RNA–Protein interactions for RNA: YGR048W

UFD1, Transcript of Substrate-recruiting cofactor of the Cdc48p-Npl4p-Ufd1p segregase, yeastyeast

Gene UFD1, Length 1,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UFD1YGR048W GTO3Q04806 366 aa7.03□□□□□ -1.28
UFD1YGR048W PRM3Q08931 133 aa7.03□□□□□ -1.28
UFD1YGR048W PIN2Q12057 282 aa7.03□□□□□ -1.28
UFD1YGR048W PEX11Q12462 236 aa7.03□□□□□ -1.28
UFD1YGR048W CCH1P50077 2039 aa7.03□□□□□ -1.28
UFD1YGR048W FMP49A0A023PZB3 126 aa7.02□□□□□ -1.29
UFD1YGR048W SAG1P20840 650 aa7.02□□□□□ -1.29
UFD1YGR048W ADK2P26364 225 aa7.02□□□□□ -1.29
UFD1YGR048W SPS18P32572 300 aa7.02□□□□□ -1.29
UFD1YGR048W UGX2P32772 223 aa7.02□□□□□ -1.29
UFD1YGR048W MAC1P35192 417 aa7.02□□□□□ -1.29
UFD1YGR048W PHD1P36093 366 aa7.02□□□□□ -1.29
UFD1YGR048W DAD2P36162 133 aa7.02□□□□□ -1.29
UFD1YGR048W CBP4P37267 147 aa7.02□□□□□ -1.29
UFD1YGR048W DOG2P38773 246 aa7.02□□□□□ -1.29
UFD1YGR048W SEC72P39742 193 aaKnown RBP7.02□□□□□ -1.29
UFD1YGR048W YND1P40009 630 aa7.02□□□□□ -1.29
UFD1YGR048W XBP1P40489 647 aa7.02□□□□□ -1.29
UFD1YGR048W SNO3P43544 222 aa7.02□□□□□ -1.29
UFD1YGR048W SNO2P53823 222 aa7.02□□□□□ -1.29
UFD1YGR048W STP3Q05937 343 aa7.02□□□□□ -1.29
UFD1YGR048W PFA4Q12006 378 aa7.02□□□□□ -1.29
UFD1YGR048W MCP1Q12106 302 aa7.02□□□□□ -1.29
UFD1YGR048W YOS1Q3E834 85 aa7.02□□□□□ -1.29
UFD1YGR048W INO4P13902 151 aa7.01□□□□□ -1.29
UFD1YGR048W HYP2P23301 157 aaKnown RBP7.01□□□□□ -1.29
UFD1YGR048W ZRT1P32804 376 aa7.01□□□□□ -1.29
UFD1YGR048W DUT1P33317 147 aa7.01□□□□□ -1.29
UFD1YGR048W VBA2P38358 474 aaKnown RBP7.01□□□□□ -1.29
UFD1YGR048W YHR130CP38834 111 aa7.01□□□□□ -1.29
UFD1YGR048W HIT1P46973 164 aa7.01□□□□□ -1.29
UFD1YGR048W SCW4P53334 386 aaKnown RBP7.01□□□□□ -1.29
UFD1YGR048W RPL21AQ02753 160 aaKnown RBP7.01□□□□□ -1.29
UFD1YGR048W YML079WQ03629 201 aa7.01□□□□□ -1.29
UFD1YGR048W SDH7Q04401 133 aa7.01□□□□□ -1.29
UFD1YGR048W RPL21BQ12672 160 aaKnown RBP7.01□□□□□ -1.29
UFD1YGR048W YIL102C-AQ2V2P5 75 aa7.01□□□□□ -1.29
UFD1YGR048W DET1Q99288 334 aaKnown RBP7.01□□□□□ -1.29
UFD1YGR048W YDR157WA0A023PZE8 133 aa7□□□□□ -1.29
UFD1YGR048W MCK1P21965 375 aaKnown RBP7□□□□□ -1.29
UFD1YGR048W MRS4P23500 304 aa7□□□□□ -1.29
UFD1YGR048W RNQ1P25367 405 aa7□□□□□ -1.29
UFD1YGR048W RAD23P32628 398 aaKnown RBP7□□□□□ -1.29
UFD1YGR048W CSE2P33308 149 aa7□□□□□ -1.29
UFD1YGR048W MCH2P36032 473 aa7□□□□□ -1.29
UFD1YGR048W YHR127WP38833 243 aaKnown RBP7□□□□□ -1.29
UFD1YGR048W SHO1P40073 367 aa7□□□□□ -1.29
UFD1YGR048W BTT1P40314 149 aaPredicted RBP7□□□□□ -1.29
UFD1YGR048W YIL169CP40442 995 aa7□□□□□ -1.29
UFD1YGR048W YIR016WP40572 265 aa7□□□□□ -1.29
UFD1YGR048W CAB4P53332 305 aa7□□□□□ -1.29
UFD1YGR048W YMR206WQ03695 313 aa7□□□□□ -1.29
UFD1YGR048W YPR098CQ06089 161 aa7□□□□□ -1.29
UFD1YGR048W PRP11Q07350 266 aaPredicted RBP7□□□□□ -1.29
UFD1YGR048W GAS1P22146 559 aaKnown RBP6.99□□□□□ -1.29
UFD1YGR048W YCR025CP25352 136 aa6.99□□□□□ -1.29
UFD1YGR048W AHT1P29589 182 aa6.99□□□□□ -1.29
UFD1YGR048W YKL107WP34251 309 aa6.99□□□□□ -1.29
UFD1YGR048W WSC4P38739 605 aa6.99□□□□□ -1.29
UFD1YGR048W YHR138CP38841 114 aaPredicted RBP6.99□□□□□ -1.29
UFD1YGR048W ERJ5P43613 295 aaPredicted RBP6.99□□□□□ -1.29
UFD1YGR048W COQ5P49017 307 aa6.99□□□□□ -1.29
UFD1YGR048W UBC9P50623 157 aaPredicted RBP6.99□□□□□ -1.29
UFD1YGR048W RCR2Q03446 210 aaKnown RBP6.99□□□□□ -1.29
UFD1YGR048W SNT309Q06091 175 aaPredicted RBP6.99□□□□□ -1.29
UFD1YGR048W MCT1Q12283 360 aa6.99□□□□□ -1.29
UFD1YGR048W ATO3Q12359 275 aa6.99□□□□□ -1.29
UFD1YGR048W ISD11Q6Q560 94 aa6.99□□□□□ -1.29
UFD1YGR048W YKR070WP36151 352 aaKnown RBP6.98□□□□□ -1.29
UFD1YGR048W NTC20P38302 140 aaPredicted RBP6.98□□□□□ -1.29
UFD1YGR048W DUO1P53168 247 aaKnown RBP6.98□□□□□ -1.29
UFD1YGR048W GRH1Q04410 372 aaKnown RBP6.98□□□□□ -1.29
UFD1YGR048W YMR310CQ04867 317 aaPredicted RBP6.98□□□□□ -1.29
UFD1YGR048W RPS22BQ3E7Y3 130 aaKnown RBP6.98□□□□□ -1.29
UFD1YGR048W COX10P21592 462 aa6.97□□□□□ -1.29
UFD1YGR048W MDH2P22133 377 aa6.97□□□□□ -1.29
UFD1YGR048W MTC7P32633 139 aa6.97□□□□□ -1.29
UFD1YGR048W AGA2P32781 87 aa6.97□□□□□ -1.29
UFD1YGR048W GPX1P36014 167 aa6.97□□□□□ -1.29
UFD1YGR048W CMC1P36064 111 aa6.97□□□□□ -1.29
UFD1YGR048W AUR1P36107 401 aaPredicted RBP6.97□□□□□ -1.29
UFD1YGR048W MRPL24P36525 258 aaPredicted RBP6.97□□□□□ -1.29
UFD1YGR048W BUD8P41698 603 aa6.97□□□□□ -1.29
UFD1YGR048W TOS2P50078 622 aa6.97□□□□□ -1.29
UFD1YGR048W YGL235WP53071 178 aa6.97□□□□□ -1.29
UFD1YGR048W SUR7P54003 302 aa6.97□□□□□ -1.29
UFD1YGR048W YLR122CQ12312 125 aa6.97□□□□□ -1.29
UFD1YGR048W YCR024C-BQ3E7Z8 88 aa6.97□□□□□ -1.29
UFD1YGR048W COA2Q3E823 68 aa6.97□□□□□ -1.29
UFD1YGR048W STE7P06784 515 aa6.96□□□□□ -1.3
UFD1YGR048W HEM13P11353 328 aaKnown RBP6.96□□□□□ -1.3
UFD1YGR048W SPO13P23624 291 aa6.96□□□□□ -1.3
UFD1YGR048W AZF1P41696 914 aa6.96□□□□□ -1.3
UFD1YGR048W YFL065CP43539 102 aa6.96□□□□□ -1.3
UFD1YGR048W GPI2P46961 280 aa6.96□□□□□ -1.3
UFD1YGR048W MIC27P50945 234 aa6.96□□□□□ -1.3
UFD1YGR048W TRM112P53738 135 aaPredicted RBP6.96□□□□□ -1.3
UFD1YGR048W ATG4P53867 494 aa6.96□□□□□ -1.3
UFD1YGR048W ATG21Q02887 496 aa6.96□□□□□ -1.3
UFD1YGR048W RIM9Q04734 239 aa6.96□□□□□ -1.3
Retrieved 100 of 5,963 RNA–protein pairs in 20.8 ms