RNA–Protein interactions for RNA: YLR260W

LCB5, Transcript of Minor sphingoid long-chain base kinase, yeastyeast

Gene LCB5, Length 2,064 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCB5YLR260W YFR054CP43622 192 aa3□□□□□ -1.93
LCB5YLR260W GPI14P47088 403 aaKnown RBP3□□□□□ -1.93
LCB5YLR260W SAE3P89114 91 aa3□□□□□ -1.93
LCB5YLR260W PET191Q02772 108 aa3□□□□□ -1.93
LCB5YLR260W YLR446WQ06204 433 aa3□□□□□ -1.93
LCB5YLR260W TIM18Q08749 192 aa3□□□□□ -1.93
LCB5YLR260W YPR202WQ08993 238 aa3□□□□□ -1.93
LCB5YLR260W TRM10Q12400 293 aa3□□□□□ -1.93
LCB5YLR260W YDL199CQ12407 687 aa3□□□□□ -1.93
LCB5YLR260W PSF1Q12488 208 aa3□□□□□ -1.93
LCB5YLR260W SLO1Q3E784 85 aa3□□□□□ -1.93
LCB5YLR260W TAD3Q9URQ3 322 aa3□□□□□ -1.93
LCB5YLR260W FLO9P39712 1322 aa3□□□□□ -1.93
LCB5YLR260W YAL064W-BO13512 126 aa3□□□□□ -1.93
LCB5YLR260W PHO2P07269 559 aa3□□□□□ -1.93
LCB5YLR260W MDM10P18409 493 aa3□□□□□ -1.93
LCB5YLR260W HYM1P32464 399 aa3□□□□□ -1.93
LCB5YLR260W AST2P39945 430 aaKnown RBP3□□□□□ -1.93
LCB5YLR260W MAM33P40513 266 aa3□□□□□ -1.93
LCB5YLR260W YIL067CP40514 678 aa3□□□□□ -1.93
LCB5YLR260W LSM8P47093 109 aaKnown RBP3□□□□□ -1.93
LCB5YLR260W UBC12P52491 188 aa3□□□□□ -1.93
LCB5YLR260W PRM8P53174 237 aa3□□□□□ -1.93
LCB5YLR260W ATP23P53722 227 aa3□□□□□ -1.93
LCB5YLR260W YNL184CP53876 108 aa3□□□□□ -1.93
LCB5YLR260W CTL1Q03220 320 aaKnown RBP3□□□□□ -1.93
LCB5YLR260W SPG4Q04438 115 aa3□□□□□ -1.93
LCB5YLR260W YMR317WQ04893 1140 aa3□□□□□ -1.93
LCB5YLR260W FMP42Q04991 504 aa3□□□□□ -1.93
LCB5YLR260W OSW1Q08692 278 aa3□□□□□ -1.93
LCB5YLR260W RRG7Q08774 242 aaPredicted RBP3□□□□□ -1.93
LCB5YLR260W FRE8Q12209 686 aa3□□□□□ -1.93
LCB5YLR260W PST2Q12335 198 aaKnown RBP3□□□□□ -1.93
LCB5YLR260W YPL229WQ99395 206 aa3□□□□□ -1.93
LCB5YLR260W DDI2P0CH63 225 aa2.99□□□□□ -1.93
LCB5YLR260W DDI3P0CH64 225 aa2.99□□□□□ -1.93
LCB5YLR260W RNA14P25298 677 aaKnown RBP2.99□□□□□ -1.93
LCB5YLR260W ALK2P32789 676 aaPredicted RBP2.99□□□□□ -1.93
LCB5YLR260W KTI12P34253 313 aaKnown RBP2.99□□□□□ -1.93
LCB5YLR260W SFK1P35735 353 aa2.99□□□□□ -1.93
LCB5YLR260W GLC8P41818 229 aa2.99□□□□□ -1.93
LCB5YLR260W AIM25P47140 327 aa2.99□□□□□ -1.93
LCB5YLR260W PGU1P47180 361 aa2.99□□□□□ -1.93
LCB5YLR260W SOL1P50278 321 aa2.99□□□□□ -1.93
LCB5YLR260W RSM27P53305 110 aa2.99□□□□□ -1.93
LCB5YLR260W ODC1Q03028 310 aa2.99□□□□□ -1.93
LCB5YLR260W GMC1Q04399 608 aa2.99□□□□□ -1.93
LCB5YLR260W FDH1Q08911 376 aa2.99□□□□□ -1.93
LCB5YLR260W TFC7Q12415 435 aa2.99□□□□□ -1.93
LCB5YLR260W PRM4Q12498 284 aa2.99□□□□□ -1.93
LCB5YLR260W SCO1P23833 295 aa2.99□□□□□ -1.93
LCB5YLR260W ATS1P31386 333 aa2.99□□□□□ -1.93
LCB5YLR260W PGD1P40356 397 aa2.99□□□□□ -1.93
LCB5YLR260W HST4P53688 370 aa2.99□□□□□ -1.93
LCB5YLR260W NCE101Q02820 53 aa2.99□□□□□ -1.93
LCB5YLR260W RSC9Q03124 581 aa2.99□□□□□ -1.93
LCB5YLR260W MIX14Q04341 121 aa2.99□□□□□ -1.93
LCB5YLR260W ZEO1Q08245 113 aa2.99□□□□□ -1.93
LCB5YLR260W SCP1Q08873 200 aa2.99□□□□□ -1.93
LCB5YLR260W AQY1P0CD91 305 aa2.98□□□□□ -1.93
LCB5YLR260W AVT5P38176 459 aa2.98□□□□□ -1.93
LCB5YLR260W YBR285WP38354 144 aa2.98□□□□□ -1.93
LCB5YLR260W RCK1P38622 512 aa2.98□□□□□ -1.93
LCB5YLR260W ECM34P38728 170 aa2.98□□□□□ -1.93
LCB5YLR260W DOG2P38773 246 aa2.98□□□□□ -1.93
LCB5YLR260W DOG1P38774 246 aa2.98□□□□□ -1.93
LCB5YLR260W GVP36P40531 326 aaKnown RBP2.98□□□□□ -1.93
LCB5YLR260W YJR015WP47090 510 aa2.98□□□□□ -1.93
LCB5YLR260W IGO1P53897 168 aa2.98□□□□□ -1.93
LCB5YLR260W MRX11Q03079 207 aa2.98□□□□□ -1.93
LCB5YLR260W TSA2Q04120 196 aa2.98□□□□□ -1.93
LCB5YLR260W YDL085C-AQ3E7B7 68 aaKnown RBP2.98□□□□□ -1.93
LCB5YLR260W YCR024C-BQ3E7Z8 88 aa2.98□□□□□ -1.93
LCB5YLR260W YOR032W-AQ8TGS1 66 aa2.98□□□□□ -1.93
LCB5YLR260W RPL16AP26784 199 aaKnown RBP2.97□□□□□ -1.93
LCB5YLR260W SKG1P36169 355 aa2.97□□□□□ -1.93
LCB5YLR260W MTC6P38849 526 aa2.97□□□□□ -1.93
LCB5YLR260W PEX22P39718 180 aa2.97□□□□□ -1.93
LCB5YLR260W RPS12P48589 143 aaKnown RBP2.97□□□□□ -1.93
LCB5YLR260W RAV2Q03956 351 aa2.97□□□□□ -1.93
LCB5YLR260W YMR320WQ04897 101 aa2.97□□□□□ -1.93
LCB5YLR260W HRD1Q08109 551 aa2.97□□□□□ -1.93
LCB5YLR260W YPL257WQ08974 193 aa2.97□□□□□ -1.93
LCB5YLR260W YOR214CQ12282 236 aa2.97□□□□□ -1.93
LCB5YLR260W ATG15P25641 520 aa2.97□□□□□ -1.93
LCB5YLR260W NSG1P38837 291 aa2.97□□□□□ -1.93
LCB5YLR260W PTH1P38876 190 aaKnown RBP2.97□□□□□ -1.93
LCB5YLR260W XBP1P40489 647 aa2.97□□□□□ -1.93
LCB5YLR260W HAC1P41546 238 aa2.97□□□□□ -1.93
LCB5YLR260W GWT1P47026 490 aa2.97□□□□□ -1.93
LCB5YLR260W AVT4P50944 713 aa2.97□□□□□ -1.93
LCB5YLR260W YGR017WP53210 297 aa2.97□□□□□ -1.93
LCB5YLR260W BOR1P53838 576 aa2.97□□□□□ -1.93
LCB5YLR260W YOL160WQ08321 113 aa2.97□□□□□ -1.93
LCB5YLR260W YFR010W-AP0C5N0 62 aa2.96□□□□□ -1.94
LCB5YLR260W UBI4P0CG63 381 aaKnown RBP2.96□□□□□ -1.94
LCB5YLR260W CDC50P25656 391 aa2.96□□□□□ -1.94
LCB5YLR260W AGA1P32323 725 aa2.96□□□□□ -1.94
LCB5YLR260W ERG24P32462 438 aaKnown RBP2.96□□□□□ -1.94
LCB5YLR260W YOR062CP36025 268 aa2.96□□□□□ -1.94
Retrieved 100 of 5,963 RNA–protein pairs in 11.3 ms