RNA–Protein interactions for RNA: YFL008W

SMC1, Transcript of Subunit of the multiprotein cohesin complex, yeastyeast

Gene SMC1, Length 3,678 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMC1YFL008W YCR102CP25608 368 aa0.84□□□□□ -2.28
SMC1YFL008W ARO4P32449 370 aaKnown RBP0.84□□□□□ -2.28
SMC1YFL008W SUR1P33300 382 aa0.84□□□□□ -2.28
SMC1YFL008W SRY1P36007 326 aa0.84□□□□□ -2.28
SMC1YFL008W YCR087C-AP37263 153 aa0.84□□□□□ -2.28
SMC1YFL008W PHO89P38361 574 aa0.84□□□□□ -2.28
SMC1YFL008W YHL044WP38727 235 aa0.84□□□□□ -2.28
SMC1YFL008W DOG1P38774 246 aa0.84□□□□□ -2.28
SMC1YFL008W AVT2P39981 480 aa0.84□□□□□ -2.28
SMC1YFL008W TIF34P40217 347 aaKnown RBP0.84□□□□□ -2.28
SMC1YFL008W EMC5P40540 141 aa0.84□□□□□ -2.28
SMC1YFL008W MSL1P40567 111 aaPredicted RBP0.84□□□□□ -2.28
SMC1YFL008W ERG10P41338 398 aaKnown RBP0.84□□□□□ -2.28
SMC1YFL008W OTU1P43558 301 aa0.84□□□□□ -2.28
SMC1YFL008W IBA57P47158 497 aa0.84□□□□□ -2.28
SMC1YFL008W GEP7P53171 287 aa0.84□□□□□ -2.28
SMC1YFL008W TIM21P53220 239 aa0.84□□□□□ -2.28
SMC1YFL008W BIO4P53630 237 aa0.84□□□□□ -2.28
SMC1YFL008W MPP6P53725 186 aaPredicted RBP0.84□□□□□ -2.28
SMC1YFL008W ALG11P53954 548 aaKnown RBP0.84□□□□□ -2.28
SMC1YFL008W RHO3Q00245 231 aaKnown RBP0.84□□□□□ -2.28
SMC1YFL008W ABF2Q02486 183 aa0.84□□□□□ -2.28
SMC1YFL008W VPS28Q02767 242 aa0.84□□□□□ -2.28
SMC1YFL008W YMR166CQ03829 368 aa0.84□□□□□ -2.28
SMC1YFL008W RAV2Q03956 351 aa0.84□□□□□ -2.28
SMC1YFL008W ADH6Q04894 360 aaKnown RBP0.84□□□□□ -2.28
SMC1YFL008W MCH1Q07376 486 aa0.84□□□□□ -2.28
SMC1YFL008W SCP1Q08873 200 aa0.84□□□□□ -2.28
SMC1YFL008W YOR342CQ12182 319 aa0.84□□□□□ -2.28
SMC1YFL008W YLR126CQ12288 251 aa0.84□□□□□ -2.28
SMC1YFL008W ISA2Q12425 185 aa0.84□□□□□ -2.28
SMC1YFL008W RDI1Q12434 202 aa0.84□□□□□ -2.28
SMC1YFL008W FOL3Q12676 427 aaPredicted RBP0.84□□□□□ -2.28
SMC1YFL008W KTI11Q3E840 82 aa0.84□□□□□ -2.28
SMC1YFL008W TEL1P38110 2787 aa0.83□□□□□ -2.28
SMC1YFL008W RAS2P01120 322 aaKnown RBP0.83□□□□□ -2.28
SMC1YFL008W SGA1P08019 549 aa0.83□□□□□ -2.28
SMC1YFL008W PAU19P0CE85 124 aa0.83□□□□□ -2.28
SMC1YFL008W PAU21P0CE86 164 aa0.83□□□□□ -2.28
SMC1YFL008W PAU22P0CE87 164 aa0.83□□□□□ -2.28
SMC1YFL008W GAL3P13045 520 aa0.83□□□□□ -2.28
SMC1YFL008W MAK31P23059 88 aa0.83□□□□□ -2.28
SMC1YFL008W RSA4P25382 515 aaKnown RBP0.83□□□□□ -2.28
SMC1YFL008W PAU3P25610 124 aa0.83□□□□□ -2.28
SMC1YFL008W OCH1P31755 480 aa0.83□□□□□ -2.28
SMC1YFL008W GPI18P38211 433 aa0.83□□□□□ -2.28
SMC1YFL008W YBR032WP38223 100 aa0.83□□□□□ -2.28
SMC1YFL008W YPC1P38298 316 aa0.83□□□□□ -2.28
SMC1YFL008W TAE1P38340 232 aa0.83□□□□□ -2.28
SMC1YFL008W YBR285WP38354 144 aa0.83□□□□□ -2.28
SMC1YFL008W YHR127WP38833 243 aaKnown RBP0.83□□□□□ -2.28
SMC1YFL008W ASP1P38986 381 aaPredicted RBP0.83□□□□□ -2.28
SMC1YFL008W PRM9P39551 298 aa0.83□□□□□ -2.28
SMC1YFL008W GCV3P39726 170 aaPredicted RBP0.83□□□□□ -2.28
SMC1YFL008W YIR035CP40579 254 aa0.83□□□□□ -2.28
SMC1YFL008W GDS1P41913 522 aa0.83□□□□□ -2.28
SMC1YFL008W HIT1P46973 164 aa0.83□□□□□ -2.28
SMC1YFL008W YJL144WP47009 104 aa0.83□□□□□ -2.28
SMC1YFL008W JHD2P47156 728 aaPredicted RBP0.83□□□□□ -2.28
SMC1YFL008W RIB4P50861 169 aaPredicted RBP0.83□□□□□ -2.28
SMC1YFL008W YGL185CP53100 379 aa0.83□□□□□ -2.28
SMC1YFL008W YNL033WP53964 284 aa0.83□□□□□ -2.28
SMC1YFL008W YNL019CP53975 284 aa0.83□□□□□ -2.28
SMC1YFL008W YDR286CQ05530 114 aa0.83□□□□□ -2.28
SMC1YFL008W ATG39Q06159 398 aa0.83□□□□□ -2.28
SMC1YFL008W YLR446WQ06204 433 aa0.83□□□□□ -2.28
SMC1YFL008W YPR147CQ06522 304 aaKnown RBP0.83□□□□□ -2.28
SMC1YFL008W ARR2Q06597 130 aa0.83□□□□□ -2.28
SMC1YFL008W GPM2Q12008 311 aa0.83□□□□□ -2.28
SMC1YFL008W PER33Q12144 273 aa0.83□□□□□ -2.28
SMC1YFL008W SIA1Q12212 622 aa0.83□□□□□ -2.28
SMC1YFL008W RRP42Q12277 265 aaPredicted RBP0.83□□□□□ -2.28
SMC1YFL008W PCL9Q12477 304 aa0.83□□□□□ -2.28
SMC1YFL008W SCS22Q6Q595 175 aa0.83□□□□□ -2.28
SMC1YFL008W ILV1P00927 576 aaKnown RBP0.83□□□□□ -2.28
SMC1YFL008W STE3P06783 470 aa0.83□□□□□ -2.28
SMC1YFL008W YBR121C-AP0C5L4 52 aa0.83□□□□□ -2.28
SMC1YFL008W COQ1P18900 473 aa0.83□□□□□ -2.28
SMC1YFL008W PRE7P23724 241 aaKnown RBP0.83□□□□□ -2.28
SMC1YFL008W MEK1P24719 497 aaPredicted RBP0.83□□□□□ -2.28
SMC1YFL008W YCR090CP25654 182 aaKnown RBP0.83□□□□□ -2.28
SMC1YFL008W MRP17P28778 131 aa0.83□□□□□ -2.28
SMC1YFL008W TRR1P29509 319 aaKnown RBP0.83□□□□□ -2.28
SMC1YFL008W MGM101P32787 269 aaKnown RBP0.83□□□□□ -2.28
SMC1YFL008W COT1P32798 439 aa0.83□□□□□ -2.28
SMC1YFL008W IMP3P32899 183 aaPredicted RBP0.83□□□□□ -2.28
SMC1YFL008W PRP18P33411 251 aaPredicted RBP0.83□□□□□ -2.28
SMC1YFL008W TMA19P35691 167 aaKnown RBP0.83□□□□□ -2.28
SMC1YFL008W YKL071WP36086 256 aa0.83□□□□□ -2.28
SMC1YFL008W RIB1P38066 345 aa0.83□□□□□ -2.28
SMC1YFL008W MRPS9P38120 278 aa0.83□□□□□ -2.28
SMC1YFL008W YBR220CP38318 560 aa0.83□□□□□ -2.28
SMC1YFL008W ECM34P38728 170 aa0.83□□□□□ -2.28
SMC1YFL008W DOG2P38773 246 aa0.83□□□□□ -2.28
SMC1YFL008W YER085CP40058 173 aa0.83□□□□□ -2.28
SMC1YFL008W PEP8P40335 379 aa0.83□□□□□ -2.28
SMC1YFL008W DLS1P40366 167 aa0.83□□□□□ -2.28
SMC1YFL008W OST3P48439 350 aa0.83□□□□□ -2.28
SMC1YFL008W SOL1P50278 321 aa0.83□□□□□ -2.28
SMC1YFL008W NBP35P52920 328 aa0.83□□□□□ -2.28
Retrieved 100 of 5,963 RNA–protein pairs in 57.3 ms