RNA–Protein interactions for RNA: YAL043C

PTA1, Transcript of Subunit of holo-CPF, yeastyeast

Gene PTA1, Length 2,358 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTA1YAL043C CDC28P00546 298 aaKnown RBP3.49□□□□□ -1.85
PTA1YAL043C FCY2P17064 533 aa3.49□□□□□ -1.85
PTA1YAL043C YGL010WP25338 174 aa3.49□□□□□ -1.85
PTA1YAL043C RPB7P34087 171 aa3.49□□□□□ -1.85
PTA1YAL043C SEC72P39742 193 aaKnown RBP3.49□□□□□ -1.85
PTA1YAL043C RPA34P47006 233 aaPredicted RBP3.49□□□□□ -1.85
PTA1YAL043C PGU1P47180 361 aa3.49□□□□□ -1.85
PTA1YAL043C YGL262WP53054 175 aa3.49□□□□□ -1.85
PTA1YAL043C CGI121Q03705 181 aaKnown RBP3.49□□□□□ -1.85
PTA1YAL043C RIM9Q04734 239 aa3.49□□□□□ -1.85
PTA1YAL043C DAL4Q04895 635 aa3.49□□□□□ -1.85
PTA1YAL043C MSC3Q05812 728 aa3.49□□□□□ -1.85
PTA1YAL043C CTR3Q06686 241 aa3.49□□□□□ -1.85
PTA1YAL043C ALG6Q12001 544 aaKnown RBP3.49□□□□□ -1.85
PTA1YAL043C YBR255C-AQ3E776 120 aa3.49□□□□□ -1.85
PTA1YAL043C NHP6AP11632 93 aaKnown RBP3.49□□□□□ -1.85
PTA1YAL043C SPO7P18410 259 aa3.49□□□□□ -1.85
PTA1YAL043C EHD3P28817 500 aa3.49□□□□□ -1.85
PTA1YAL043C DEG1P31115 442 aaKnown RBP3.49□□□□□ -1.85
PTA1YAL043C MRPL15P36523 253 aa3.49□□□□□ -1.85
PTA1YAL043C QDR3P38227 689 aa3.49□□□□□ -1.85
PTA1YAL043C PIC2P40035 300 aa3.49□□□□□ -1.85
PTA1YAL043C YER121WP40076 114 aa3.49□□□□□ -1.85
PTA1YAL043C YGR149WP48236 432 aa3.49□□□□□ -1.85
PTA1YAL043C YNR048WP53740 393 aa3.49□□□□□ -1.85
PTA1YAL043C YMR210WQ03649 449 aa3.49□□□□□ -1.85
PTA1YAL043C YMR007WQ03675 126 aa3.49□□□□□ -1.85
PTA1YAL043C YDR215CQ12240 137 aa3.49□□□□□ -1.85
PTA1YAL043C WIP1Q2V2P8 89 aa3.49□□□□□ -1.85
PTA1YAL043C HTB1P02293 131 aaKnown RBP3.48□□□□□ -1.85
PTA1YAL043C HTB2P02294 131 aa3.48□□□□□ -1.85
PTA1YAL043C BGL2P15703 313 aaKnown RBP3.48□□□□□ -1.85
PTA1YAL043C SEC59P20048 519 aa3.48□□□□□ -1.85
PTA1YAL043C ICS2P38284 255 aa3.48□□□□□ -1.85
PTA1YAL043C SHG1P38337 142 aa3.48□□□□□ -1.85
PTA1YAL043C PEX7P39108 375 aa3.48□□□□□ -1.85
PTA1YAL043C RPS26AP39938 119 aaKnown RBP3.48□□□□□ -1.85
PTA1YAL043C RPS26BP39939 119 aaKnown RBP3.48□□□□□ -1.85
PTA1YAL043C GEP7P53171 287 aa3.48□□□□□ -1.85
PTA1YAL043C DAD3P69850 94 aa3.48□□□□□ -1.85
PTA1YAL043C AVO2Q04749 426 aa3.48□□□□□ -1.85
PTA1YAL043C RAF1Q06891 181 aa3.48□□□□□ -1.85
PTA1YAL043C FRE8Q12209 686 aa3.48□□□□□ -1.85
PTA1YAL043C POC4Q12245 148 aaPredicted RBP3.48□□□□□ -1.85
PTA1YAL043C PRR2Q12310 699 aa3.48□□□□□ -1.85
PTA1YAL043C RPS25BP0C0T4 108 aaKnown RBP3.48□□□□□ -1.85
PTA1YAL043C MSN1P22148 382 aa3.48□□□□□ -1.85
PTA1YAL043C IMP1P28627 190 aa3.48□□□□□ -1.85
PTA1YAL043C SCM4P32564 187 aa3.48□□□□□ -1.85
PTA1YAL043C CLB6P32943 380 aa3.48□□□□□ -1.85
PTA1YAL043C AIM29P36154 155 aa3.48□□□□□ -1.85
PTA1YAL043C YPC1P38298 316 aa3.48□□□□□ -1.85
PTA1YAL043C YIL163CP40448 117 aa3.48□□□□□ -1.85
PTA1YAL043C SMX3P54999 86 aaPredicted RBP3.48□□□□□ -1.85
PTA1YAL043C RSM23Q01163 450 aa3.48□□□□□ -1.85
PTA1YAL043C YPL108WQ02872 168 aaPredicted RBP3.48□□□□□ -1.85
PTA1YAL043C LDS2Q08218 356 aa3.48□□□□□ -1.85
PTA1YAL043C ERV2Q12284 196 aa3.48□□□□□ -1.85
PTA1YAL043C RPS25AQ3E792 108 aaPredicted RBP3.48□□□□□ -1.85
PTA1YAL043C PAU1P0CE88 120 aa3.47□□□□□ -1.85
PTA1YAL043C PAU14P0CE89 120 aa3.47□□□□□ -1.85
PTA1YAL043C PAU6P0CE90 120 aa3.47□□□□□ -1.85
PTA1YAL043C PAU18P0CE91 120 aa3.47□□□□□ -1.85
PTA1YAL043C PAU8P0CE92 120 aa3.47□□□□□ -1.85
PTA1YAL043C PAU11P0CE93 120 aa3.47□□□□□ -1.85
PTA1YAL043C FUN14P18411 198 aa3.47□□□□□ -1.85
PTA1YAL043C YBR090CP38253 122 aa3.47□□□□□ -1.85
PTA1YAL043C PAU13P38725 120 aa3.47□□□□□ -1.85
PTA1YAL043C SPC25P40014 221 aa3.47□□□□□ -1.85
PTA1YAL043C PRY1P47032 299 aa3.47□□□□□ -1.85
PTA1YAL043C SUT1P53032 299 aaKnown RBP3.47□□□□□ -1.85
PTA1YAL043C PAU4P53427 120 aa3.47□□□□□ -1.85
PTA1YAL043C PDR17P53844 350 aa3.47□□□□□ -1.85
PTA1YAL043C PAU10Q03050 120 aa3.47□□□□□ -1.85
PTA1YAL043C TRS23Q03784 219 aa3.47□□□□□ -1.85
PTA1YAL043C PAU20Q08322 120 aa3.47□□□□□ -1.85
PTA1YAL043C FIT3Q08907 204 aa3.47□□□□□ -1.85
PTA1YAL043C CSM4Q08955 156 aa3.47□□□□□ -1.85
PTA1YAL043C YOP1Q12402 180 aa3.47□□□□□ -1.85
PTA1YAL043C IZH2Q12442 317 aa3.47□□□□□ -1.85
PTA1YAL043C PAU9Q3E770 120 aa3.47□□□□□ -1.85
PTA1YAL043C YPR014CQ6B0W2 109 aa3.47□□□□□ -1.85
PTA1YAL043C GLT1Q12680 2145 aaKnown RBP3.47□□□□□ -1.85
PTA1YAL043C YMR316C-AI2HB70 103 aa3.47□□□□□ -1.85
PTA1YAL043C YLR302CO13544 120 aa3.47□□□□□ -1.85
PTA1YAL043C SAG1P20840 650 aa3.47□□□□□ -1.85
PTA1YAL043C PRE9P23638 258 aaKnown RBP3.47□□□□□ -1.85
PTA1YAL043C ERV1P27882 189 aa3.47□□□□□ -1.85
PTA1YAL043C MRPS5P33759 307 aa3.47□□□□□ -1.85
PTA1YAL043C HNT2P49775 206 aa3.47□□□□□ -1.85
PTA1YAL043C OCA2P53949 197 aa3.47□□□□□ -1.85
PTA1YAL043C DYN2Q02647 92 aa3.47□□□□□ -1.85
PTA1YAL043C YPR098CQ06089 161 aa3.47□□□□□ -1.85
PTA1YAL043C CSI2Q08054 341 aa3.47□□□□□ -1.85
PTA1YAL043C YPR063CQ12160 140 aa3.47□□□□□ -1.85
PTA1YAL043C MPD1Q12404 318 aaKnown RBP3.47□□□□□ -1.85
PTA1YAL043C YPR108W-AQ3E7B3 70 aa3.47□□□□□ -1.85
PTA1YAL043C MRP10O75012 95 aa3.46□□□□□ -1.86
PTA1YAL043C MRS3P10566 314 aa3.46□□□□□ -1.86
PTA1YAL043C RPS2P25443 254 aaKnown RBP3.46□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 16.1 ms