RNA–Protein interactions for RNA: YDR378C

LSM6, Transcript of Lsm (Like Sm) protein, yeastyeast

Gene LSM6, Length 261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSM6YDR378C ADE1P27616 306 aa2.42□□□□□ -2.02
LSM6YDR378C MZM1Q03429 123 aaPredicted RBP2.42□□□□□ -2.02
LSM6YDR378C SPO13P23624 291 aa2.41□□□□□ -2.02
LSM6YDR378C ECM4P36156 370 aa2.41□□□□□ -2.02
LSM6YDR378C TVP38P36164 337 aa2.41□□□□□ -2.02
LSM6YDR378C MPC3P53311 146 aa2.41□□□□□ -2.02
LSM6YDR378C YMR099CQ03161 297 aaKnown RBP2.41□□□□□ -2.02
LSM6YDR378C YOL014WQ08110 124 aa2.41□□□□□ -2.02
LSM6YDR378C YDL085C-AQ3E7B7 68 aaKnown RBP2.41□□□□□ -2.02
LSM6YDR378C TRX3P25372 127 aa2.4□□□□□ -2.03
LSM6YDR378C SHG1P38337 142 aa2.4□□□□□ -2.03
LSM6YDR378C YER034WP40022 185 aaKnown RBP2.4□□□□□ -2.03
LSM6YDR378C YJR111CP47148 283 aaKnown RBP2.4□□□□□ -2.03
LSM6YDR378C UBC12P52491 188 aa2.4□□□□□ -2.03
LSM6YDR378C YMR295CQ03559 197 aa2.4□□□□□ -2.03
LSM6YDR378C NOC4Q06512 552 aaPredicted RBP2.4□□□□□ -2.03
LSM6YDR378C YML100W-AQ8TGT0 57 aa2.4□□□□□ -2.03
LSM6YDR378C YAR023CD6VPM8 179 aa2.39□□□□□ -2.03
LSM6YDR378C VMA22P38784 181 aa2.39□□□□□ -2.03
LSM6YDR378C YHR007C-AQ07074 71 aa2.39□□□□□ -2.03
LSM6YDR378C TMA22P47089 198 aaPredicted RBP2.38□□□□□ -2.03
LSM6YDR378C TDA4P47153 279 aa2.38□□□□□ -2.03
LSM6YDR378C YPR174CQ06616 221 aaPredicted RBP2.38□□□□□ -2.03
LSM6YDR378C CYR1P08678 2026 aaKnown RBP2.37□□□□□ -2.03
LSM6YDR378C ATP7P30902 174 aa2.37□□□□□ -2.03
LSM6YDR378C MTW1P39731 289 aa2.37□□□□□ -2.03
LSM6YDR378C YMR315WQ04869 349 aaKnown RBP2.37□□□□□ -2.03
LSM6YDR378C ATG38Q05789 226 aaKnown RBP2.37□□□□□ -2.03
LSM6YDR378C YET3Q07451 203 aa2.37□□□□□ -2.03
LSM6YDR378C UBR2Q07963 1872 aa2.37□□□□□ -2.03
LSM6YDR378C YPL073CP40323 161 aa2.36□□□□□ -2.03
LSM6YDR378C SHH3Q04487 196 aa2.36□□□□□ -2.03
LSM6YDR378C GRX8Q05926 109 aa2.36□□□□□ -2.03
LSM6YDR378C YPR014CQ6B0W2 109 aa2.36□□□□□ -2.03
LSM6YDR378C NRK1P53915 240 aa2.35□□□□□ -2.03
LSM6YDR378C IRC23Q08416 157 aa2.35□□□□□ -2.03
LSM6YDR378C AIM34Q03673 198 aa2.34□□□□□ -2.03
LSM6YDR378C RPS24AP0CX31 135 aaKnown RBP2.33□□□□□ -2.04
LSM6YDR378C RPS24BP0CX32 135 aaKnown RBP2.33□□□□□ -2.04
LSM6YDR378C NSP1P14907 823 aaKnown RBP2.33□□□□□ -2.04
LSM6YDR378C SNO1Q03144 224 aa2.33□□□□□ -2.04
LSM6YDR378C VPS71Q03433 280 aa2.33□□□□□ -2.04
LSM6YDR378C MGT1P26188 188 aa2.32□□□□□ -2.04
LSM6YDR378C SEC72P39742 193 aaKnown RBP2.32□□□□□ -2.04
LSM6YDR378C CUP9P41817 306 aa2.32□□□□□ -2.04
LSM6YDR378C FMP32P43557 207 aa2.32□□□□□ -2.04
LSM6YDR378C PGA1P53896 198 aa2.32□□□□□ -2.04
LSM6YDR378C YNL146C-AQ3E7Z1 64 aa2.32□□□□□ -2.04
LSM6YDR378C MSB2P32334 1306 aa2.32□□□□□ -2.04
LSM6YDR378C FMP23P38231 175 aa2.31□□□□□ -2.04
LSM6YDR378C YER076CP40049 302 aa2.31□□□□□ -2.04
LSM6YDR378C RIO2P40160 425 aaKnown RBP2.31□□□□□ -2.04
LSM6YDR378C RCE1Q03530 315 aa2.31□□□□□ -2.04
LSM6YDR378C NAT3Q06504 195 aa2.31□□□□□ -2.04
LSM6YDR378C YOR342CQ12182 319 aa2.31□□□□□ -2.04
LSM6YDR378C MDM35O60200 86 aa2.3□□□□□ -2.04
LSM6YDR378C TIR1P10863 254 aa2.3□□□□□ -2.04
LSM6YDR378C AHC2P25649 128 aa2.3□□□□□ -2.04
LSM6YDR378C MPA43P53583 542 aaPredicted RBP2.3□□□□□ -2.04
LSM6YDR378C YPR013CQ12145 317 aa2.3□□□□□ -2.04
LSM6YDR378C MPD1Q12404 318 aaKnown RBP2.3□□□□□ -2.04
LSM6YDR378C DNA2P38859 1522 aa2.3□□□□□ -2.04
LSM6YDR378C GCY1P14065 312 aaKnown RBP RIP-Chip data2.29□□□□□ -2.04not detected
LSM6YDR378C PAM17P36147 197 aa2.29□□□□□ -2.04
LSM6YDR378C FLX1P40464 311 aa2.29□□□□□ -2.04
LSM6YDR378C YFL019CP43576 117 aa2.29□□□□□ -2.04
LSM6YDR378C UBC7Q02159 165 aa2.29□□□□□ -2.04
LSM6YDR378C YMR253CQ04835 414 aa2.29□□□□□ -2.04
LSM6YDR378C SHH4Q06236 168 aa2.29□□□□□ -2.04
LSM6YDR378C PRP11Q07350 266 aaPredicted RBP2.29□□□□□ -2.04
LSM6YDR378C NSG1P38837 291 aa2.28□□□□□ -2.04
LSM6YDR378C SPC25P40014 221 aa2.28□□□□□ -2.04
LSM6YDR378C DAD4P69851 72 aa2.28□□□□□ -2.04
LSM6YDR378C BRX1Q08235 291 aaKnown RBP2.28□□□□□ -2.04
LSM6YDR378C EDC3P39998 551 aaKnown RBP2.27□□□□□ -2.05
LSM6YDR378C POG1P40473 351 aa2.27□□□□□ -2.05
LSM6YDR378C YLR412C-AQ3E742 68 aa2.27□□□□□ -2.05
LSM6YDR378C FAS1P07149 2051 aaKnown RBP2.26□□□□□ -2.05
LSM6YDR378C IDP1P21954 428 aaKnown RBP2.26□□□□□ -2.05
LSM6YDR378C SEC14P24280 304 aaKnown RBP2.26□□□□□ -2.05
LSM6YDR378C TRR1P29509 319 aaKnown RBP2.26□□□□□ -2.05
LSM6YDR378C YHL018WP38744 120 aaPredicted RBP2.26□□□□□ -2.05
LSM6YDR378C GPI14P47088 403 aaKnown RBP2.26□□□□□ -2.05
LSM6YDR378C YNL033WP53964 284 aa2.26□□□□□ -2.05
LSM6YDR378C RNH202Q05635 350 aa2.26□□□□□ -2.05
LSM6YDR378C MON2P48563 1636 aaPredicted RBP2.26□□□□□ -2.05
LSM6YDR378C PHO85P17157 305 aa2.25□□□□□ -2.05
LSM6YDR378C SFK1P35735 353 aa2.25□□□□□ -2.05
LSM6YDR378C YKR041WP36134 250 aa2.25□□□□□ -2.05
LSM6YDR378C EGD2P38879 174 aaKnown RBP2.25□□□□□ -2.05
LSM6YDR378C YAE1P47118 141 aaPredicted RBP2.25□□□□□ -2.05
LSM6YDR378C CWC27Q02770 301 aa2.25□□□□□ -2.05
LSM6YDR378C DIG2Q03373 323 aaKnown RBP2.25□□□□□ -2.05
LSM6YDR378C SAC3P46674 1301 aa2.24□□□□□ -2.05
LSM6YDR378C COX8P04039 78 aa2.24□□□□□ -2.05
LSM6YDR378C YKL102CP34249 101 aa2.24□□□□□ -2.05
LSM6YDR378C NSA2P40078 261 aaKnown RBP2.24□□□□□ -2.05
LSM6YDR378C HYR1P40581 163 aaKnown RBP2.24□□□□□ -2.05
LSM6YDR378C YNL247WP53852 767 aaKnown RBP2.24□□□□□ -2.05
LSM6YDR378C GPI17Q04080 534 aa2.24□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 15.9 ms