RNA–Protein interactions for RNA: YIL035C

CKA1, Transcript of Alpha catalytic subunit of casein kinase 2 (CK2), yeastyeast

Gene CKA1, Length 1,119 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CKA1YIL035C YAR023CD6VPM8 179 aa1.68□□□□□ -2.14
CKA1YIL035C SPO13P23624 291 aa1.68□□□□□ -2.14
CKA1YIL035C SNC2P33328 115 aa1.68□□□□□ -2.14
CKA1YIL035C KDX1P36005 433 aa1.68□□□□□ -2.14
CKA1YIL035C AVT2P39981 480 aa1.68□□□□□ -2.14
CKA1YIL035C RPL33BP41056 107 aaKnown RBP1.68□□□□□ -2.14
CKA1YIL035C YGL235WP53071 178 aa1.68□□□□□ -2.14
CKA1YIL035C YGR219WP53307 113 aa1.68□□□□□ -2.14
CKA1YIL035C DAD3P69850 94 aa1.68□□□□□ -2.14
CKA1YIL035C MAK3Q03503 176 aa1.68□□□□□ -2.14
CKA1YIL035C YPR127WQ06494 345 aa1.68□□□□□ -2.14
CKA1YIL035C NAT3Q06504 195 aa1.68□□□□□ -2.14
CKA1YIL035C FSF1Q12029 327 aaKnown RBP1.68□□□□□ -2.14
CKA1YIL035C DGK1Q12382 290 aa1.68□□□□□ -2.14
CKA1YIL035C EMC6Q12431 108 aa1.68□□□□□ -2.14
CKA1YIL035C EFG1Q3E705 233 aaKnown RBP1.68□□□□□ -2.14
CKA1YIL035C PET20Q99373 253 aa1.68□□□□□ -2.14
CKA1YIL035C PDR18P53756 1333 aa1.67□□□□□ -2.14
CKA1YIL035C YCR023CP25351 611 aa1.67□□□□□ -2.14
CKA1YIL035C PEX4P29340 183 aa1.67□□□□□ -2.14
CKA1YIL035C YOR062CP36025 268 aa1.67□□□□□ -2.14
CKA1YIL035C SHE2P36068 246 aaKnown RBP RIP-Chip data1.67□□□□□ -2.14not detected
CKA1YIL035C SLM6P38343 150 aa1.67□□□□□ -2.14
CKA1YIL035C RFC2P40348 353 aa1.67□□□□□ -2.14
CKA1YIL035C YFL019CP43576 117 aa1.67□□□□□ -2.14
CKA1YIL035C LSM1P47017 172 aaKnown RBP1.67□□□□□ -2.14
CKA1YIL035C GPI14P47088 403 aaKnown RBP1.67□□□□□ -2.14
CKA1YIL035C XPT1P47165 209 aa1.67□□□□□ -2.14
CKA1YIL035C BAT2P47176 376 aaKnown RBP1.67□□□□□ -2.14
CKA1YIL035C YNR062CP53748 327 aa1.67□□□□□ -2.14
CKA1YIL035C YDR274CP87283 123 aa1.67□□□□□ -2.14
CKA1YIL035C TMA20P89886 181 aaPredicted RBP1.67□□□□□ -2.14
CKA1YIL035C CGI121Q03705 181 aaKnown RBP1.67□□□□□ -2.14
CKA1YIL035C MRPS8Q03799 155 aa1.67□□□□□ -2.14
CKA1YIL035C RDS3Q06835 107 aaPredicted RBP1.67□□□□□ -2.14
CKA1YIL035C MEU1Q07938 337 aaKnown RBP RIP-Chip data1.67□□□□□ -2.14not detected
CKA1YIL035C YOL014WQ08110 124 aa1.67□□□□□ -2.14
CKA1YIL035C YDL180WQ12301 547 aa1.67□□□□□ -2.14
CKA1YIL035C ACP1P32463 125 aa1.66□□□□□ -2.14
CKA1YIL035C YET1P35723 206 aa1.66□□□□□ -2.14
CKA1YIL035C SRP102P36057 244 aaPredicted RBP1.66□□□□□ -2.14
CKA1YIL035C VTC1P40046 129 aaRIP-Chip data1.66□□□□□ -2.14not detected
CKA1YIL035C CIS3P47001 227 aa1.66□□□□□ -2.14
CKA1YIL035C TTI2P47168 421 aa1.66□□□□□ -2.14
CKA1YIL035C SOL1P50278 321 aa1.66□□□□□ -2.14
CKA1YIL035C SBH2P52871 88 aa1.66□□□□□ -2.14
CKA1YIL035C BOL2P53082 120 aa1.66□□□□□ -2.14
CKA1YIL035C MPC3P53311 146 aa1.66□□□□□ -2.14
CKA1YIL035C MPA43P53583 542 aaPredicted RBP1.66□□□□□ -2.14
CKA1YIL035C YDC1Q02896 317 aa1.66□□□□□ -2.14
CKA1YIL035C RRP17Q04031 235 aaPredicted RBP1.66□□□□□ -2.14
CKA1YIL035C ATO3Q12359 275 aa1.66□□□□□ -2.14
CKA1YIL035C YML100W-AQ8TGT0 57 aa1.66□□□□□ -2.14
CKA1YIL035C RPS28BP0C0X0 67 aaKnown RBP1.65□□□□□ -2.15
CKA1YIL035C NUF2P33895 451 aa1.65□□□□□ -2.15
CKA1YIL035C PHO88P38264 188 aaPredicted RBP1.65□□□□□ -2.15
CKA1YIL035C ERV15P38312 142 aa1.65□□□□□ -2.15
CKA1YIL035C SVP26P38869 228 aa1.65□□□□□ -2.15
CKA1YIL035C FCY21P40039 528 aa1.65□□□□□ -2.15
CKA1YIL035C MOG1P47123 218 aa1.65□□□□□ -2.15
CKA1YIL035C NQM1P53228 333 aaPredicted RBP1.65□□□□□ -2.15
CKA1YIL035C YNR077CP53758 84 aa1.65□□□□□ -2.15
CKA1YIL035C VPS71Q03433 280 aa1.65□□□□□ -2.15
CKA1YIL035C DAS2Q12084 232 aa1.65□□□□□ -2.15
CKA1YIL035C YLR046CQ12253 270 aa1.65□□□□□ -2.15
CKA1YIL035C RPS28AQ3E7X9 67 aaPredicted RBP1.65□□□□□ -2.15
CKA1YIL035C ATG40Q99325 256 aa1.65□□□□□ -2.15
CKA1YIL035C POR1P04840 283 aaKnown RBP1.64□□□□□ -2.15
CKA1YIL035C PHO85P17157 305 aa1.64□□□□□ -2.15
CKA1YIL035C SCL1P21243 252 aaKnown RBP1.64□□□□□ -2.15
CKA1YIL035C BUB2P26448 306 aaPredicted RBP1.64□□□□□ -2.15
CKA1YIL035C UBC8P28263 218 aa1.64□□□□□ -2.15
CKA1YIL035C YNL200CP40165 246 aaKnown RBP1.64□□□□□ -2.15
CKA1YIL035C TIR3P40552 269 aa1.64□□□□□ -2.15
CKA1YIL035C EAF6P47128 113 aa1.64□□□□□ -2.15
CKA1YIL035C LSM3P57743 89 aaKnown RBP1.64□□□□□ -2.15
CKA1YIL035C YDR476CQ03362 224 aa1.64□□□□□ -2.15
CKA1YIL035C THI74Q04083 370 aa1.64□□□□□ -2.15
CKA1YIL035C RAS2P01120 322 aaKnown RBP1.63□□□□□ -2.15
CKA1YIL035C UBI4P0CG63 381 aaKnown RBP1.63□□□□□ -2.15
CKA1YIL035C YNL217WP40152 326 aa1.63□□□□□ -2.15
CKA1YIL035C ERJ5P43613 295 aaPredicted RBP1.63□□□□□ -2.15
CKA1YIL035C YJL027CP47063 138 aaPredicted RBP1.63□□□□□ -2.15
CKA1YIL035C DAN1P47178 298 aa1.63□□□□□ -2.15
CKA1YIL035C YGL101WP53144 215 aa1.63□□□□□ -2.15
CKA1YIL035C YMR099CQ03161 297 aaKnown RBP1.63□□□□□ -2.15
CKA1YIL035C YMR295CQ03559 197 aa1.63□□□□□ -2.15
CKA1YIL035C PET54P10834 293 aa1.62□□□□□ -2.15
CKA1YIL035C TIR1P10863 254 aa1.62□□□□□ -2.15
CKA1YIL035C CSH1P38287 376 aa1.62□□□□□ -2.15
CKA1YIL035C FYV4P38783 130 aaPredicted RBP1.62□□□□□ -2.15
CKA1YIL035C APQ12P40532 138 aa1.62□□□□□ -2.15
CKA1YIL035C YFR054CP43622 192 aa1.62□□□□□ -2.15
CKA1YIL035C YPR202WQ08993 238 aa1.62□□□□□ -2.15
CKA1YIL035C YOR1P53049 1477 aa1.62□□□□□ -2.15
CKA1YIL035C YLR236CA0A023PZG4 107 aa1.61□□□□□ -2.15
CKA1YIL035C DDI2P0CH63 225 aa1.61□□□□□ -2.15
CKA1YIL035C DDI3P0CH64 225 aa1.61□□□□□ -2.15
CKA1YIL035C PBI2P0CT04 75 aaKnown RBP1.61□□□□□ -2.15
CKA1YIL035C RPL2AP0CX45 254 aaKnown RBP1.61□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 22.6 ms