RNA–Protein interactions for RNA: YGR193C

PDX1, Transcript of E3-binding protein of the mitochondrial pyruvate dehydrogenase complex, yeast

Gene PDX1, Length 1,233 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PDX1	YGR193C	SPT4	P32914	102 aa	Predicted RBP	3.11	□□□□□ -1.91
PDX1	YGR193C	MTR2	P34232	184 aa	Known RBP	3.11	□□□□□ -1.91
PDX1	YGR193C	YIL024C	P40543	189 aa		3.11	□□□□□ -1.91
PDX1	YGR193C	AIM25	P47140	327 aa		3.11	□□□□□ -1.91
PDX1	YGR193C	UBC13	P52490	153 aa		3.11	□□□□□ -1.91
PDX1	YGR193C	YIP4	P53093	235 aa		3.11	□□□□□ -1.91
PDX1	YGR193C	MRH4	P53166	561 aa		3.11	□□□□□ -1.91
PDX1	YGR193C	YGR151C	P53287	111 aa		3.11	□□□□□ -1.91
PDX1	YGR193C	SAY1	P53324	424 aa		3.11	□□□□□ -1.91
PDX1	YGR193C	FMP41	P53889	259 aa	Known RBP	3.11	□□□□□ -1.91
PDX1	YGR193C	LSM7	P53905	115 aa	Known RBP	3.11	□□□□□ -1.91
PDX1	YGR193C	GPI11	Q06636	219 aa		3.11	□□□□□ -1.91
PDX1	YGR193C	MCH4	Q08268	501 aa		3.11	□□□□□ -1.91
PDX1	YGR193C	NCE102	Q12207	173 aa	RIP-Chip data	3.11	□□□□□ -1.91	not detected
PDX1	YGR193C	PRR2	Q12310	699 aa		3.11	□□□□□ -1.91
PDX1	YGR193C	MPD1	Q12404	318 aa	Known RBP	3.11	□□□□□ -1.91
PDX1	YGR193C	YPR064W	Q12492	139 aa		3.11	□□□□□ -1.91
PDX1	YGR193C	RPL30	P14120	105 aa	Known RBP	3.1	□□□□□ -1.91
PDX1	YGR193C	STE4	P18851	423 aa		3.1	□□□□□ -1.91
PDX1	YGR193C	FUN19	P28003	413 aa	Predicted RBP	3.1	□□□□□ -1.91
PDX1	YGR193C	COX13	P32799	129 aa		3.1	□□□□□ -1.91
PDX1	YGR193C	CLB6	P32943	380 aa		3.1	□□□□□ -1.91
PDX1	YGR193C	APS1	P35181	156 aa		3.1	□□□□□ -1.91
PDX1	YGR193C	MCR1	P36060	302 aa	Known RBP	3.1	□□□□□ -1.91
PDX1	YGR193C	YKR070W	P36151	352 aa	Known RBP	3.1	□□□□□ -1.91
PDX1	YGR193C	YMC2	P38087	329 aa		3.1	□□□□□ -1.91
PDX1	YGR193C	TRS20	P38334	175 aa		3.1	□□□□□ -1.91
PDX1	YGR193C	YHK8	P38776	514 aa		3.1	□□□□□ -1.91
PDX1	YGR193C	TEM1	P38987	245 aa		3.1	□□□□□ -1.91
PDX1	YGR193C	HMS2	P47175	358 aa		3.1	□□□□□ -1.91
PDX1	YGR193C	YPS5	P53057	165 aa		3.1	□□□□□ -1.91
PDX1	YGR193C	PGA1	P53896	198 aa		3.1	□□□□□ -1.91
PDX1	YGR193C	SWS2	P53937	143 aa		3.1	□□□□□ -1.91
PDX1	YGR193C	IRC15	Q02733	499 aa		3.1	□□□□□ -1.91
PDX1	YGR193C	PET191	Q02772	108 aa		3.1	□□□□□ -1.91
PDX1	YGR193C	UPS3	Q04006	179 aa		3.1	□□□□□ -1.91
PDX1	YGR193C	MCT1	Q12283	360 aa		3.1	□□□□□ -1.91
PDX1	YGR193C	YPS3	Q12303	508 aa		3.1	□□□□□ -1.91
PDX1	YGR193C	COA6	Q3E846	104 aa		3.1	□□□□□ -1.91
PDX1	YGR193C	YIL177C	P40434	1758 aa		3.1	□□□□□ -1.91
PDX1	YGR193C	YJL225C	P40889	1758 aa		3.1	□□□□□ -1.91
PDX1	YGR193C	GEA1	P47102	1408 aa	Predicted RBP	3.1	□□□□□ -1.91
PDX1	YGR193C	PAI3	P01094	68 aa		3.09	□□□□□ -1.91
PDX1	YGR193C	INO4	P13902	151 aa		3.09	□□□□□ -1.91
PDX1	YGR193C	MRPL20	P22354	195 aa	Predicted RBP	3.09	□□□□□ -1.91
PDX1	YGR193C	SRP21	P32342	167 aa		3.09	□□□□□ -1.91
PDX1	YGR193C	CDC5	P32562	705 aa		3.09	□□□□□ -1.91
PDX1	YGR193C	LAG1	P38703	411 aa		3.09	□□□□□ -1.91
PDX1	YGR193C	ARN2	P38724	620 aa		3.09	□□□□□ -1.91
PDX1	YGR193C	PRM5	P40476	318 aa		3.09	□□□□□ -1.91
PDX1	YGR193C	OST1	P41543	476 aa	Known RBP	3.09	□□□□□ -1.91
PDX1	YGR193C	PFS2	P42841	465 aa	Known RBP	3.09	□□□□□ -1.91
PDX1	YGR193C	PAM16	P42949	149 aa		3.09	□□□□□ -1.91
PDX1	YGR193C	GPI2	P46961	280 aa		3.09	□□□□□ -1.91
PDX1	YGR193C	ARP3	P47117	449 aa	Known RBP	3.09	□□□□□ -1.91
PDX1	YGR193C	TOS2	P50078	622 aa		3.09	□□□□□ -1.91
PDX1	YGR193C	YDR415C	Q04033	374 aa	Predicted RBP	3.09	□□□□□ -1.91
PDX1	YGR193C	YMR103C	Q04436	120 aa		3.09	□□□□□ -1.91
PDX1	YGR193C	SPG4	Q04438	115 aa		3.09	□□□□□ -1.91
PDX1	YGR193C	KEI1	Q06346	221 aa		3.09	□□□□□ -1.91
PDX1	YGR193C	LOA1	Q06508	300 aa		3.09	□□□□□ -1.91
PDX1	YGR193C	YDL057W	Q07379	328 aa		3.09	□□□□□ -1.91
PDX1	YGR193C	YDL218W	Q07629	317 aa		3.09	□□□□□ -1.91
PDX1	YGR193C	YDL180W	Q12301	547 aa		3.09	□□□□□ -1.91
PDX1	YGR193C	IRC20	Q06554	1556 aa		3.08	□□□□□ -1.92
PDX1	YGR193C	ESC1	Q03661	1658 aa	Known RBP	3.08	□□□□□ -1.92
PDX1	YGR193C	SUC2	P00724	532 aa		3.08	□□□□□ -1.92
PDX1	YGR193C	HMRA1	P0CY11	126 aa		3.08	□□□□□ -1.92
PDX1	YGR193C	MRS3	P10566	314 aa		3.08	□□□□□ -1.92
PDX1	YGR193C	COX10	P21592	462 aa		3.08	□□□□□ -1.92
PDX1	YGR193C	FMP46	P36141	133 aa	Known RBP	3.08	□□□□□ -1.92
PDX1	YGR193C	YBR063C	P38083	404 aa		3.08	□□□□□ -1.92
PDX1	YGR193C	MRP21	P38175	177 aa		3.08	□□□□□ -1.92
PDX1	YGR193C	ATG12	P38316	186 aa		3.08	□□□□□ -1.92
PDX1	YGR193C	YHR140W	P38842	239 aa		3.08	□□□□□ -1.92
PDX1	YGR193C	YJL213W	P40896	331 aa		3.08	□□□□□ -1.92
PDX1	YGR193C	CAT5	P41735	233 aa		3.08	□□□□□ -1.92
PDX1	YGR193C	BAT2	P47176	376 aa	Known RBP	3.08	□□□□□ -1.92
PDX1	YGR193C	GEP7	P53171	287 aa		3.08	□□□□□ -1.92
PDX1	YGR193C	YGL034C	P53186	121 aa		3.08	□□□□□ -1.92
PDX1	YGR193C	VHT1	P53241	593 aa		3.08	□□□□□ -1.92
PDX1	YGR193C	SPR6	Q01684	191 aa		3.08	□□□□□ -1.92
PDX1	YGR193C	YOL159C	Q08300	171 aa		3.08	□□□□□ -1.92
PDX1	YGR193C	IES4	Q08561	116 aa		3.08	□□□□□ -1.92
PDX1	YGR193C	IZH2	Q12442	317 aa		3.08	□□□□□ -1.92
PDX1	YGR193C	TSC3	Q3E790	80 aa		3.08	□□□□□ -1.92
PDX1	YGR193C	Q0010	Q9ZZX9	128 aa		3.08	□□□□□ -1.92
PDX1	YGR193C	CAT8	P39113	1433 aa		3.08	□□□□□ -1.92
PDX1	YGR193C	MYO2	P19524	1574 aa	Known RBP	3.08	□□□□□ -1.92
PDX1	YGR193C	TY1B-BR	Q12193	1756 aa		3.07	□□□□□ -1.92
PDX1	YGR193C	YAL064W-B	O13512	126 aa		3.07	□□□□□ -1.92
PDX1	YGR193C	ATG15	P25641	520 aa		3.07	□□□□□ -1.92
PDX1	YGR193C	RPL14A	P36105	138 aa	Known RBP	3.07	□□□□□ -1.92
PDX1	YGR193C	MRPL39	P36533	70 aa		3.07	□□□□□ -1.92
PDX1	YGR193C	SDH4	P37298	181 aa		3.07	□□□□□ -1.92
PDX1	YGR193C	YER181C	P40097	107 aa		3.07	□□□□□ -1.92
PDX1	YGR193C	SWM2	P40342	146 aa		3.07	□□□□□ -1.92
PDX1	YGR193C	EAF6	P47128	113 aa		3.07	□□□□□ -1.92
PDX1	YGR193C	ERG25	P53045	309 aa		3.07	□□□□□ -1.92
PDX1	YGR193C	RNH201	P53942	307 aa		3.07	□□□□□ -1.92

Retrieved 100 of 5,963 RNA–protein pairs in 15.4 ms