RNA–Protein interactions for RNA: YLR336C

SGD1, Transcript of Essential nuclear protein, yeastyeast

Gene SGD1, Length 2,700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SGD1YLR336C SEC11P15367 167 aa1□□□□□ -2.25
SGD1YLR336C PAN3P36102 679 aaPredicted RBP1□□□□□ -2.25
SGD1YLR336C YOL014WQ08110 124 aa1□□□□□ -2.25
SGD1YLR336C RIO1Q12196 484 aaKnown RBP1□□□□□ -2.25
SGD1YLR336C QCR8P08525 94 aa1□□□□□ -2.25
SGD1YLR336C FPR1P20081 114 aaKnown RBP1□□□□□ -2.25
SGD1YLR336C YCR090CP25654 182 aaKnown RBP1□□□□□ -2.25
SGD1YLR336C YMR099CQ03161 297 aaKnown RBP1□□□□□ -2.25
SGD1YLR336C FUS2Q05670 677 aa1□□□□□ -2.25
SGD1YLR336C FMP23P38231 175 aa0.99□□□□□ -2.25
SGD1YLR336C CUE4Q04201 117 aaPredicted RBP0.99□□□□□ -2.25
SGD1YLR336C NOC4Q06512 552 aaPredicted RBP0.99□□□□□ -2.25
SGD1YLR336C YOL024WQ08172 172 aa0.99□□□□□ -2.25
SGD1YLR336C GRE1Q08969 168 aa0.99□□□□□ -2.25
SGD1YLR336C GPA2P10823 449 aa0.99□□□□□ -2.25
SGD1YLR336C TVP23P38962 199 aa0.99□□□□□ -2.25
SGD1YLR336C PDS1P40316 373 aaPredicted RBP0.99□□□□□ -2.25
SGD1YLR336C YML100W-AQ8TGT0 57 aa0.99□□□□□ -2.25
SGD1YLR336C YAR023CD6VPM8 179 aa0.98□□□□□ -2.25
SGD1YLR336C YER034WP40022 185 aaKnown RBP0.98□□□□□ -2.25
SGD1YLR336C NAT3Q06504 195 aa0.98□□□□□ -2.25
SGD1YLR336C PDR15Q04182 1529 aaKnown RBP0.98□□□□□ -2.25
SGD1YLR336C BNI1P41832 1953 aa0.98□□□□□ -2.25
SGD1YLR336C REV3P14284 1504 aa0.98□□□□□ -2.25
SGD1YLR336C TAH1P25638 111 aaPredicted RBP0.98□□□□□ -2.25
SGD1YLR336C YPL073CP40323 161 aa0.98□□□□□ -2.25
SGD1YLR336C AIM2P39721 246 aa0.97□□□□□ -2.25
SGD1YLR336C RTC4P53850 401 aa0.97□□□□□ -2.25
SGD1YLR336C GIM3P53900 129 aa0.97□□□□□ -2.25
SGD1YLR336C SNO1Q03144 224 aa0.97□□□□□ -2.25
SGD1YLR336C GRX8Q05926 109 aa0.97□□□□□ -2.25
SGD1YLR336C YLR031WQ07978 186 aa0.97□□□□□ -2.25
SGD1YLR336C SNF4P12904 322 aa0.97□□□□□ -2.25
SGD1YLR336C TRX3P25372 127 aa0.97□□□□□ -2.25
SGD1YLR336C YKR041WP36134 250 aa0.97□□□□□ -2.25
SGD1YLR336C YER134CP40081 178 aa0.97□□□□□ -2.25
SGD1YLR336C MPA43P53583 542 aaPredicted RBP0.97□□□□□ -2.25
SGD1YLR336C NRK1P53915 240 aa0.97□□□□□ -2.25
SGD1YLR336C DYN3Q04949 312 aa0.97□□□□□ -2.25
SGD1YLR336C RNH202Q05635 350 aa0.97□□□□□ -2.25
SGD1YLR336C IRC23Q08416 157 aa0.97□□□□□ -2.25
SGD1YLR336C YDL180WQ12301 547 aa0.97□□□□□ -2.25
SGD1YLR336C TDA4P47153 279 aa0.96□□□□□ -2.26
SGD1YLR336C ACC1Q00955 2233 aaKnown RBP0.96□□□□□ -2.26
SGD1YLR336C TIR1P10863 254 aa0.96□□□□□ -2.26
SGD1YLR336C CAF4P36130 643 aa0.96□□□□□ -2.26
SGD1YLR336C YFL019CP43576 117 aa0.96□□□□□ -2.26
SGD1YLR336C YMR315WQ04869 349 aaKnown RBP0.96□□□□□ -2.26
SGD1YLR336C BRX1Q08235 291 aaKnown RBP0.96□□□□□ -2.26
SGD1YLR336C MSB2P32334 1306 aa0.96□□□□□ -2.26
SGD1YLR336C HSL1P34244 1518 aa0.96□□□□□ -2.26
SGD1YLR336C LTE1P07866 1435 aa0.95□□□□□ -2.26
SGD1YLR336C MGT1P26188 188 aa0.95□□□□□ -2.26
SGD1YLR336C ATP7P30902 174 aa0.95□□□□□ -2.26
SGD1YLR336C MTW1P39731 289 aa0.95□□□□□ -2.26
SGD1YLR336C HOP2P53187 214 aa0.95□□□□□ -2.26
SGD1YLR336C MZM1Q03429 123 aaPredicted RBP0.95□□□□□ -2.26
SGD1YLR336C PHO85P17157 305 aa0.95□□□□□ -2.26
SGD1YLR336C PAM17P36147 197 aa0.95□□□□□ -2.26
SGD1YLR336C TVP38P36164 337 aa0.95□□□□□ -2.26
SGD1YLR336C YER076CP40049 302 aa0.95□□□□□ -2.26
SGD1YLR336C YPR174CQ06616 221 aaPredicted RBP0.95□□□□□ -2.26
SGD1YLR336C YLR036CQ07986 203 aa0.95□□□□□ -2.26
SGD1YLR336C YHL018WP38744 120 aaPredicted RBP0.95□□□□□ -2.26
SGD1YLR336C PGA1P53896 198 aa0.95□□□□□ -2.26
SGD1YLR336C YMR295CQ03559 197 aa0.95□□□□□ -2.26
SGD1YLR336C AIM34Q03673 198 aa0.95□□□□□ -2.26
SGD1YLR336C ATG38Q05789 226 aaKnown RBP0.95□□□□□ -2.26
SGD1YLR336C FYV12Q08559 129 aa0.95□□□□□ -2.26
SGD1YLR336C YNL146C-AQ3E7Z1 64 aa0.95□□□□□ -2.26
SGD1YLR336C GCY1P14065 312 aaKnown RBP RIP-Chip data0.94□□□□□ -2.26not detected
SGD1YLR336C SHG1P38337 142 aa0.94□□□□□ -2.26
SGD1YLR336C GPI14P47088 403 aaKnown RBP0.94□□□□□ -2.26
SGD1YLR336C UBC7Q02159 165 aa0.94□□□□□ -2.26
SGD1YLR336C SHH3Q04487 196 aa0.94□□□□□ -2.26
SGD1YLR336C YHR007C-AQ07074 71 aa0.94□□□□□ -2.26
SGD1YLR336C YDL085C-AQ3E7B7 68 aaKnown RBP0.94□□□□□ -2.26
SGD1YLR336C MDM35O60200 86 aa0.94□□□□□ -2.26
SGD1YLR336C FLX1P40464 311 aa0.94□□□□□ -2.26
SGD1YLR336C YNL033WP53964 284 aa0.94□□□□□ -2.26
SGD1YLR336C DIG2Q03373 323 aaKnown RBP0.94□□□□□ -2.26
SGD1YLR336C YMR253CQ04835 414 aa0.94□□□□□ -2.26
SGD1YLR336C FIT2Q08906 153 aa0.94□□□□□ -2.26
SGD1YLR336C YPR013CQ12145 317 aa0.94□□□□□ -2.26
SGD1YLR336C YBR056W-AI2HB52 66 aa0.93□□□□□ -2.26
SGD1YLR336C RPS24AP0CX31 135 aaKnown RBP0.93□□□□□ -2.26
SGD1YLR336C RPS24BP0CX32 135 aaKnown RBP0.93□□□□□ -2.26
SGD1YLR336C NSP1P14907 823 aaKnown RBP0.93□□□□□ -2.26
SGD1YLR336C IDP1P21954 428 aaKnown RBP0.93□□□□□ -2.26
SGD1YLR336C AHC2P25649 128 aa0.93□□□□□ -2.26
SGD1YLR336C POG1P40473 351 aa0.93□□□□□ -2.26
SGD1YLR336C YNL247WP53852 767 aaKnown RBP0.93□□□□□ -2.26
SGD1YLR336C DAD4P69851 72 aa0.93□□□□□ -2.26
SGD1YLR336C VPS71Q03433 280 aa0.93□□□□□ -2.26
SGD1YLR336C CHD1P32657 1468 aa0.93□□□□□ -2.26
SGD1YLR336C COX8P04039 78 aa0.93□□□□□ -2.26
SGD1YLR336C AQY2P0CD90 149 aa0.93□□□□□ -2.26
SGD1YLR336C CLG1P35190 452 aa0.93□□□□□ -2.26
SGD1YLR336C SPC25P40014 221 aa0.93□□□□□ -2.26
SGD1YLR336C RIO2P40160 425 aaKnown RBP0.93□□□□□ -2.26
Retrieved 100 of 5,963 RNA–protein pairs in 54.9 ms