RNA–Protein interactions for RNA: YKL197C

PEX1, Transcript of AAA-peroxin, yeast

Gene PEX1, Length 3,132 nt, Biotype protein coding, Subcellular localisation Peroxisome .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PEX1	YKL197C	SOR2	Q07786	357 aa		2.99	□□□□□ -1.93
PEX1	YKL197C	SNX3	Q08826	162 aa	Known RBP	2.99	□□□□□ -1.93
PEX1	YKL197C	RPL7B	Q12213	244 aa	Known RBP	2.99	□□□□□ -1.93
PEX1	YKL197C	FRE7	Q12333	620 aa		2.99	□□□□□ -1.93
PEX1	YKL197C	MSW1	P04803	379 aa		2.98	□□□□□ -1.93
PEX1	YKL197C	RPL2A	P0CX45	254 aa	Known RBP	2.98	□□□□□ -1.93
PEX1	YKL197C	RPL2B	P0CX46	254 aa	Known RBP	2.98	□□□□□ -1.93
PEX1	YKL197C	TAH1	P25638	111 aa	Predicted RBP	2.98	□□□□□ -1.93
PEX1	YKL197C	YCR090C	P25654	182 aa	Known RBP	2.98	□□□□□ -1.93
PEX1	YKL197C	PMI40	P29952	429 aa	Known RBP	2.98	□□□□□ -1.93
PEX1	YKL197C	TMA19	P35691	167 aa	Known RBP	2.98	□□□□□ -1.93
PEX1	YKL197C	EGT2	P42835	1041 aa		2.98	□□□□□ -1.93
PEX1	YKL197C	CWP2	P43497	92 aa		2.98	□□□□□ -1.93
PEX1	YKL197C	CTR1	P49573	406 aa		2.98	□□□□□ -1.93
PEX1	YKL197C	BRR6	P53062	197 aa		2.98	□□□□□ -1.93
PEX1	YKL197C	CAB4	P53332	305 aa		2.98	□□□□□ -1.93
PEX1	YKL197C	YKR011C	Q02209	353 aa		2.98	□□□□□ -1.93
PEX1	YKL197C	LEE1	Q02799	301 aa	Known RBP	2.98	□□□□□ -1.93
PEX1	YKL197C	YMR178W	Q03219	274 aa	Known RBP	2.98	□□□□□ -1.93
PEX1	YKL197C	MSS11	Q03825	758 aa		2.98	□□□□□ -1.93
PEX1	YKL197C	RAV2	Q03956	351 aa		2.98	□□□□□ -1.93
PEX1	YKL197C	YPR114W	Q06107	315 aa		2.98	□□□□□ -1.93
PEX1	YKL197C	YPR174C	Q06616	221 aa	Predicted RBP	2.98	□□□□□ -1.93
PEX1	YKL197C	HEM25	Q07534	307 aa		2.98	□□□□□ -1.93
PEX1	YKL197C	CYC1	P00044	109 aa	Predicted RBP	2.98	□□□□□ -1.93
PEX1	YKL197C	ADH1	P00330	348 aa	Known RBP	2.98	□□□□□ -1.93
PEX1	YKL197C	ANB1	P19211	157 aa		2.98	□□□□□ -1.93
PEX1	YKL197C	GAS1	P22146	559 aa	Known RBP	2.98	□□□□□ -1.93
PEX1	YKL197C	MTC7	P32633	139 aa		2.98	□□□□□ -1.93
PEX1	YKL197C	COX13	P32799	129 aa		2.98	□□□□□ -1.93
PEX1	YKL197C	BUD8	P41698	603 aa		2.98	□□□□□ -1.93
PEX1	YKL197C	TAD2	P47058	250 aa		2.98	□□□□□ -1.93
PEX1	YKL197C	STP3	Q05937	343 aa		2.98	□□□□□ -1.93
PEX1	YKL197C	ENB1	Q08299	606 aa		2.98	□□□□□ -1.93
PEX1	YKL197C	COX1	P00401	534 aa		2.97	□□□□□ -1.93
PEX1	YKL197C	MRS1	P07266	363 aa		2.97	□□□□□ -1.93
PEX1	YKL197C	MRPL20	P22354	195 aa	Predicted RBP	2.97	□□□□□ -1.93
PEX1	YKL197C	YCR007C	P25354	239 aa		2.97	□□□□□ -1.93
PEX1	YKL197C	PUP3	P25451	205 aa	Known RBP	2.97	□□□□□ -1.93
PEX1	YKL197C	RIM1	P32445	135 aa	Known RBP	2.97	□□□□□ -1.93
PEX1	YKL197C	YPS6	P40583	537 aa		2.97	□□□□□ -1.93
PEX1	YKL197C	GON7	P46984	123 aa		2.97	□□□□□ -1.93
PEX1	YKL197C	UBR1	P19812	1950 aa		2.97	□□□□□ -1.93
PEX1	YKL197C	FMP49	A0A023PZB3	126 aa		2.97	□□□□□ -1.93
PEX1	YKL197C	DIF1	O13577	133 aa		2.97	□□□□□ -1.93
PEX1	YKL197C	RAS2	P01120	322 aa	Known RBP	2.97	□□□□□ -1.93
PEX1	YKL197C	SIR2	P06700	562 aa		2.97	□□□□□ -1.93
PEX1	YKL197C	ACB1	P31787	87 aa		2.97	□□□□□ -1.93
PEX1	YKL197C	YBR063C	P38083	404 aa		2.97	□□□□□ -1.93
PEX1	YKL197C	YEA4	P40004	342 aa		2.97	□□□□□ -1.93
PEX1	YKL197C	VFA1	P40080	203 aa		2.97	□□□□□ -1.93
PEX1	YKL197C	FLX1	P40464	311 aa		2.97	□□□□□ -1.93
PEX1	YKL197C	PRM5	P40476	318 aa		2.97	□□□□□ -1.93
PEX1	YKL197C	SNO3	P43544	222 aa		2.97	□□□□□ -1.93
PEX1	YKL197C	TOS8	P53147	276 aa		2.97	□□□□□ -1.93
PEX1	YKL197C	ERV29	P53337	310 aa		2.97	□□□□□ -1.93
PEX1	YKL197C	SNO2	P53823	222 aa		2.97	□□□□□ -1.93
PEX1	YKL197C	DUG3	P53871	357 aa		2.97	□□□□□ -1.93
PEX1	YKL197C	RNH201	P53942	307 aa		2.97	□□□□□ -1.93
PEX1	YKL197C	YML053C	Q04978	212 aa		2.97	□□□□□ -1.93
PEX1	YKL197C	CRD1	Q07560	283 aa		2.97	□□□□□ -1.93
PEX1	YKL197C	YDR029W	Q12111	104 aa		2.97	□□□□□ -1.93
PEX1	YKL197C	HUT1	Q12520	339 aa		2.97	□□□□□ -1.93
PEX1	YKL197C	COA6	Q3E846	104 aa		2.97	□□□□□ -1.93
PEX1	YKL197C	SEC4	P07560	215 aa	Known RBP	2.97	□□□□□ -1.93
PEX1	YKL197C	TOM40	P23644	387 aa	Known RBP	2.97	□□□□□ -1.93
PEX1	YKL197C	KAR4	P25583	335 aa		2.97	□□□□□ -1.93
PEX1	YKL197C	UTR5	P32630	166 aa		2.97	□□□□□ -1.93
PEX1	YKL197C	ECM33	P38248	429 aa	Known RBP	2.97	□□□□□ -1.93
PEX1	YKL197C	YER134C	P40081	178 aa		2.97	□□□□□ -1.93
PEX1	YKL197C	PAM16	P42949	149 aa		2.97	□□□□□ -1.93
PEX1	YKL197C	SMD3	P43321	101 aa	Known RBP	2.97	□□□□□ -1.93
PEX1	YKL197C	SBH1	P52870	82 aa		2.97	□□□□□ -1.93
PEX1	YKL197C	NMA2	P53204	395 aa		2.97	□□□□□ -1.93
PEX1	YKL197C	YMR087W	Q04299	284 aa		2.97	□□□□□ -1.93
PEX1	YKL197C	YMR310C	Q04867	317 aa	Predicted RBP	2.97	□□□□□ -1.93
PEX1	YKL197C	TAZ1	Q06510	381 aa		2.97	□□□□□ -1.93
PEX1	YKL197C	RRG7	Q08774	242 aa	Predicted RBP	2.97	□□□□□ -1.93
PEX1	YKL197C	YPQ1	Q12010	308 aa		2.97	□□□□□ -1.93
PEX1	YKL197C	MED11	Q99278	115 aa		2.97	□□□□□ -1.93
PEX1	YKL197C	MBF1	O14467	151 aa	Known RBP	2.96	□□□□□ -1.94
PEX1	YKL197C	MRP17	P28778	131 aa		2.96	□□□□□ -1.94
PEX1	YKL197C	MRPS9	P38120	278 aa		2.96	□□□□□ -1.94
PEX1	YKL197C	SPL2	P38839	148 aa		2.96	□□□□□ -1.94
PEX1	YKL197C	ISC1	P40015	477 aa	Known RBP	2.96	□□□□□ -1.94
PEX1	YKL197C	SPO73	P40031	143 aa		2.96	□□□□□ -1.94
PEX1	YKL197C	AIM11	P87275	137 aa		2.96	□□□□□ -1.94
PEX1	YKL197C	MRX11	Q03079	207 aa		2.96	□□□□□ -1.94
PEX1	YKL197C	VPS71	Q03433	280 aa		2.96	□□□□□ -1.94
PEX1	YKL197C	ERP1	Q05359	219 aa	Known RBP	2.96	□□□□□ -1.94
PEX1	YKL197C	NAT3	Q06504	195 aa		2.96	□□□□□ -1.94
PEX1	YKL197C	STP4	Q07351	490 aa		2.96	□□□□□ -1.94
PEX1	YKL197C	PRM3	Q08931	133 aa		2.96	□□□□□ -1.94
PEX1	YKL197C	YBR182C-A	Q8TGU6	64 aa		2.96	□□□□□ -1.94
PEX1	YKL197C	RPL28	P02406	149 aa	Known RBP	2.96	□□□□□ -1.94
PEX1	YKL197C	OPI3	P05375	206 aa		2.96	□□□□□ -1.94
PEX1	YKL197C	RFA2	P26754	273 aa	Known RBP	2.96	□□□□□ -1.94
PEX1	YKL197C	YIL012W	P40551	113 aa		2.96	□□□□□ -1.94
PEX1	YKL197C	PDR17	P53844	350 aa		2.96	□□□□□ -1.94
PEX1	YKL197C	PET191	Q02772	108 aa		2.96	□□□□□ -1.94

Retrieved 100 of 5,963 RNA–protein pairs in 72.8 ms