RNA–Protein interactions for RNA: YDL088C

ASM4, Transcript of FG-nucleoporin component of central core of nuclear pore complex (NPC), yeastyeast

Gene ASM4, Length 1,587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ASM4YDL088C OPY1P38271 328 aa1.2□□□□□ -2.22
ASM4YDL088C YBR285WP38354 144 aa1.2□□□□□ -2.22
ASM4YDL088C RFC2P40348 353 aa1.2□□□□□ -2.22
ASM4YDL088C PGD1P40356 397 aa1.2□□□□□ -2.22
ASM4YDL088C SER2P42941 309 aa1.2□□□□□ -2.22
ASM4YDL088C PRM10P42946 383 aa1.2□□□□□ -2.22
ASM4YDL088C MPA43P53583 542 aaPredicted RBP1.2□□□□□ -2.22
ASM4YDL088C NEJ1Q06148 342 aa1.2□□□□□ -2.22
ASM4YDL088C YDL180WQ12301 547 aa1.2□□□□□ -2.22
ASM4YDL088C YFR032C-BQ8TGU2 87 aa1.2□□□□□ -2.22
ASM4YDL088C YHR032W-AP0C5N6 59 aa1.19□□□□□ -2.22
ASM4YDL088C ATP15P21306 62 aa1.19□□□□□ -2.22
ASM4YDL088C MDH3P32419 343 aaKnown RBP RIP-Chip data1.19□□□□□ -2.22not detected
ASM4YDL088C PAN3P36102 679 aaPredicted RBP1.19□□□□□ -2.22
ASM4YDL088C AVT2P39981 480 aa1.19□□□□□ -2.22
ASM4YDL088C GVP36P40531 326 aaKnown RBP1.19□□□□□ -2.22
ASM4YDL088C YGL235WP53071 178 aa1.19□□□□□ -2.22
ASM4YDL088C NQM1P53228 333 aaPredicted RBP1.19□□□□□ -2.22
ASM4YDL088C DAD3P69850 94 aa1.19□□□□□ -2.22
ASM4YDL088C HSK3P69852 69 aa1.19□□□□□ -2.22
ASM4YDL088C YDC1Q02896 317 aa1.19□□□□□ -2.22
ASM4YDL088C YDR476CQ03362 224 aa1.19□□□□□ -2.22
ASM4YDL088C PKR1Q03880 122 aaKnown RBP1.19□□□□□ -2.22
ASM4YDL088C YPR127WQ06494 345 aa1.19□□□□□ -2.22
ASM4YDL088C YOR342CQ12182 319 aa1.19□□□□□ -2.22
ASM4YDL088C YAR023CD6VPM8 179 aa1.18□□□□□ -2.22
ASM4YDL088C TIM9O74700 87 aa1.18□□□□□ -2.22
ASM4YDL088C RPS28BP0C0X0 67 aaKnown RBP1.18□□□□□ -2.22
ASM4YDL088C PBI2P0CT04 75 aaKnown RBP1.18□□□□□ -2.22
ASM4YDL088C BUB2P26448 306 aaPredicted RBP1.18□□□□□ -2.22
ASM4YDL088C KDX1P36005 433 aa1.18□□□□□ -2.22
ASM4YDL088C POP7P38291 140 aa1.18□□□□□ -2.22
ASM4YDL088C SLM6P38343 150 aa1.18□□□□□ -2.22
ASM4YDL088C YEA4P40004 342 aa1.18□□□□□ -2.22
ASM4YDL088C YJL027CP47063 138 aaPredicted RBP1.18□□□□□ -2.22
ASM4YDL088C YJR111CP47148 283 aaKnown RBP1.18□□□□□ -2.22
ASM4YDL088C TTI2P47168 421 aa1.18□□□□□ -2.22
ASM4YDL088C SPG3Q04398 127 aaPredicted RBP1.18□□□□□ -2.22
ASM4YDL088C YPD1Q07688 167 aa1.18□□□□□ -2.22
ASM4YDL088C FSF1Q12029 327 aaKnown RBP1.18□□□□□ -2.22
ASM4YDL088C YLR046CQ12253 270 aa1.18□□□□□ -2.22
ASM4YDL088C DGK1Q12382 290 aa1.18□□□□□ -2.22
ASM4YDL088C RPS28AQ3E7X9 67 aaPredicted RBP1.18□□□□□ -2.22
ASM4YDL088C PDR18P53756 1333 aa1.18□□□□□ -2.22
ASM4YDL088C YOR1P53049 1477 aa1.18□□□□□ -2.22
ASM4YDL088C YIL177CP40434 1758 aa1.17□□□□□ -2.22
ASM4YDL088C YJL225CP40889 1758 aa1.17□□□□□ -2.22
ASM4YDL088C UBI4P0CG63 381 aaKnown RBP1.17□□□□□ -2.22
ASM4YDL088C RPC19P28000 142 aaKnown RBP1.17□□□□□ -2.22
ASM4YDL088C UBC8P28263 218 aa1.17□□□□□ -2.22
ASM4YDL088C YET1P35723 206 aa1.17□□□□□ -2.22
ASM4YDL088C SOK1P40317 901 aa1.17□□□□□ -2.22
ASM4YDL088C YFL019CP43576 117 aa1.17□□□□□ -2.22
ASM4YDL088C GPI14P47088 403 aaKnown RBP1.17□□□□□ -2.22
ASM4YDL088C DOC1P53068 250 aa1.17□□□□□ -2.22
ASM4YDL088C LSM3P57743 89 aaKnown RBP1.17□□□□□ -2.22
ASM4YDL088C SPC2Q04969 178 aa1.17□□□□□ -2.22
ASM4YDL088C EMC6Q12431 108 aa1.17□□□□□ -2.22
ASM4YDL088C YML100W-AQ8TGT0 57 aa1.17□□□□□ -2.22
ASM4YDL088C PET54P10834 293 aa1.17□□□□□ -2.22
ASM4YDL088C IDP1P21954 428 aaKnown RBP1.17□□□□□ -2.22
ASM4YDL088C PEX4P29340 183 aa1.17□□□□□ -2.22
ASM4YDL088C YAP3P38749 330 aa1.17□□□□□ -2.22
ASM4YDL088C IPI1P38803 334 aaPredicted RBP1.17□□□□□ -2.22
ASM4YDL088C YHR180WP38868 163 aa1.17□□□□□ -2.22
ASM4YDL088C SVP26P38869 228 aa1.17□□□□□ -2.22
ASM4YDL088C GIM4P40005 111 aaKnown RBP1.17□□□□□ -2.22
ASM4YDL088C FCY21P40039 528 aa1.17□□□□□ -2.22
ASM4YDL088C VTC1P40046 129 aaRIP-Chip data1.17□□□□□ -2.22not detected
ASM4YDL088C DLS1P40366 167 aa1.17□□□□□ -2.22
ASM4YDL088C APQ12P40532 138 aa1.17□□□□□ -2.22
ASM4YDL088C RPL33BP41056 107 aaKnown RBP1.17□□□□□ -2.22
ASM4YDL088C GLR1P41921 483 aaKnown RBP1.17□□□□□ -2.22
ASM4YDL088C RBL2P48606 106 aaKnown RBP1.17□□□□□ -2.22
ASM4YDL088C YGL101WP53144 215 aa1.17□□□□□ -2.22
ASM4YDL088C YGR042WP53227 271 aa1.17□□□□□ -2.22
ASM4YDL088C TIM13P53299 105 aa1.17□□□□□ -2.22
ASM4YDL088C YGR219WP53307 113 aa1.17□□□□□ -2.22
ASM4YDL088C YDR274CP87283 123 aa1.17□□□□□ -2.22
ASM4YDL088C MRPS8Q03799 155 aa1.17□□□□□ -2.22
ASM4YDL088C NAT3Q06504 195 aa1.17□□□□□ -2.22
ASM4YDL088C MEU1Q07938 337 aaKnown RBP RIP-Chip data1.17□□□□□ -2.22not detected
ASM4YDL088C RAS2P01120 322 aaKnown RBP1.16□□□□□ -2.22
ASM4YDL088C PHO85P17157 305 aa1.16□□□□□ -2.22
ASM4YDL088C YCR023CP25351 611 aa1.16□□□□□ -2.22
ASM4YDL088C STP22P25604 385 aa1.16□□□□□ -2.22
ASM4YDL088C UPS2P35200 230 aa1.16□□□□□ -2.22
ASM4YDL088C YNL200CP40165 246 aaKnown RBP1.16□□□□□ -2.22
ASM4YDL088C TIR3P40552 269 aa1.16□□□□□ -2.22
ASM4YDL088C CIS3P47001 227 aa1.16□□□□□ -2.22
ASM4YDL088C VPS71Q03433 280 aa1.16□□□□□ -2.22
ASM4YDL088C YMR295CQ03559 197 aa1.16□□□□□ -2.22
ASM4YDL088C RAV2Q03956 351 aa1.16□□□□□ -2.22
ASM4YDL088C YOL014WQ08110 124 aa1.16□□□□□ -2.22
ASM4YDL088C DAS2Q12084 232 aa1.16□□□□□ -2.22
ASM4YDL088C YOR214CQ12282 236 aa1.16□□□□□ -2.22
ASM4YDL088C ATG40Q99325 256 aa1.16□□□□□ -2.22
ASM4YDL088C RPL30P14120 105 aaKnown RBP1.15□□□□□ -2.23
ASM4YDL088C YOR062CP36025 268 aa1.15□□□□□ -2.23
ASM4YDL088C PHO88P38264 188 aaPredicted RBP1.15□□□□□ -2.23
Retrieved 100 of 5,963 RNA–protein pairs in 15.2 ms