RNA–Protein interactions for RNA: YDL006W

PTC1, Transcript of Type 2C protein phosphatase (PP2C), yeastyeast

Gene PTC1, Length 846 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTC1YDL006W SIP18P50263 79 aa3.59□□□□□ -1.83
PTC1YDL006W YGL159WP53110 370 aa3.59□□□□□ -1.83
PTC1YDL006W YGR042WP53227 271 aa3.59□□□□□ -1.83
PTC1YDL006W UTP15Q04305 513 aaKnown RBP3.59□□□□□ -1.83
PTC1YDL006W HNT1Q04344 158 aaKnown RBP3.59□□□□□ -1.83
PTC1YDL006W YLR031WQ07978 186 aa3.59□□□□□ -1.83
PTC1YDL006W RFU1Q08003 200 aa3.59□□□□□ -1.83
PTC1YDL006W FIT3Q08907 204 aa3.59□□□□□ -1.83
PTC1YDL006W ODC2Q99297 307 aa3.59□□□□□ -1.83
PTC1YDL006W IRA1P18963 3092 aa3.58□□□□□ -1.84
PTC1YDL006W YBR056W-AI2HB52 66 aa3.58□□□□□ -1.84
PTC1YDL006W SPS2P08459 502 aa3.58□□□□□ -1.84
PTC1YDL006W PET54P10834 293 aa3.58□□□□□ -1.84
PTC1YDL006W GCN3P14741 305 aa3.58□□□□□ -1.84
PTC1YDL006W URA6P15700 204 aa3.58□□□□□ -1.84
PTC1YDL006W RFA3P26755 122 aaKnown RBP3.58□□□□□ -1.84
PTC1YDL006W MID2P36027 376 aa3.58□□□□□ -1.84
PTC1YDL006W MCH2P36032 473 aa3.58□□□□□ -1.84
PTC1YDL006W MRPL3P36516 390 aa3.58□□□□□ -1.84
PTC1YDL006W YBR242WP38331 238 aa3.58□□□□□ -1.84
PTC1YDL006W FLX1P40464 311 aa3.58□□□□□ -1.84
PTC1YDL006W YKE4P40544 346 aa3.58□□□□□ -1.84
PTC1YDL006W GNA1P43577 159 aaPredicted RBP3.58□□□□□ -1.84
PTC1YDL006W BXI1P48558 297 aa3.58□□□□□ -1.84
PTC1YDL006W FMP48P53233 369 aa3.58□□□□□ -1.84
PTC1YDL006W HHT1P61830 136 aa3.58□□□□□ -1.84
PTC1YDL006W BUD25P85052 153 aa3.58□□□□□ -1.84
PTC1YDL006W LAP3Q01532 483 aaKnown RBP RIP-Chip data3.58□□□□□ -1.84not detected
PTC1YDL006W YPL077CQ02831 240 aa3.58□□□□□ -1.84
PTC1YDL006W KEI1Q06346 221 aa3.58□□□□□ -1.84
PTC1YDL006W MRX9Q07349 420 aaKnown RBP3.58□□□□□ -1.84
PTC1YDL006W RRS1Q08746 203 aaKnown RBP3.58□□□□□ -1.84
PTC1YDL006W RDI1Q12434 202 aa3.58□□□□□ -1.84
PTC1YDL006W TDH2P00358 332 aaKnown RBP3.57□□□□□ -1.84
PTC1YDL006W ATG15P25641 520 aa3.57□□□□□ -1.84
PTC1YDL006W YKL063CP35725 167 aa3.57□□□□□ -1.84
PTC1YDL006W MRPS9P38120 278 aa3.57□□□□□ -1.84
PTC1YDL006W YBR220CP38318 560 aa3.57□□□□□ -1.84
PTC1YDL006W PRS3P38689 320 aaKnown RBP3.57□□□□□ -1.84
PTC1YDL006W YMR144WP40214 342 aaKnown RBP3.57□□□□□ -1.84
PTC1YDL006W OTU1P43558 301 aa3.57□□□□□ -1.84
PTC1YDL006W UBC13P52490 153 aa3.57□□□□□ -1.84
PTC1YDL006W YGL262WP53054 175 aa3.57□□□□□ -1.84
PTC1YDL006W NSA1P53136 463 aaPredicted RBP3.57□□□□□ -1.84
PTC1YDL006W RSM27P53305 110 aa3.57□□□□□ -1.84
PTC1YDL006W YDR391CQ04170 232 aa3.57□□□□□ -1.84
PTC1YDL006W YPR098CQ06089 161 aa3.57□□□□□ -1.84
PTC1YDL006W CDC28P00546 298 aaKnown RBP3.56□□□□□ -1.84
PTC1YDL006W RPL25P04456 142 aaKnown RBP3.56□□□□□ -1.84
PTC1YDL006W BUD23P25627 275 aaPredicted RBP3.56□□□□□ -1.84
PTC1YDL006W ARO4P32449 370 aaKnown RBP3.56□□□□□ -1.84
PTC1YDL006W YHL037CP38733 133 aa3.56□□□□□ -1.84
PTC1YDL006W LSM1P47017 172 aaKnown RBP3.56□□□□□ -1.84
PTC1YDL006W DIE2P50076 525 aa3.56□□□□□ -1.84
PTC1YDL006W YDC1Q02896 317 aa3.56□□□□□ -1.84
PTC1YDL006W YML018CQ03730 393 aa3.56□□□□□ -1.84
PTC1YDL006W YDR248CQ03786 193 aa3.56□□□□□ -1.84
PTC1YDL006W YDR115WQ04598 105 aa3.56□□□□□ -1.84
PTC1YDL006W RPL21BQ12672 160 aaKnown RBP3.56□□□□□ -1.84
PTC1YDL006W VPS63O13549 108 aa3.55□□□□□ -1.84
PTC1YDL006W REP2P03872 296 aa3.55□□□□□ -1.84
PTC1YDL006W SAR1P20606 190 aaKnown RBP3.55□□□□□ -1.84
PTC1YDL006W ATG22P25568 528 aa3.55□□□□□ -1.84
PTC1YDL006W YPS1P32329 569 aa3.55□□□□□ -1.84
PTC1YDL006W YFL051CP43552 160 aa3.55□□□□□ -1.84
PTC1YDL006W LOC1P43586 204 aaPredicted RBP3.55□□□□□ -1.84
PTC1YDL006W UFD1P53044 361 aa3.55□□□□□ -1.84
PTC1YDL006W HCH1P53834 153 aa3.55□□□□□ -1.84
PTC1YDL006W ALG9P53868 555 aaKnown RBP3.55□□□□□ -1.84
PTC1YDL006W YPL067CQ02754 198 aa3.55□□□□□ -1.84
PTC1YDL006W CAB5Q03941 241 aa3.55□□□□□ -1.84
PTC1YDL006W PIN3Q06449 215 aa3.55□□□□□ -1.84
PTC1YDL006W YOR186WQ08560 144 aa3.55□□□□□ -1.84
PTC1YDL006W PRM4Q12498 284 aa3.55□□□□□ -1.84
PTC1YDL006W HUT1Q12520 339 aa3.55□□□□□ -1.84
PTC1YDL006W MEC1P38111 2368 aa3.55□□□□□ -1.84
PTC1YDL006W TPI1P00942 248 aaKnown RBP3.54□□□□□ -1.84
PTC1YDL006W RPS23AP0CX29 145 aaKnown RBP3.54□□□□□ -1.84
PTC1YDL006W RPS23BP0CX30 145 aa3.54□□□□□ -1.84
PTC1YDL006W RPL18AP0CX49 186 aaKnown RBP3.54□□□□□ -1.84
PTC1YDL006W RPL18BP0CX50 186 aaKnown RBP3.54□□□□□ -1.84
PTC1YDL006W NHP6BP11633 99 aaKnown RBP3.54□□□□□ -1.84
PTC1YDL006W IFM1P25038 676 aa3.54□□□□□ -1.84
PTC1YDL006W YCR101CP25607 182 aa3.54□□□□□ -1.84
PTC1YDL006W CDC39P25655 2108 aaKnown RBP3.54□□□□□ -1.84
PTC1YDL006W PAN3P36102 679 aaPredicted RBP3.54□□□□□ -1.84
PTC1YDL006W YGP1P38616 354 aaKnown RBP3.54□□□□□ -1.84
PTC1YDL006W MRX5P47007 382 aa3.54□□□□□ -1.84
PTC1YDL006W RPL21AQ02753 160 aaKnown RBP3.54□□□□□ -1.84
PTC1YDL006W PRM15Q03262 622 aa3.54□□□□□ -1.84
PTC1YDL006W VBA1Q04301 562 aa3.54□□□□□ -1.84
PTC1YDL006W MCH1Q07376 486 aa3.54□□□□□ -1.84
PTC1YDL006W YOR385WQ08909 290 aa3.54□□□□□ -1.84
PTC1YDL006W ATG40Q99325 256 aa3.54□□□□□ -1.84
PTC1YDL006W PET20Q99373 253 aa3.54□□□□□ -1.84
PTC1YDL006W ADH1P00330 348 aaKnown RBP3.53□□□□□ -1.84
PTC1YDL006W SSA3P09435 649 aaKnown RBP3.53□□□□□ -1.84
PTC1YDL006W RPL43AP0CX25 92 aaKnown RBP3.53□□□□□ -1.84
PTC1YDL006W RPL43BP0CX26 92 aa3.53□□□□□ -1.84
PTC1YDL006W SPS100P13130 326 aa3.53□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 78 ms