RNA–Protein interactions for RNA: YLL040C

VPS13, Transcript of Protein involved in prospore membrane morphogenesis, yeastyeast

Gene VPS13, Length 9,435 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS13YLL040C YMR090WQ04304 227 aaKnown RBP2.03□□□□□ -2.08
VPS13YLL040C YDL129WQ07555 291 aa2.03□□□□□ -2.08
VPS13YLL040C FRE7Q12333 620 aa2.03□□□□□ -2.08
VPS13YLL040C SUA7P29055 345 aaPredicted RBP2.03□□□□□ -2.08
VPS13YLL040C PGU1P47180 361 aa2.03□□□□□ -2.08
VPS13YLL040C OST3P48439 350 aa2.03□□□□□ -2.08
VPS13YLL040C HST4P53688 370 aa2.03□□□□□ -2.08
VPS13YLL040C YML096WQ04489 525 aa2.03□□□□□ -2.08
VPS13YLL040C MDM10P18409 493 aa2.03□□□□□ -2.08
VPS13YLL040C TOM40P23644 387 aaKnown RBP2.03□□□□□ -2.08
VPS13YLL040C RNP1P32385 249 aa2.03□□□□□ -2.08
VPS13YLL040C NNK1P36003 928 aa2.03□□□□□ -2.08
VPS13YLL040C YIL169CP40442 995 aa2.03□□□□□ -2.08
VPS13YLL040C ERV2Q12284 196 aa2.03□□□□□ -2.08
VPS13YLL040C COA2Q3E823 68 aa2.03□□□□□ -2.08
VPS13YLL040C RPL7AP05737 244 aaKnown RBP2.03□□□□□ -2.08
VPS13YLL040C YPR170W-BP0C5R9 85 aa2.03□□□□□ -2.08
VPS13YLL040C TPP1Q03796 238 aa2.03□□□□□ -2.08
VPS13YLL040C YDR415CQ04033 374 aaPredicted RBP2.03□□□□□ -2.08
VPS13YLL040C THI72Q08579 599 aa2.03□□□□□ -2.08
VPS13YLL040C RPL7BQ12213 244 aaKnown RBP2.03□□□□□ -2.08
VPS13YLL040C MRPL39P36533 70 aa2.03□□□□□ -2.09
VPS13YLL040C LOA1Q06508 300 aa2.03□□□□□ -2.09
VPS13YLL040C SOR1P35497 357 aaKnown RBP2.03□□□□□ -2.09
VPS13YLL040C YHR210CP38893 341 aa2.03□□□□□ -2.09
VPS13YLL040C GMC1Q04399 608 aa2.03□□□□□ -2.09
VPS13YLL040C SOR2Q07786 357 aa2.03□□□□□ -2.09
VPS13YLL040C YOL024WQ08172 172 aa2.03□□□□□ -2.09
VPS13YLL040C CSM4Q08955 156 aa2.03□□□□□ -2.09
VPS13YLL040C ERG8P24521 451 aa2.02□□□□□ -2.09
VPS13YLL040C FHN1P53279 174 aa2.02□□□□□ -2.09
VPS13YLL040C CPD1P53314 239 aa2.02□□□□□ -2.09
VPS13YLL040C SAE3P89114 91 aa2.02□□□□□ -2.09
VPS13YLL040C API2Q04413 109 aa2.02□□□□□ -2.09
VPS13YLL040C WSC3Q12215 556 aa2.02□□□□□ -2.09
VPS13YLL040C ODC2Q99297 307 aa2.02□□□□□ -2.09
VPS13YLL040C SNF5P18480 905 aa2.02□□□□□ -2.09
VPS13YLL040C BRP1P53194 125 aa2.02□□□□□ -2.09
VPS13YLL040C ROX3P25046 220 aa2.02□□□□□ -2.09
VPS13YLL040C QRI5P32344 111 aa2.02□□□□□ -2.09
VPS13YLL040C GET2P40056 285 aa2.02□□□□□ -2.09
VPS13YLL040C ARR3Q06598 404 aa2.02□□□□□ -2.09
VPS13YLL040C MHR1Q06630 226 aa2.02□□□□□ -2.09
VPS13YLL040C CCW14O13547 238 aa2.02□□□□□ -2.09
VPS13YLL040C YHR173CP38864 112 aa2.02□□□□□ -2.09
VPS13YLL040C YJL016WP47072 561 aa2.02□□□□□ -2.09
VPS13YLL040C YIP3P53633 176 aa2.02□□□□□ -2.09
VPS13YLL040C YIL046W-AQ3E7Z4 54 aa2.02□□□□□ -2.09
VPS13YLL040C MIX23P38162 196 aa2.02□□□□□ -2.09
VPS13YLL040C TEM1P38987 245 aa2.02□□□□□ -2.09
VPS13YLL040C YJL193WP39542 402 aa2.02□□□□□ -2.09
VPS13YLL040C SEC24P40482 926 aaKnown RBP2.02□□□□□ -2.09
VPS13YLL040C YGL230CP53074 147 aa2.02□□□□□ -2.09
VPS13YLL040C YNR014WP53719 212 aa2.02□□□□□ -2.09
VPS13YLL040C SUR7P54003 302 aa2.02□□□□□ -2.09
VPS13YLL040C ARC18Q05933 178 aaKnown RBP2.02□□□□□ -2.09
VPS13YLL040C UBP8P50102 471 aa2.02□□□□□ -2.09
VPS13YLL040C NRG1Q03125 231 aa2.02□□□□□ -2.09
VPS13YLL040C STP3Q05937 343 aa2.02□□□□□ -2.09
VPS13YLL040C YLR342W-AQ3E810 57 aa2.02□□□□□ -2.09
VPS13YLL040C YHR214C-DP0CX93 97 aa2.02□□□□□ -2.09
VPS13YLL040C HEM13P11353 328 aaKnown RBP2.02□□□□□ -2.09
VPS13YLL040C NOP1P15646 327 aaKnown RBP2.02□□□□□ -2.09
VPS13YLL040C RPB8P20436 146 aa2.02□□□□□ -2.09
VPS13YLL040C AVT4P50944 713 aa2.02□□□□□ -2.09
VPS13YLL040C LST7P53237 242 aa2.02□□□□□ -2.09
VPS13YLL040C YOR105WQ08504 108 aa2.02□□□□□ -2.09
VPS13YLL040C UBR1P19812 1950 aa2.02□□□□□ -2.09
VPS13YLL040C CPR1P14832 162 aaKnown RBP2.01□□□□□ -2.09
VPS13YLL040C MRP51Q02950 344 aa2.01□□□□□ -2.09
VPS13YLL040C HUT1Q12520 339 aa2.01□□□□□ -2.09
VPS13YLL040C RPS27AP35997 82 aaKnown RBP2.01□□□□□ -2.09
VPS13YLL040C RPS27BP38711 82 aa2.01□□□□□ -2.09
VPS13YLL040C SRP14P38985 146 aa2.01□□□□□ -2.09
VPS13YLL040C YJR111CP47148 283 aaKnown RBP2.01□□□□□ -2.09
VPS13YLL040C PDR16P53860 351 aaKnown RBP2.01□□□□□ -2.09
VPS13YLL040C DPB4Q04603 196 aaKnown RBP2.01□□□□□ -2.09
VPS13YLL040C YSF3P0C074 85 aaPredicted RBP2.01□□□□□ -2.09
VPS13YLL040C FUN14P18411 198 aa2.01□□□□□ -2.09
VPS13YLL040C BRR6P53062 197 aa2.01□□□□□ -2.09
VPS13YLL040C DUG3P53871 357 aa2.01□□□□□ -2.09
VPS13YLL040C RIP1P08067 215 aa2.01□□□□□ -2.09
VPS13YLL040C AUR1P36107 401 aaPredicted RBP2.01□□□□□ -2.09
VPS13YLL040C CUE1P38428 203 aa2.01□□□□□ -2.09
VPS13YLL040C YHR180WP38868 163 aa2.01□□□□□ -2.09
VPS13YLL040C RPC11Q04307 110 aaPredicted RBP2.01□□□□□ -2.09
VPS13YLL040C STT4P37297 1900 aa2.01□□□□□ -2.09
VPS13YLL040C ECM34P38728 170 aa2.01□□□□□ -2.09
VPS13YLL040C YEL057CP39983 233 aa2.01□□□□□ -2.09
VPS13YLL040C ARP3P47117 449 aaKnown RBP2.01□□□□□ -2.09
VPS13YLL040C LIP2Q06005 328 aa2.01□□□□□ -2.09
VPS13YLL040C YOR186WQ08560 144 aa2.01□□□□□ -2.09
VPS13YLL040C NPC2Q12408 173 aa2.01□□□□□ -2.09
VPS13YLL040C MES1P00958 751 aaKnown RBP2.01□□□□□ -2.09
VPS13YLL040C MRS1P07266 363 aa2.01□□□□□ -2.09
VPS13YLL040C LYS1P38998 373 aaRIP-Chip data2.01□□□□□ -2.09 RIP-Chip
VPS13YLL040C YBR255C-AQ3E776 120 aa2.01□□□□□ -2.09
VPS13YLL040C RPS13P05756 151 aaKnown RBP2.01□□□□□ -2.09
VPS13YLL040C UPS2P35200 230 aa2.01□□□□□ -2.09
VPS13YLL040C CUP9P41817 306 aa2.01□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 49.5 ms