RNA–Protein interactions for RNA: YDR354W

TRP4, Transcript of Anthranilate phosphoribosyl transferase, yeast

Gene TRP4, Length 1,143 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRP4	YDR354W	YLR361C-A	Q3E795	98 aa		3.18	□□□□□ -1.9
TRP4	YDR354W	YOL085C	Q99345	113 aa		3.18	□□□□□ -1.9
TRP4	YDR354W	KIN28	P06242	306 aa		3.17	□□□□□ -1.9
TRP4	YDR354W	RPS14A	P06367	137 aa	Known RBP	3.17	□□□□□ -1.9
TRP4	YDR354W	MET2	P08465	486 aa		3.17	□□□□□ -1.9
TRP4	YDR354W	EPT1	P22140	391 aa		3.17	□□□□□ -1.9
TRP4	YDR354W	TRX3	P25372	127 aa		3.17	□□□□□ -1.9
TRP4	YDR354W	SPS18	P32572	300 aa		3.17	□□□□□ -1.9
TRP4	YDR354W	MRPL28	P36527	147 aa		3.17	□□□□□ -1.9
TRP4	YDR354W	MBA1	P38300	278 aa		3.17	□□□□□ -1.9
TRP4	YDR354W	ECM34	P38728	170 aa		3.17	□□□□□ -1.9
TRP4	YDR354W	RPS14B	P39516	138 aa	Known RBP	3.17	□□□□□ -1.9
TRP4	YDR354W	GDS1	P41913	522 aa		3.17	□□□□□ -1.9
TRP4	YDR354W	YCH1	P42937	148 aa		3.17	□□□□□ -1.9
TRP4	YDR354W	OST3	P48439	350 aa		3.17	□□□□□ -1.9
TRP4	YDR354W	NBP35	P52920	328 aa		3.17	□□□□□ -1.9
TRP4	YDR354W	PDR17	P53844	350 aa		3.17	□□□□□ -1.9
TRP4	YDR354W	MRX11	Q03079	207 aa		3.17	□□□□□ -1.9
TRP4	YDR354W	MET31	Q03081	177 aa		3.17	□□□□□ -1.9
TRP4	YDR354W	PKR1	Q03880	122 aa	Known RBP	3.17	□□□□□ -1.9
TRP4	YDR354W	YPR098C	Q06089	161 aa		3.17	□□□□□ -1.9
TRP4	YDR354W	YLR446W	Q06204	433 aa		3.17	□□□□□ -1.9
TRP4	YDR354W	RFM1	Q12192	310 aa		3.17	□□□□□ -1.9
TRP4	YDR354W	AGC1	Q12482	902 aa		3.17	□□□□□ -1.9
TRP4	YDR354W	MHT1	Q12525	324 aa		3.17	□□□□□ -1.9
TRP4	YDR354W	DET1	Q99288	334 aa	Known RBP	3.17	□□□□□ -1.9
TRP4	YDR354W	CDC39	P25655	2108 aa	Known RBP	3.16	□□□□□ -1.9
TRP4	YDR354W	YPR096C	O13587	100 aa		3.16	□□□□□ -1.9
TRP4	YDR354W	CDC28	P00546	298 aa	Known RBP	3.16	□□□□□ -1.9
TRP4	YDR354W	HAP2	P06774	265 aa		3.16	□□□□□ -1.9
TRP4	YDR354W	INO2	P26798	304 aa		3.16	□□□□□ -1.9
TRP4	YDR354W	CAT2	P32796	670 aa	Known RBP	3.16	□□□□□ -1.9
TRP4	YDR354W	SPT4	P32914	102 aa	Predicted RBP	3.16	□□□□□ -1.9
TRP4	YDR354W	LHP1	P33399	275 aa	Known RBP	3.16	□□□□□ -1.9
TRP4	YDR354W	PRY2	P36110	329 aa		3.16	□□□□□ -1.9
TRP4	YDR354W	YER076C	P40049	302 aa		3.16	□□□□□ -1.9
TRP4	YDR354W	COQ5	P49017	307 aa		3.16	□□□□□ -1.9
TRP4	YDR354W	TRM9	P49957	279 aa		3.16	□□□□□ -1.9
TRP4	YDR354W	YGR015C	P53208	328 aa		3.16	□□□□□ -1.9
TRP4	YDR354W	RHO3	Q00245	231 aa	Known RBP	3.16	□□□□□ -1.9
TRP4	YDR354W	PIR1	Q03178	341 aa		3.16	□□□□□ -1.9
TRP4	YDR354W	YMR279C	Q03263	540 aa		3.16	□□□□□ -1.9
TRP4	YDR354W	YMR315W	Q04869	349 aa	Known RBP	3.16	□□□□□ -1.9
TRP4	YDR354W	YLR030W	Q07967	263 aa		3.16	□□□□□ -1.9
TRP4	YDR354W	YOR283W	Q12040	230 aa	Known RBP	3.16	□□□□□ -1.9
TRP4	YDR354W	MDM32	Q12171	622 aa		3.16	□□□□□ -1.9
TRP4	YDR354W	RTR2	Q12378	196 aa		3.16	□□□□□ -1.9
TRP4	YDR354W	TFC7	Q12415	435 aa		3.16	□□□□□ -1.9
TRP4	YDR354W	CTA1	P15202	515 aa		3.15	□□□□□ -1.91
TRP4	YDR354W	IFM1	P25038	676 aa		3.15	□□□□□ -1.91
TRP4	YDR354W	OAC1	P32332	324 aa		3.15	□□□□□ -1.91
TRP4	YDR354W	RNP1	P32385	249 aa		3.15	□□□□□ -1.91
TRP4	YDR354W	MRPL3	P36516	390 aa		3.15	□□□□□ -1.91
TRP4	YDR354W	SHE1	P38200	338 aa		3.15	□□□□□ -1.91
TRP4	YDR354W	ECM33	P38248	429 aa	Known RBP	3.15	□□□□□ -1.91
TRP4	YDR354W	YHR127W	P38833	243 aa	Known RBP	3.15	□□□□□ -1.91
TRP4	YDR354W	NVJ1	P38881	321 aa		3.15	□□□□□ -1.91
TRP4	YDR354W	YEL073C	P39974	107 aa		3.15	□□□□□ -1.91
TRP4	YDR354W	RRT13	P40042	185 aa		3.15	□□□□□ -1.91
TRP4	YDR354W	SYF2	P53277	215 aa	Predicted RBP	3.15	□□□□□ -1.91
TRP4	YDR354W	ERV29	P53337	310 aa		3.15	□□□□□ -1.91
TRP4	YDR354W	MPA43	P53583	542 aa	Predicted RBP	3.15	□□□□□ -1.91
TRP4	YDR354W	GAS2	Q06135	555 aa		3.15	□□□□□ -1.91
TRP4	YDR354W	MMT2	Q08970	484 aa		3.15	□□□□□ -1.91
TRP4	YDR354W	USB1	Q12208	290 aa	Known RBP	3.15	□□□□□ -1.91
TRP4	YDR354W	YOR214C	Q12282	236 aa		3.15	□□□□□ -1.91
TRP4	YDR354W	PEX11	Q12462	236 aa		3.15	□□□□□ -1.91
TRP4	YDR354W	WIP1	Q2V2P8	89 aa		3.15	□□□□□ -1.91
TRP4	YDR354W	SLO1	Q3E784	85 aa		3.15	□□□□□ -1.91
TRP4	YDR354W	YDL085C-A	Q3E7B7	68 aa	Known RBP	3.15	□□□□□ -1.91
TRP4	YDR354W	SUS1	Q6WNK7	96 aa		3.15	□□□□□ -1.91
TRP4	YDR354W	YEL009C-A	A0A023PZF2	135 aa		3.14	□□□□□ -1.91
TRP4	YDR354W	MIR1	P23641	311 aa	Known RBP	3.14	□□□□□ -1.91
TRP4	YDR354W	SUA7	P29055	345 aa	Predicted RBP	3.14	□□□□□ -1.91
TRP4	YDR354W	HYM1	P32464	399 aa		3.14	□□□□□ -1.91
TRP4	YDR354W	YMR144W	P40214	342 aa	Known RBP	3.14	□□□□□ -1.91
TRP4	YDR354W	TIR3	P40552	269 aa		3.14	□□□□□ -1.91
TRP4	YDR354W	PAM16	P42949	149 aa		3.14	□□□□□ -1.91
TRP4	YDR354W	YAE1	P47118	141 aa	Predicted RBP	3.14	□□□□□ -1.91
TRP4	YDR354W	MCM22	P47167	239 aa		3.14	□□□□□ -1.91
TRP4	YDR354W	UBC13	P52490	153 aa		3.14	□□□□□ -1.91
TRP4	YDR354W	LSM7	P53905	115 aa	Known RBP	3.14	□□□□□ -1.91
TRP4	YDR354W	DID2	P69771	204 aa		3.14	□□□□□ -1.91
TRP4	YDR354W	ARL3	Q02804	198 aa		3.14	□□□□□ -1.91
TRP4	YDR354W	ELP6	Q04868	273 aa		3.14	□□□□□ -1.91
TRP4	YDR354W	FRQ1	Q06389	190 aa		3.14	□□□□□ -1.91
TRP4	YDR354W	MRX9	Q07349	420 aa	Known RBP	3.14	□□□□□ -1.91
TRP4	YDR354W	YLR012C	Q07927	99 aa		3.14	□□□□□ -1.91
TRP4	YDR354W	YOL024W	Q08172	172 aa		3.14	□□□□□ -1.91
TRP4	YDR354W	YLR046C	Q12253	270 aa		3.14	□□□□□ -1.91
TRP4	YDR354W	MRX4	Q12467	430 aa		3.14	□□□□□ -1.91
TRP4	YDR354W	IGO2	Q9P305	131 aa		3.14	□□□□□ -1.91
TRP4	YDR354W	SEC16	P48415	2195 aa	Known RBP	3.13	□□□□□ -1.91
TRP4	YDR354W	SIR2	P06700	562 aa		3.13	□□□□□ -1.91
TRP4	YDR354W	YOL163W	P0CF20	169 aa		3.13	□□□□□ -1.91
TRP4	YDR354W	PBI2	P0CT04	75 aa	Known RBP	3.13	□□□□□ -1.91
TRP4	YDR354W	PHO80	P20052	293 aa		3.13	□□□□□ -1.91
TRP4	YDR354W	CKS1	P20486	150 aa	Known RBP	3.13	□□□□□ -1.91
TRP4	YDR354W	ALK2	P32789	676 aa	Predicted RBP	3.13	□□□□□ -1.91
TRP4	YDR354W	YKL075C	P36083	450 aa		3.13	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 40.8 ms