RNA–Protein interactions for RNA: YBR289W

SNF5, Transcript of Subunit of the SWI/SNF chromatin remodeling complex, yeastyeast

Gene SNF5, Length 2,718 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNF5YBR289W PHO88P38264 188 aaPredicted RBP1.09□□□□□ -2.23
SNF5YBR289W DOG2P38773 246 aa1.09□□□□□ -2.23
SNF5YBR289W PRE6P40303 254 aaKnown RBP1.09□□□□□ -2.23
SNF5YBR289W RSM25P40496 264 aa1.09□□□□□ -2.23
SNF5YBR289W YGR026WP53217 278 aa1.09□□□□□ -2.23
SNF5YBR289W DAD3P69850 94 aa1.09□□□□□ -2.23
SNF5YBR289W YOL160WQ08321 113 aa1.09□□□□□ -2.23
SNF5YBR289W CMC2Q3E7A4 109 aa1.09□□□□□ -2.23
SNF5YBR289W SPS18P32572 300 aa1.09□□□□□ -2.23
SNF5YBR289W SSO1P32867 290 aa1.09□□□□□ -2.23
SNF5YBR289W APS1P35181 156 aa1.09□□□□□ -2.23
SNF5YBR289W MRPL28P36527 147 aa1.09□□□□□ -2.23
SNF5YBR289W YIL001WP40560 513 aa1.09□□□□□ -2.23
SNF5YBR289W UBC12P52491 188 aa1.09□□□□□ -2.23
SNF5YBR289W GAS3Q03655 524 aa1.09□□□□□ -2.23
SNF5YBR289W GPM2Q12008 311 aa1.09□□□□□ -2.23
SNF5YBR289W TDA8Q6B2U8 126 aa1.09□□□□□ -2.23
SNF5YBR289W GCN2P15442 1659 aa1.09□□□□□ -2.24
SNF5YBR289W CNB1P25296 175 aa1.09□□□□□ -2.24
SNF5YBR289W EGD2P38879 174 aaKnown RBP1.09□□□□□ -2.24
SNF5YBR289W YAR068WP39564 161 aa1.09□□□□□ -2.24
SNF5YBR289W SEC72P39742 193 aaKnown RBP1.09□□□□□ -2.24
SNF5YBR289W YER135CP40082 130 aa1.09□□□□□ -2.24
SNF5YBR289W COG5P53951 403 aa1.09□□□□□ -2.24
SNF5YBR289W SNQ2P32568 1501 aaKnown RBP1.08□□□□□ -2.24
SNF5YBR289W NUP188P52593 1655 aaKnown RBP1.08□□□□□ -2.24
SNF5YBR289W TY1B-DR3Q99231 1755 aa1.08□□□□□ -2.24
SNF5YBR289W CDC8P00572 216 aa1.08□□□□□ -2.24
SNF5YBR289W PUT1P09368 476 aa1.08□□□□□ -2.24
SNF5YBR289W RPL35AP0CX84 120 aaKnown RBP1.08□□□□□ -2.24
SNF5YBR289W RPL35BP0CX85 120 aaKnown RBP1.08□□□□□ -2.24
SNF5YBR289W VMA11P32842 164 aa1.08□□□□□ -2.24
SNF5YBR289W YKR041WP36134 250 aa1.08□□□□□ -2.24
SNF5YBR289W TRM5P38793 499 aa1.08□□□□□ -2.24
SNF5YBR289W EFM5P53200 248 aaKnown RBP1.08□□□□□ -2.24
SNF5YBR289W FYV6P53913 173 aa1.08□□□□□ -2.24
SNF5YBR289W SWP1Q02795 286 aa1.08□□□□□ -2.24
SNF5YBR289W YMD8Q03697 442 aa1.08□□□□□ -2.24
SNF5YBR289W CAT8P39113 1433 aa1.08□□□□□ -2.24
SNF5YBR289W YSP2Q06681 1438 aa1.08□□□□□ -2.24
SNF5YBR289W YPR170W-BP0C5R9 85 aa1.08□□□□□ -2.24
SNF5YBR289W GCN3P14741 305 aa1.08□□□□□ -2.24
SNF5YBR289W MDH3P32419 343 aaKnown RBP RIP-Chip data1.08□□□□□ -2.24not detected
SNF5YBR289W YHR022CP38763 256 aa1.08□□□□□ -2.24
SNF5YBR289W PRM8P53174 237 aa1.08□□□□□ -2.24
SNF5YBR289W YIP3P53633 176 aa1.08□□□□□ -2.24
SNF5YBR289W LSM7P53905 115 aaKnown RBP1.08□□□□□ -2.24
SNF5YBR289W ATO3Q12359 275 aa1.08□□□□□ -2.24
SNF5YBR289W YPR117WQ06116 2489 aa1.07□□□□□ -2.24
SNF5YBR289W TY3B-IQ7LHG5 1498 aaKnown RBP1.07□□□□□ -2.24
SNF5YBR289W CPA1P07258 411 aaKnown RBP1.07□□□□□ -2.24
SNF5YBR289W FBA1P14540 359 aaKnown RBP1.07□□□□□ -2.24
SNF5YBR289W RPB3P16370 318 aaKnown RBP1.07□□□□□ -2.24
SNF5YBR289W ERV15P38312 142 aa1.07□□□□□ -2.24
SNF5YBR289W YKE4P40544 346 aa1.07□□□□□ -2.24
SNF5YBR289W TIR3P40552 269 aa1.07□□□□□ -2.24
SNF5YBR289W MSW1P04803 379 aa1.07□□□□□ -2.24
SNF5YBR289W MRS1P07266 363 aa1.07□□□□□ -2.24
SNF5YBR289W POP4P38336 279 aa1.07□□□□□ -2.24
SNF5YBR289W ARP3P47117 449 aaKnown RBP1.07□□□□□ -2.24
SNF5YBR289W AIF1P52923 378 aa1.07□□□□□ -2.24
SNF5YBR289W MMS2P53152 137 aa1.07□□□□□ -2.24
SNF5YBR289W POP3P53833 195 aaPredicted RBP1.07□□□□□ -2.24
SNF5YBR289W YER121WP40076 114 aa1.06□□□□□ -2.24
SNF5YBR289W POG1P40473 351 aa1.06□□□□□ -2.24
SNF5YBR289W CYT2Q00873 224 aa1.06□□□□□ -2.24
SNF5YBR289W SNO1Q03144 224 aa1.06□□□□□ -2.24
SNF5YBR289W FSF1Q12029 327 aaKnown RBP1.06□□□□□ -2.24
SNF5YBR289W RRP5Q05022 1729 aaKnown RBP1.06□□□□□ -2.24
SNF5YBR289W CUP1-1P0CX80 61 aa1.06□□□□□ -2.24
SNF5YBR289W CUP1-2P0CX81 61 aa1.06□□□□□ -2.24
SNF5YBR289W YCR090CP25654 182 aaKnown RBP1.06□□□□□ -2.24
SNF5YBR289W SVP26P38869 228 aa1.06□□□□□ -2.24
SNF5YBR289W VTC1P40046 129 aaRIP-Chip data1.06□□□□□ -2.24not detected
SNF5YBR289W YLR162WQ06235 118 aa1.06□□□□□ -2.24
SNF5YBR289W TIM9O74700 87 aa1.05□□□□□ -2.24
SNF5YBR289W VPS51P36116 164 aa1.05□□□□□ -2.24
SNF5YBR289W SRP14P38985 146 aa1.05□□□□□ -2.24
SNF5YBR289W GAA1P39012 614 aa1.05□□□□□ -2.24
SNF5YBR289W ERG25P53045 309 aa1.05□□□□□ -2.24
SNF5YBR289W NAT3Q06504 195 aa1.05□□□□□ -2.24
SNF5YBR289W MEU1Q07938 337 aaKnown RBP RIP-Chip data1.05□□□□□ -2.24not detected
SNF5YBR289W GCY1P14065 312 aaKnown RBP RIP-Chip data1.05□□□□□ -2.24not detected
SNF5YBR289W OCH1P31755 480 aa1.05□□□□□ -2.24
SNF5YBR289W GRX8Q05926 109 aa1.05□□□□□ -2.24
SNF5YBR289W CSI2Q08054 341 aa1.05□□□□□ -2.24
SNF5YBR289W PHO85P17157 305 aa1.04□□□□□ -2.24
SNF5YBR289W PTM1P32857 523 aa1.04□□□□□ -2.24
SNF5YBR289W UBC6P33296 250 aaPredicted RBP1.04□□□□□ -2.24
SNF5YBR289W PGD1P40356 397 aa1.04□□□□□ -2.24
SNF5YBR289W GVP36P40531 326 aaKnown RBP1.04□□□□□ -2.24
SNF5YBR289W CIS3P47001 227 aa1.04□□□□□ -2.24
SNF5YBR289W YGR219WP53307 113 aa1.04□□□□□ -2.24
SNF5YBR289W YNL140CP53910 189 aa1.04□□□□□ -2.24
SNF5YBR289W NRK1P53915 240 aa1.04□□□□□ -2.24
SNF5YBR289W YLR460CP54007 376 aa1.04□□□□□ -2.24
SNF5YBR289W NOC4Q06512 552 aaPredicted RBP1.04□□□□□ -2.24
SNF5YBR289W LSO2Q3E772 92 aaKnown RBP1.04□□□□□ -2.24
SNF5YBR289W HFA1P32874 2273 aa1.04□□□□□ -2.24
SNF5YBR289W SIR2P06700 562 aa1.04□□□□□ -2.24
Retrieved 100 of 5,963 RNA–protein pairs in 174 ms