RNA–Protein interactions for RNA: YAL030W

SNC1, Transcript of Vesicle membrane receptor protein (v-SNARE), yeastyeast

Gene SNC1, Length 354 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytosol, Endoplasmic reticulum, Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNC1YAL030W DGA1Q08650 418 aa1.43□□□□□ -2.18
SNC1YAL030W YLR053CQ12026 108 aa1.43□□□□□ -2.18
SNC1YAL030W NSL1Q12143 216 aa1.43□□□□□ -2.18
SNC1YAL030W YLR412C-AQ3E742 68 aa1.43□□□□□ -2.18
SNC1YAL030W YAR023CD6VPM8 179 aa1.42□□□□□ -2.18
SNC1YAL030W SCL1P21243 252 aaKnown RBP1.42□□□□□ -2.18
SNC1YAL030W YKL102CP34249 101 aa1.42□□□□□ -2.18
SNC1YAL030W YET1P35723 206 aa1.42□□□□□ -2.18
SNC1YAL030W PHO88P38264 188 aaPredicted RBP1.42□□□□□ -2.18
SNC1YAL030W ERV15P38312 142 aa1.42□□□□□ -2.18
SNC1YAL030W NSG1P38837 291 aa1.42□□□□□ -2.18
SNC1YAL030W AVT2P39981 480 aa1.42□□□□□ -2.18
SNC1YAL030W YEA4P40004 342 aa1.42□□□□□ -2.18
SNC1YAL030W TIR3P40552 269 aa1.42□□□□□ -2.18
SNC1YAL030W XPT1P47165 209 aa1.42□□□□□ -2.18
SNC1YAL030W BOL2P53082 120 aa1.42□□□□□ -2.18
SNC1YAL030W MIX17Q03667 156 aa1.42□□□□□ -2.18
SNC1YAL030W RDS3Q06835 107 aaPredicted RBP1.42□□□□□ -2.18
SNC1YAL030W ATO3Q12359 275 aa1.42□□□□□ -2.18
SNC1YAL030W PEX11Q12462 236 aa1.42□□□□□ -2.18
SNC1YAL030W ATG40Q99325 256 aa1.42□□□□□ -2.18
SNC1YAL030W FIG1P38224 298 aa1.41□□□□□ -2.18
SNC1YAL030W YDR274CP87283 123 aa1.41□□□□□ -2.18
SNC1YAL030W NAT3Q06504 195 aa1.41□□□□□ -2.18
SNC1YAL030W YOR342CQ12182 319 aa1.41□□□□□ -2.18
SNC1YAL030W DGK1Q12382 290 aa1.41□□□□□ -2.18
SNC1YAL030W RDI1Q12434 202 aa1.41□□□□□ -2.18
SNC1YAL030W RAS2P01120 322 aaKnown RBP1.4□□□□□ -2.19
SNC1YAL030W DDI2P0CH63 225 aa1.4□□□□□ -2.19
SNC1YAL030W DDI3P0CH64 225 aa1.4□□□□□ -2.19
SNC1YAL030W SPO13P23624 291 aa1.4□□□□□ -2.19
SNC1YAL030W EDC3P39998 551 aaKnown RBP1.4□□□□□ -2.19
SNC1YAL030W VTC1P40046 129 aaRIP-Chip data1.4□□□□□ -2.19not detected
SNC1YAL030W RFC2P40348 353 aa1.4□□□□□ -2.19
SNC1YAL030W YFL019CP43576 117 aa1.4□□□□□ -2.19
SNC1YAL030W ERG25P53045 309 aa1.4□□□□□ -2.19
SNC1YAL030W MPA43P53583 542 aaPredicted RBP1.4□□□□□ -2.19
SNC1YAL030W HSK3P69852 69 aa1.4□□□□□ -2.19
SNC1YAL030W TMA20P89886 181 aaPredicted RBP1.4□□□□□ -2.19
SNC1YAL030W PDR18P53756 1333 aa1.4□□□□□ -2.19
SNC1YAL030W RIF1P29539 1916 aa1.39□□□□□ -2.19
SNC1YAL030W POR1P04840 283 aaKnown RBP1.39□□□□□ -2.19
SNC1YAL030W PHO85P17157 305 aa1.39□□□□□ -2.19
SNC1YAL030W NUF2P33895 451 aa1.39□□□□□ -2.19
SNC1YAL030W DER1P38307 211 aa1.39□□□□□ -2.19
SNC1YAL030W YBR209WP38311 105 aa1.39□□□□□ -2.19
SNC1YAL030W YNL217WP40152 326 aa1.39□□□□□ -2.19
SNC1YAL030W GPI14P47088 403 aaKnown RBP1.39□□□□□ -2.19
SNC1YAL030W TTI2P47168 421 aa1.39□□□□□ -2.19
SNC1YAL030W MPC3P53311 146 aa1.39□□□□□ -2.19
SNC1YAL030W MAK3Q03503 176 aa1.39□□□□□ -2.19
SNC1YAL030W YOL014WQ08110 124 aa1.39□□□□□ -2.19
SNC1YAL030W YDL180WQ12301 547 aa1.39□□□□□ -2.19
SNC1YAL030W EFG1Q3E705 233 aaKnown RBP1.39□□□□□ -2.19
SNC1YAL030W YML100W-AQ8TGT0 57 aa1.39□□□□□ -2.19
SNC1YAL030W TFC1P32367 649 aa1.38□□□□□ -2.19
SNC1YAL030W FZF1P32805 299 aa1.38□□□□□ -2.19
SNC1YAL030W YHR022CP38763 256 aa1.38□□□□□ -2.19
SNC1YAL030W FCY21P40039 528 aa1.38□□□□□ -2.19
SNC1YAL030W AGE2P40529 298 aa1.38□□□□□ -2.19
SNC1YAL030W EAF6P47128 113 aa1.38□□□□□ -2.19
SNC1YAL030W YNR077CP53758 84 aa1.38□□□□□ -2.19
SNC1YAL030W RGM1Q00453 211 aa1.38□□□□□ -2.19
SNC1YAL030W CYT2Q00873 224 aa1.38□□□□□ -2.19
SNC1YAL030W VPS71Q03433 280 aa1.38□□□□□ -2.19
SNC1YAL030W YMR295CQ03559 197 aa1.38□□□□□ -2.19
SNC1YAL030W YPR127WQ06494 345 aa1.38□□□□□ -2.19
SNC1YAL030W DUR1,2P32528 1835 aaKnown RBP1.38□□□□□ -2.19
SNC1YAL030W YLR236CA0A023PZG4 107 aa1.37□□□□□ -2.19
SNC1YAL030W DSE2P38844 325 aa1.37□□□□□ -2.19
SNC1YAL030W NSA2P40078 261 aaKnown RBP1.37□□□□□ -2.19
SNC1YAL030W YNL200CP40165 246 aaKnown RBP1.37□□□□□ -2.19
SNC1YAL030W YFH7P43591 353 aa1.37□□□□□ -2.19
SNC1YAL030W YFR054CP43622 192 aa1.37□□□□□ -2.19
SNC1YAL030W YJL027CP47063 138 aaPredicted RBP1.37□□□□□ -2.19
SNC1YAL030W DAN1P47178 298 aa1.37□□□□□ -2.19
SNC1YAL030W SHH3Q04487 196 aa1.37□□□□□ -2.19
SNC1YAL030W DAS2Q12084 232 aa1.37□□□□□ -2.19
SNC1YAL030W PET20Q99373 253 aa1.37□□□□□ -2.19
SNC1YAL030W TIR1P10863 254 aa1.36□□□□□ -2.19
SNC1YAL030W MDH2P22133 377 aa1.36□□□□□ -2.19
SNC1YAL030W YCR023CP25351 611 aa1.36□□□□□ -2.19
SNC1YAL030W SLM6P38343 150 aa1.36□□□□□ -2.19
SNC1YAL030W GAA1P39012 614 aa1.36□□□□□ -2.19
SNC1YAL030W SPC25P40014 221 aa1.36□□□□□ -2.19
SNC1YAL030W CUP9P41817 306 aa1.36□□□□□ -2.19
SNC1YAL030W GLR1P41921 483 aaKnown RBP1.36□□□□□ -2.19
SNC1YAL030W ERJ5P43613 295 aaPredicted RBP1.36□□□□□ -2.19
SNC1YAL030W LSM1P47017 172 aaKnown RBP1.36□□□□□ -2.19
SNC1YAL030W MOG1P47123 218 aa1.36□□□□□ -2.19
SNC1YAL030W MET5P47169 1442 aa1.36□□□□□ -2.19
SNC1YAL030W SOL1P50278 321 aa1.36□□□□□ -2.19
SNC1YAL030W YGL235WP53071 178 aa1.36□□□□□ -2.19
SNC1YAL030W SAY1P53324 424 aa1.36□□□□□ -2.19
SNC1YAL030W POP3P53833 195 aaPredicted RBP1.36□□□□□ -2.19
SNC1YAL030W LSM3P57743 89 aaKnown RBP1.36□□□□□ -2.19
SNC1YAL030W YMR099CQ03161 297 aaKnown RBP1.36□□□□□ -2.19
SNC1YAL030W YDR476CQ03362 224 aa1.36□□□□□ -2.19
SNC1YAL030W THI74Q04083 370 aa1.36□□□□□ -2.19
SNC1YAL030W CUE4Q04201 117 aaPredicted RBP1.36□□□□□ -2.19
Retrieved 100 of 5,963 RNA–protein pairs in 89 ms