RNA–Protein interactions for RNA: YDL020C

RPN4, Transcript of Transcription factor that stimulates expression of proteasome genes, yeastyeast

Gene RPN4, Length 1,596 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN4YDL020C YNL247WP53852 767 aaKnown RBP2.37□□□□□ -2.03
RPN4YDL020C TIM8P57744 87 aa2.37□□□□□ -2.03
RPN4YDL020C YPR202WQ08993 238 aa2.37□□□□□ -2.03
RPN4YDL020C ATO3Q12359 275 aa2.37□□□□□ -2.03
RPN4YDL020C PMD1P32634 1753 aa2.37□□□□□ -2.03
RPN4YDL020C MSW1P04803 379 aa2.36□□□□□ -2.03
RPN4YDL020C BUD23P25627 275 aaPredicted RBP2.36□□□□□ -2.03
RPN4YDL020C TFC1P32367 649 aa2.36□□□□□ -2.03
RPN4YDL020C ETR1P38071 380 aa2.36□□□□□ -2.03
RPN4YDL020C FMP32P43557 207 aa2.36□□□□□ -2.03
RPN4YDL020C FAR7P43592 221 aa2.36□□□□□ -2.03
RPN4YDL020C PRM8P53174 237 aa2.36□□□□□ -2.03
RPN4YDL020C LPP1Q04396 274 aa2.36□□□□□ -2.03
RPN4YDL020C ADF1Q2V2Q1 113 aa2.36□□□□□ -2.03
RPN4YDL020C IDH1P28834 360 aaKnown RBP RIP-Chip data2.36□□□□□ -2.03not detected
RPN4YDL020C APS1P35181 156 aa2.36□□□□□ -2.03
RPN4YDL020C TAF14P35189 244 aa2.36□□□□□ -2.03
RPN4YDL020C YER034WP40022 185 aaKnown RBP2.36□□□□□ -2.03
RPN4YDL020C IRC18P47056 224 aa2.36□□□□□ -2.03
RPN4YDL020C YNL010WP53981 241 aaKnown RBP2.36□□□□□ -2.03
RPN4YDL020C ARR2Q06597 130 aa2.36□□□□□ -2.03
RPN4YDL020C YET3Q07451 203 aa2.36□□□□□ -2.03
RPN4YDL020C PDX3P38075 228 aaKnown RBP2.35□□□□□ -2.03
RPN4YDL020C PDR17P53844 350 aa2.35□□□□□ -2.03
RPN4YDL020C ATG38Q05789 226 aaKnown RBP2.35□□□□□ -2.03
RPN4YDL020C NEJ1Q06148 342 aa2.35□□□□□ -2.03
RPN4YDL020C PSF1Q12488 208 aa2.35□□□□□ -2.03
RPN4YDL020C GPA2P10823 449 aa2.34□□□□□ -2.03
RPN4YDL020C GCN3P14741 305 aa2.34□□□□□ -2.03
RPN4YDL020C MER1P16523 270 aa2.34□□□□□ -2.03
RPN4YDL020C ATG22P25568 528 aa2.34□□□□□ -2.03
RPN4YDL020C MDH3P32419 343 aaKnown RBP RIP-Chip data2.34□□□□□ -2.03not detected
RPN4YDL020C YBR285WP38354 144 aa2.34□□□□□ -2.03
RPN4YDL020C IKI1P38874 309 aa2.34□□□□□ -2.03
RPN4YDL020C PEP8P40335 379 aa2.34□□□□□ -2.03
RPN4YDL020C YJL027CP47063 138 aaPredicted RBP2.34□□□□□ -2.03
RPN4YDL020C CGR1P53188 120 aa2.34□□□□□ -2.03
RPN4YDL020C YGR219WP53307 113 aa2.34□□□□□ -2.03
RPN4YDL020C SWP1Q02795 286 aa2.34□□□□□ -2.03
RPN4YDL020C SNZ1Q03148 297 aa2.34□□□□□ -2.03
RPN4YDL020C MRPS8Q03799 155 aa2.34□□□□□ -2.03
RPN4YDL020C PLP1Q04004 230 aa2.34□□□□□ -2.03
RPN4YDL020C GPI17Q04080 534 aa2.34□□□□□ -2.03
RPN4YDL020C SPC2Q04969 178 aa2.34□□□□□ -2.03
RPN4YDL020C UIP4Q08926 304 aa2.34□□□□□ -2.03
RPN4YDL020C YOR342CQ12182 319 aa2.34□□□□□ -2.03
RPN4YDL020C SNF4P12904 322 aa2.33□□□□□ -2.04
RPN4YDL020C KSS1P14681 368 aa2.33□□□□□ -2.04
RPN4YDL020C RME1P32338 300 aaKnown RBP2.33□□□□□ -2.04
RPN4YDL020C KDX1P36005 433 aa2.33□□□□□ -2.04
RPN4YDL020C YHR180WP38868 163 aa2.33□□□□□ -2.04
RPN4YDL020C FCY21P40039 528 aa2.33□□□□□ -2.04
RPN4YDL020C CIS3P47001 227 aa2.33□□□□□ -2.04
RPN4YDL020C DAD3P69850 94 aa2.33□□□□□ -2.04
RPN4YDL020C TRM12Q04235 462 aa2.33□□□□□ -2.04
RPN4YDL020C DYN3Q04949 312 aa2.33□□□□□ -2.04
RPN4YDL020C YRA1Q12159 226 aaKnown RBP2.33□□□□□ -2.04
RPN4YDL020C TDA8Q6B2U8 126 aa2.33□□□□□ -2.04
RPN4YDL020C GSC2P40989 1895 aa2.33□□□□□ -2.04
RPN4YDL020C HTB1P02293 131 aaKnown RBP2.32□□□□□ -2.04
RPN4YDL020C HTB2P02294 131 aa2.32□□□□□ -2.04
RPN4YDL020C GCY1P14065 312 aaKnown RBP RIP-Chip data2.32□□□□□ -2.04not detected
RPN4YDL020C RFA3P26755 122 aaKnown RBP2.32□□□□□ -2.04
RPN4YDL020C PEX4P29340 183 aa2.32□□□□□ -2.04
RPN4YDL020C MEI4P29467 408 aa2.32□□□□□ -2.04
RPN4YDL020C MGM101P32787 269 aaKnown RBP2.32□□□□□ -2.04
RPN4YDL020C NRG2P38082 220 aa2.32□□□□□ -2.04
RPN4YDL020C PHO88P38264 188 aaPredicted RBP2.32□□□□□ -2.04
RPN4YDL020C AST2P39945 430 aaKnown RBP2.32□□□□□ -2.04
RPN4YDL020C HPM1P40481 377 aa2.32□□□□□ -2.04
RPN4YDL020C GET1P53192 235 aa2.32□□□□□ -2.04
RPN4YDL020C NOP19P53317 196 aaPredicted RBP2.32□□□□□ -2.04
RPN4YDL020C CUS2P53830 285 aaPredicted RBP2.32□□□□□ -2.04
RPN4YDL020C YMR226CQ05016 267 aaKnown RBP2.32□□□□□ -2.04
RPN4YDL020C RIF1P29539 1916 aa2.32□□□□□ -2.04
RPN4YDL020C REP2P03872 296 aa2.32□□□□□ -2.04
RPN4YDL020C FBA1P14540 359 aaKnown RBP2.32□□□□□ -2.04
RPN4YDL020C STF2P16965 84 aa2.32□□□□□ -2.04
RPN4YDL020C SCL1P21243 252 aaKnown RBP2.32□□□□□ -2.04
RPN4YDL020C ATP7P30902 174 aa2.32□□□□□ -2.04
RPN4YDL020C TCA17P32613 152 aa2.32□□□□□ -2.04
RPN4YDL020C CLG1P35190 452 aa2.32□□□□□ -2.04
RPN4YDL020C VMA22P38784 181 aa2.32□□□□□ -2.04
RPN4YDL020C RFC4P40339 323 aaKnown RBP2.32□□□□□ -2.04
RPN4YDL020C GAS3Q03655 524 aa2.32□□□□□ -2.04
RPN4YDL020C GAL83Q04739 417 aa2.32□□□□□ -2.04
RPN4YDL020C NSL1Q12143 216 aa2.32□□□□□ -2.04
RPN4YDL020C YHR086W-AQ3E746 53 aa2.32□□□□□ -2.04
RPN4YDL020C YLR156WP0CE96 114 aa2.31□□□□□ -2.04
RPN4YDL020C YLR159WP0CE97 114 aa2.31□□□□□ -2.04
RPN4YDL020C YLR161WP0CE98 114 aa2.31□□□□□ -2.04
RPN4YDL020C HSP30P25619 332 aa2.31□□□□□ -2.04
RPN4YDL020C ASF2P32448 525 aaPredicted RBP2.31□□□□□ -2.04
RPN4YDL020C SPS18P32572 300 aa2.31□□□□□ -2.04
RPN4YDL020C SKG1P36169 355 aa2.31□□□□□ -2.04
RPN4YDL020C EGD2P38879 174 aaKnown RBP2.31□□□□□ -2.04
RPN4YDL020C YRB2P40517 327 aa2.31□□□□□ -2.04
RPN4YDL020C PRM10P42946 383 aa2.31□□□□□ -2.04
RPN4YDL020C YMR099CQ03161 297 aaKnown RBP2.31□□□□□ -2.04
RPN4YDL020C RRP17Q04031 235 aaPredicted RBP2.31□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 110.4 ms