RNA–Protein interactions for RNA: YGR239C

PEX21, Transcript of Peroxin required for peroxisomal matrix protein targeting, yeastyeast

Gene PEX21, Length 867 nt, Biotype protein coding, Subcellular localisation Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEX21YGR239C TMA22P47089 198 aaPredicted RBP2.5□□□□□ -2.01
PEX21YGR239C YMR315WQ04869 349 aaKnown RBP2.5□□□□□ -2.01
PEX21YGR239C REV3P14284 1504 aa2.5□□□□□ -2.01
PEX21YGR239C SPT6P23615 1451 aaKnown RBP2.5□□□□□ -2.01
PEX21YGR239C BUD4P47136 1447 aa2.5□□□□□ -2.01
PEX21YGR239C FAS1P07149 2051 aaKnown RBP2.49□□□□□ -2.01
PEX21YGR239C MGT1P26188 188 aa2.49□□□□□ -2.01
PEX21YGR239C YEA4P40004 342 aa2.49□□□□□ -2.01
PEX21YGR239C FMP32P43557 207 aa2.49□□□□□ -2.01
PEX21YGR239C YNL247WP53852 767 aaKnown RBP2.49□□□□□ -2.01
PEX21YGR239C NUP49Q02199 472 aa2.49□□□□□ -2.01
PEX21YGR239C YMR099CQ03161 297 aaKnown RBP2.49□□□□□ -2.01
PEX21YGR239C YOR342CQ12182 319 aa2.49□□□□□ -2.01
PEX21YGR239C YLR422WQ06409 1932 aa2.48□□□□□ -2.01
PEX21YGR239C AHC2P25649 128 aa2.48□□□□□ -2.01
PEX21YGR239C ARC19P33204 171 aaKnown RBP2.48□□□□□ -2.01
PEX21YGR239C NRG2P38082 220 aa2.48□□□□□ -2.01
PEX21YGR239C YER134CP40081 178 aa2.48□□□□□ -2.01
PEX21YGR239C ODC2Q99297 307 aa2.48□□□□□ -2.01
PEX21YGR239C CYR1P08678 2026 aaKnown RBP2.47□□□□□ -2.01
PEX21YGR239C POR1P04840 283 aaKnown RBP2.47□□□□□ -2.01
PEX21YGR239C QCR2P07257 368 aa2.47□□□□□ -2.01
PEX21YGR239C FZF1P32805 299 aa2.47□□□□□ -2.01
PEX21YGR239C MTW1P39731 289 aa2.47□□□□□ -2.01
PEX21YGR239C YER121WP40076 114 aa2.47□□□□□ -2.01
PEX21YGR239C YNL140CP53910 189 aa2.47□□□□□ -2.01
PEX21YGR239C SMD2Q06217 110 aaKnown RBP2.47□□□□□ -2.01
PEX21YGR239C FSF1Q12029 327 aaKnown RBP2.47□□□□□ -2.01
PEX21YGR239C NSP1P14907 823 aaKnown RBP2.46□□□□□ -2.02
PEX21YGR239C YKL102CP34249 101 aa2.46□□□□□ -2.02
PEX21YGR239C CLG1P35190 452 aa2.46□□□□□ -2.02
PEX21YGR239C KDX1P36005 433 aa2.46□□□□□ -2.02
PEX21YGR239C YMR295CQ03559 197 aa2.46□□□□□ -2.02
PEX21YGR239C DYN3Q04949 312 aa2.46□□□□□ -2.02
PEX21YGR239C ECM5Q03214 1411 aa2.45□□□□□ -2.02
PEX21YGR239C YAR023CD6VPM8 179 aa2.45□□□□□ -2.02
PEX21YGR239C DDI2P0CH63 225 aa2.45□□□□□ -2.02
PEX21YGR239C DDI3P0CH64 225 aa2.45□□□□□ -2.02
PEX21YGR239C ARO7P32178 256 aa2.45□□□□□ -2.02
PEX21YGR239C MAK5P38112 773 aaPredicted RBP2.45□□□□□ -2.02
PEX21YGR239C DSE2P38844 325 aa2.45□□□□□ -2.02
PEX21YGR239C GPI14P47088 403 aaKnown RBP2.45□□□□□ -2.02
PEX21YGR239C JAC1P53193 184 aa2.45□□□□□ -2.02
PEX21YGR239C PGA1P53896 198 aa2.45□□□□□ -2.02
PEX21YGR239C MPD1Q12404 318 aaKnown RBP2.45□□□□□ -2.02
PEX21YGR239C ATG40Q99325 256 aa2.45□□□□□ -2.02
PEX21YGR239C FMP23P38231 175 aa2.44□□□□□ -2.02
PEX21YGR239C TDA4P47153 279 aa2.44□□□□□ -2.02
PEX21YGR239C SAY1P53324 424 aa2.44□□□□□ -2.02
PEX21YGR239C GPI17Q04080 534 aa2.44□□□□□ -2.02
PEX21YGR239C HPT1Q04178 221 aaKnown RBP2.44□□□□□ -2.02
PEX21YGR239C SML1Q04964 104 aa2.44□□□□□ -2.02
PEX21YGR239C YLR050CQ12155 161 aaKnown RBP2.44□□□□□ -2.02
PEX21YGR239C PEP1P32319 1579 aa2.44□□□□□ -2.02
PEX21YGR239C AME1P38313 324 aa2.43□□□□□ -2.02
PEX21YGR239C SVP26P38869 228 aa2.43□□□□□ -2.02
PEX21YGR239C YFL019CP43576 117 aa2.43□□□□□ -2.02
PEX21YGR239C ERJ5P43613 295 aaPredicted RBP2.43□□□□□ -2.02
PEX21YGR239C MPC3P53311 146 aa2.43□□□□□ -2.02
PEX21YGR239C PLP1Q04004 230 aa2.43□□□□□ -2.02
PEX21YGR239C BPT1P14772 1559 aa2.43□□□□□ -2.02
PEX21YGR239C FLO9P39712 1322 aa2.42□□□□□ -2.02
PEX21YGR239C MYO2P19524 1574 aaKnown RBP2.42□□□□□ -2.02
PEX21YGR239C YLR236CA0A023PZG4 107 aa2.42□□□□□ -2.02
PEX21YGR239C QCR6P00127 147 aa2.42□□□□□ -2.02
PEX21YGR239C CMD1P06787 147 aaKnown RBP2.42□□□□□ -2.02
PEX21YGR239C SPO13P23624 291 aa2.42□□□□□ -2.02
PEX21YGR239C NSG1P38837 291 aa2.42□□□□□ -2.02
PEX21YGR239C GAA1P39012 614 aa2.42□□□□□ -2.02
PEX21YGR239C SBH1P52870 82 aa2.42□□□□□ -2.02
PEX21YGR239C YGL235WP53071 178 aa2.42□□□□□ -2.02
PEX21YGR239C DIG2Q03373 323 aaKnown RBP2.42□□□□□ -2.02
PEX21YGR239C BOL1Q3E793 110 aa2.42□□□□□ -2.02
PEX21YGR239C HIR3P47171 1648 aa2.42□□□□□ -2.02
PEX21YGR239C YCF1P39109 1515 aaKnown RBP2.42□□□□□ -2.02
PEX21YGR239C SSK2P53599 1579 aa2.41□□□□□ -2.02
PEX21YGR239C MDH2P22133 377 aa2.41□□□□□ -2.02
PEX21YGR239C TVP38P36164 337 aa2.41□□□□□ -2.02
PEX21YGR239C YBR209WP38311 105 aa2.41□□□□□ -2.02
PEX21YGR239C PEP8P40335 379 aa2.41□□□□□ -2.02
PEX21YGR239C YFH7P43591 353 aa2.41□□□□□ -2.02
PEX21YGR239C VPS71Q03433 280 aa2.41□□□□□ -2.02
PEX21YGR239C RAD28Q12021 506 aa2.41□□□□□ -2.02
PEX21YGR239C DGK1Q12382 290 aa2.41□□□□□ -2.02
PEX21YGR239C DUR1,2P32528 1835 aaKnown RBP2.4□□□□□ -2.02
PEX21YGR239C SHE2P36068 246 aaKnown RBP RIP-Chip data2.4□□□□□ -2.03not detected
PEX21YGR239C PAM17P36147 197 aa2.4□□□□□ -2.03
PEX21YGR239C FES1P38260 290 aa2.4□□□□□ -2.03
PEX21YGR239C RFC2P40348 353 aa2.4□□□□□ -2.03
PEX21YGR239C CUP9P41817 306 aa2.4□□□□□ -2.03
PEX21YGR239C CUE4Q04201 117 aaPredicted RBP2.4□□□□□ -2.03
PEX21YGR239C NAT3Q06504 195 aa2.4□□□□□ -2.03
PEX21YGR239C IRC23Q08416 157 aa2.4□□□□□ -2.03
PEX21YGR239C ATG2P53855 1592 aa2.4□□□□□ -2.03
PEX21YGR239C IGO1P53897 168 aa2.39□□□□□ -2.03
PEX21YGR239C LTE1P07866 1435 aa2.38□□□□□ -2.03
PEX21YGR239C RPS28BP0C0X0 67 aaKnown RBP2.38□□□□□ -2.03
PEX21YGR239C TFC1P32367 649 aa2.38□□□□□ -2.03
PEX21YGR239C AYR1P40471 297 aa2.38□□□□□ -2.03
PEX21YGR239C SOL1P50278 321 aa2.38□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 19.9 ms