TRR1P29509 319 aaKnown RBP2.2□□□□□ -2.06
PML39YML107C MDH3P32419 343 aaKnown RBP RIP-Chip data2.2□□□□□ -2.06not detected
PML39YML107C VMA11P32842 164 aa2.2□□□□□ -2.06
PML39YML107C SHG1P38337 142 aa2.2□□□□□ -2.06
PML39YML107C SOK1P40317 901 aa2.2□□□□□ -2.06
PML39YML107C IRC18P47056 224 aa2.2□□□□□ -2.06
PML39YML107C YJL027CP47063 138 aaPredicted RBP2.2□□□□□ -2.06
PML39YML107C BRR6P53062 197 aa2.2□□□□□ -2.06
PML39YML107C MMS2P53152 137 aa2.2□□□□□ -2.06
PML39YML107C PDR17P53844 350 aa2.2□□□□□ -2.06
PML39YML107C NOC4Q06512 552 aaPredicted RBP2.2□□□□□ -2.06
PML39YML107C YLR030WQ07967 263 aa2.2□□□□□ -2.06
PML39YML107C FLO1P32768 1537 aa2.19□□□□□ -2.06
PML39YML107C CDC28P00546 298 aaKnown RBP2.19□□□□□ -2.06
PML39YML107C OAC1P32332 324 aa2.19□□□□□ -2.06
PML39YML107C MRPL28P36527 147 aa2.19□□□□□ -2.06
PML39YML107C CYC2P38909 366 aa2.19□□□□□ -2.06
PML39YML107C FMP32P43557 207 aa2.19□□□□□ -2.06
PML39YML107C NSA1P53136 463 aaPredicted RBP2.19□□□□□ -2.06
PML39YML107C GTR2P53290 341 aa2.19□□□□□ -2.06
PML39YML107C YNL046WP53956 172 aa2.19□□□□□ -2.06
PML39YML107C YMR279CQ03263 540 aa2.19□□□□□ -2.06
PML39YML107C SEI1Q06058 285 aa2.19□□□□□ -2.06
PML39YML107C YET3Q07451 203 aa2.19□□□□□ -2.06
PML39YML107C MSA1Q08471 629 aa2.19□□□□□ -2.06
PML39YML107C YPL257WQ08974 193 aa2.19□□□□□ -2.06
PML39YML107C PMD1P32634 1753 aa2.18□□□□□ -2.06
PML39YML107C YCR023CP25351 611 aa2.18□□□□□ -2.06
PML39YML107C TAH1P25638 111 aaPredicted RBP2.18□□□□□ -2.06
PML39YML107C ARO7P32178 256 aa2.18□□□□□ -2.06
PML39YML107C SRP102P36057 244 aaPredicted RBP2.18□□□□□ -2.06
PML39YML107C ECM33P38248 429 aaKnown RBP2.18□□□□□ -2.06
PML39YML107C YMR144WP40214 342 aaKnown RBP2.18□□□□□ -2.06
PML39YML107C FIS1P40515 155 aa2.18□□□□□ -2.06
PML39YML107C YJR111CP47148 283 aaKnown RBP2.18□□□□□ -2.06
PML39YML107C MCM22P47167 239 aa2.18□□□□□ -2.06
PML39YML107C SBH2P52871 88 aa2.18□□□□□ -2.06
PML39YML107C RCF2P53721 224 aa2.18□□□□□ -2.06
PML39YML107C FYV6P53913 173 aa2.18□□□□□ -2.06
PML39YML107C NUP49Q02199 472 aa2.18□□□□□ -2.06
PML39YML107C SPC24Q04477 213 aa2.18□□□□□ -2.06
PML39YML107C INM2Q05533 292 aa2.18□□□□□ -2.06
PML39YML107C YLR053CQ12026 108 aa2.18□□□□□ -2.06
PML39YML107C MRS1P07266 363 aa2.17□□□□□ -2.06
PML39YML107C RPS28BP0C0X0 67 aaKnown RBP2.17□□□□□ -2.06
PML39YML107C ERD2P18414 219 aa2.17□□□□□ -2.06
PML39YML107C YCR090CP25654 182 aaKnown RBP2.17□□□□□ -2.06
PML39YML107C GIM4P40005 111 aaKnown RBP2.17□□□□□ -2.06
PML39YML107C YFH7P43591 353 aa2.17□□□□□ -2.06
PML39YML107C MOG1P47123 218 aa2.17□□□□□ -2.06
PML39YML107C UBC12P52491 188 aa2.17□□□□□ -2.06
PML39YML107C COG5P53951 403 aa2.17□□□□□ -2.06
PML39YML107C HSK3P69852 69 aa2.17□□□□□ -2.06
PML39YML107C YPR127WQ06494 345 aa2.17□□□□□ -2.06
PML39YML107C HEM25Q07534 307 aa2.17□□□□□ -2.06
PML39YML107C AKR2Q12013 749 aa2.17□□□□□ -2.06
PML39YML107C ATO3Q12359 275 aa2.17□□□□□ -2.06
PML39YML107C RPS28AQ3E7X9 67 aaPredicted RBP2.17□□□□□ -2.06
PML39YML107C HTL1Q9URQ5 78 aa2.17□□□□□ -2.06
PML39YML107C UTP10P42945 1769 aaKnown RBP2.17□□□□□ -2.06
PML39YML107C LYS2P07702 1392 aa2.16□□□□□ -2.06
PML39YML107C PET54P10834 293 aa2.16□□□□□ -2.06
PML39YML107C CAF4P36130 643 aa2.16□□□□□ -2.06
PML39YML107C ILM1P47155 203 aa2.16□□□□□ -2.06
PML39YML107C YGR042WP53227 271 aa2.16□□□□□ -2.06
PML39YML107C MPA43P53583 542 aaPredicted RBP2.16□□□□□ -2.06
PML39YML107C ABF2Q02486 183 aa2.16□□□□□ -2.06
PML39YML107C RFU1Q08003 200 aa2.16□□□□□ -2.06
PML39YML107C YLR050CQ12155 161 aaKnown RBP2.16□□□□□ -2.06
PML39YML107C RDI1Q12434 202 aa2.16□□□□□ -2.06
PML39YML107C COX5AP00424 153 aa2.15□□□□□ -2.07
PML39YML107C SEC4P07560 215 aaKnown RBP2.15□□□□□ -2.07
PML39YML107C GCN3P14741 305 aa2.15□□□□□ -2.07
PML39YML107C UPS2P35200 230 aa2.15□□□□□ -2.07
PML39YML107C SLM6P38343 150 aa2.15□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 55.4 ms