RNA–Protein interactions for RNA: YDL224C

WHI4, Transcript of Putative RNA binding protein, yeast

Gene WHI4, Length 1,950 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
WHI4	YDL224C	ATP7	P30902	174 aa		3.2	□□□□□ -1.9
WHI4	YDL224C	ICE2	P40499	491 aa		3.2	□□□□□ -1.9
WHI4	YDL224C	ARO80	Q04052	950 aa		3.2	□□□□□ -1.9
WHI4	YDL224C	YHR086W-A	Q3E746	53 aa		3.2	□□□□□ -1.9
WHI4	YDL224C	HYR1	P40581	163 aa	Known RBP	3.19	□□□□□ -1.9
WHI4	YDL224C	ERG10	P41338	398 aa	Known RBP	3.19	□□□□□ -1.9
WHI4	YDL224C	ATP15	P21306	62 aa		3.18	□□□□□ -1.9
WHI4	YDL224C	CNB1	P25296	175 aa		3.18	□□□□□ -1.9
WHI4	YDL224C	YAP3	P38749	330 aa		3.18	□□□□□ -1.9
WHI4	YDL224C	RIO2	P40160	425 aa	Known RBP	3.18	□□□□□ -1.9
WHI4	YDL224C	GVP36	P40531	326 aa	Known RBP	3.18	□□□□□ -1.9
WHI4	YDL224C	TIR3	P40552	269 aa		3.18	□□□□□ -1.9
WHI4	YDL224C	DOC1	P53068	250 aa		3.18	□□□□□ -1.9
WHI4	YDL224C	TLG1	Q03322	224 aa		3.18	□□□□□ -1.9
WHI4	YDL224C	IGO2	Q9P305	131 aa		3.18	□□□□□ -1.9
WHI4	YDL224C	TY1B-H	O13535	1793 aa		3.18	□□□□□ -1.9
WHI4	YDL224C	TY1B-DR5	P0C2I2	1755 aa		3.18	□□□□□ -1.9
WHI4	YDL224C	TY1B-DR6	P0C2I3	1755 aa		3.18	□□□□□ -1.9
WHI4	YDL224C	TY1B-LR2	P0C2I5	1755 aa		3.18	□□□□□ -1.9
WHI4	YDL224C	TY1B-LR3	P0C2I6	1755 aa	Known RBP	3.18	□□□□□ -1.9
WHI4	YDL224C	TY1B-PR1	P0C2I9	1755 aa	Known RBP	3.18	□□□□□ -1.9
WHI4	YDL224C	TY1B-PR2	P0C2J0	1756 aa		3.18	□□□□□ -1.9
WHI4	YDL224C	TY1B-PR3	P0C2J1	1755 aa	Known RBP	3.18	□□□□□ -1.9
WHI4	YDL224C	TY1B-JR1	P47098	1755 aa		3.18	□□□□□ -1.9
WHI4	YDL224C	TY1B-ML2	Q03434	1755 aa	Known RBP	3.18	□□□□□ -1.9
WHI4	YDL224C	TY1B-ER1	Q03612	1755 aa		3.18	□□□□□ -1.9
WHI4	YDL224C	TY1B-ML1	Q04711	1755 aa	Known RBP	3.18	□□□□□ -1.9
WHI4	YDL224C	TY1B-GR2	Q12269	1755 aa		3.18	□□□□□ -1.9
WHI4	YDL224C	TY1B-OL	Q12273	1755 aa		3.18	□□□□□ -1.9
WHI4	YDL224C	TY1B-PL	Q12414	1755 aa	Known RBP	3.18	□□□□□ -1.9
WHI4	YDL224C	UMP1	P38293	148 aa		3.18	□□□□□ -1.9
WHI4	YDL224C	YHR022C	P38763	256 aa		3.18	□□□□□ -1.9
WHI4	YDL224C	LYS2	P07702	1392 aa		3.17	□□□□□ -1.9
WHI4	YDL224C	BOL2	P53082	120 aa		3.17	□□□□□ -1.9
WHI4	YDL224C	CYT2	Q00873	224 aa		3.17	□□□□□ -1.9
WHI4	YDL224C	SPO14	P36126	1683 aa		3.17	□□□□□ -1.9
WHI4	YDL224C	GLE2	P40066	365 aa		3.16	□□□□□ -1.9
WHI4	YDL224C	YNR077C	P53758	84 aa		3.16	□□□□□ -1.9
WHI4	YDL224C	YDR274C	P87283	123 aa		3.16	□□□□□ -1.9
WHI4	YDL224C	GRE1	Q08969	168 aa		3.16	□□□□□ -1.9
WHI4	YDL224C	YOR093C	Q12275	1648 aa		3.16	□□□□□ -1.9
WHI4	YDL224C	TY1B-JR2	P47100	1755 aa	Known RBP	3.16	□□□□□ -1.9
WHI4	YDL224C	TY1B-ER2	Q03619	1755 aa		3.16	□□□□□ -1.9
WHI4	YDL224C	TY1B-MR1	Q04214	1755 aa		3.16	□□□□□ -1.9
WHI4	YDL224C	TY1B-MR2	Q04670	1755 aa	Known RBP	3.16	□□□□□ -1.9
WHI4	YDL224C	TY1B-LR1	Q12088	1755 aa	Known RBP	3.16	□□□□□ -1.9
WHI4	YDL224C	TY1B-NL1	Q12112	1755 aa		3.16	□□□□□ -1.9
WHI4	YDL224C	TY1B-GR1	Q12141	1755 aa		3.16	□□□□□ -1.9
WHI4	YDL224C	TY1B-BL	Q12490	1755 aa		3.16	□□□□□ -1.9
WHI4	YDL224C	DDI2	P0CH63	225 aa		3.16	□□□□□ -1.9
WHI4	YDL224C	DDI3	P0CH64	225 aa		3.16	□□□□□ -1.9
WHI4	YDL224C	YNL184C	P53876	108 aa		3.16	□□□□□ -1.9
WHI4	YDL224C	NOC4	Q06512	552 aa	Predicted RBP	3.16	□□□□□ -1.9
WHI4	YDL224C	YSP2	Q06681	1438 aa		3.15	□□□□□ -1.9
WHI4	YDL224C	MBF1	O14467	151 aa	Known RBP	3.15	□□□□□ -1.91
WHI4	YDL224C	EAF6	P47128	113 aa		3.15	□□□□□ -1.91
WHI4	YDL224C	UBC12	P52491	188 aa		3.15	□□□□□ -1.91
WHI4	YDL224C	ERG25	P53045	309 aa		3.15	□□□□□ -1.91
WHI4	YDL224C	TY1B-BR	Q12193	1756 aa		3.15	□□□□□ -1.91
WHI4	YDL224C	TY1B-GR3	Q12316	1755 aa		3.15	□□□□□ -1.91
WHI4	YDL224C	TY1B-OR	Q92393	1755 aa		3.15	□□□□□ -1.91
WHI4	YDL224C	DUR1,2	P32528	1835 aa	Known RBP	3.15	□□□□□ -1.91
WHI4	YDL224C	NUP192	P47054	1683 aa		3.14	□□□□□ -1.91
WHI4	YDL224C	CKS1	P20486	150 aa	Known RBP	3.14	□□□□□ -1.91
WHI4	YDL224C	CAF4	P36130	643 aa		3.14	□□□□□ -1.91
WHI4	YDL224C	PDS1	P40316	373 aa	Predicted RBP	3.14	□□□□□ -1.91
WHI4	YDL224C	RTC4	P53850	401 aa		3.14	□□□□□ -1.91
WHI4	YDL224C	YOL024W	Q08172	172 aa		3.14	□□□□□ -1.91
WHI4	YDL224C	PDR18	P53756	1333 aa		3.14	□□□□□ -1.91
WHI4	YDL224C	IML1	P47170	1584 aa		3.14	□□□□□ -1.91
WHI4	YDL224C	RPO21	P04050	1733 aa	Known RBP	3.14	□□□□□ -1.91
WHI4	YDL224C	SNC2	P33328	115 aa		3.14	□□□□□ -1.91
WHI4	YDL224C	YET1	P35723	206 aa		3.14	□□□□□ -1.91
WHI4	YDL224C	ARP3	P47117	449 aa	Known RBP	3.14	□□□□□ -1.91
WHI4	YDL224C	HNT1	Q04344	158 aa	Known RBP	3.14	□□□□□ -1.91
WHI4	YDL224C	ECM4	P36156	370 aa		3.13	□□□□□ -1.91
WHI4	YDL224C	SNO1	Q03144	224 aa		3.13	□□□□□ -1.91
WHI4	YDL224C	DDP1	Q99321	188 aa	Known RBP	3.13	□□□□□ -1.91
WHI4	YDL224C	RPO41	P13433	1351 aa	Known RBP	3.12	□□□□□ -1.91
WHI4	YDL224C	TAH1	P25638	111 aa	Predicted RBP	3.12	□□□□□ -1.91
WHI4	YDL224C	SVP26	P38869	228 aa		3.12	□□□□□ -1.91
WHI4	YDL224C	SEC72	P39742	193 aa	Known RBP	3.12	□□□□□ -1.91
WHI4	YDL224C	AGE2	P40529	298 aa		3.12	□□□□□ -1.91
WHI4	YDL224C	FUS2	Q05670	677 aa		3.12	□□□□□ -1.91
WHI4	YDL224C	RIO1	Q12196	484 aa	Known RBP	3.12	□□□□□ -1.91
WHI4	YDL224C	SHG1	P38337	142 aa		3.12	□□□□□ -1.91
WHI4	YDL224C	NRK1	P53915	240 aa		3.12	□□□□□ -1.91
WHI4	YDL224C	RME1	P32338	300 aa	Known RBP	3.11	□□□□□ -1.91
WHI4	YDL224C	YNL217W	P40152	326 aa		3.11	□□□□□ -1.91
WHI4	YDL224C	GRX8	Q05926	109 aa		3.11	□□□□□ -1.91
WHI4	YDL224C	FSF1	Q12029	327 aa	Known RBP	3.11	□□□□□ -1.91
WHI4	YDL224C	VMR1	P38735	1592 aa		3.11	□□□□□ -1.91
WHI4	YDL224C	CPA1	P07258	411 aa	Known RBP	3.11	□□□□□ -1.91
WHI4	YDL224C	OCH1	P31755	480 aa		3.11	□□□□□ -1.91
WHI4	YDL224C	YBR285W	P38354	144 aa		3.11	□□□□□ -1.91
WHI4	YDL224C	BOL1	Q3E793	110 aa		3.11	□□□□□ -1.91
WHI4	YDL224C	TRX3	P25372	127 aa		3.1	□□□□□ -1.91
WHI4	YDL224C	DSE2	P38844	325 aa		3.1	□□□□□ -1.91
WHI4	YDL224C	AYR1	P40471	297 aa		3.1	□□□□□ -1.91
WHI4	YDL224C	POG1	P40473	351 aa		3.09	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 42.6 ms