RNA–Protein interactions for RNA: ENST00000600888.2

CKS1BP3-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 3, humanhuman

BASIC

Gene CKS1BP3, Length 237 nt, Biotype processed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP3-201ENST00000600888 CEP72Q9P209 647 aa4.67□□□□□ -1.66
CKS1BP3-201ENST00000600888 IP6K2Q9UHH9 426 aa4.67□□□□□ -1.66
CKS1BP3-201ENST00000600888 THRAP3Q9Y2W1 955 aaKnown RBP4.67□□□□□ -1.66
CKS1BP3-201ENST00000600888 ACTL7AQ9Y615 435 aa4.67□□□□□ -1.66
CKS1BP3-201ENST00000600888 RGPD3A6NKT7 1758 aaPredicted RBP4.67□□□□□ -1.66
CKS1BP3-201ENST00000600888 RGPD4Q7Z3J3 1758 aa4.67□□□□□ -1.66
CKS1BP3-201ENST00000600888 PNPLA7Q6ZV29 1317 aa4.67□□□□□ -1.66
CKS1BP3-201ENST00000600888 KIF20BQ96Q89 1820 aa4.67□□□□□ -1.66
CKS1BP3-201ENST00000600888 MYOM1P52179 1685 aa4.67□□□□□ -1.66
CKS1BP3-201ENST00000600888 PEAK1Q9H792 1746 aa4.66□□□□□ -1.66
CKS1BP3-201ENST00000600888 DISP2A7MBM2 1401 aa4.66□□□□□ -1.66
CKS1BP3-201ENST00000600888 CRB1P82279 1406 aa4.66□□□□□ -1.66
CKS1BP3-201ENST00000600888 LRRC37A3O60309 1634 aa4.66□□□□□ -1.66
CKS1BP3-201ENST00000600888 TEX33O43247 280 aa4.66□□□□□ -1.66
CKS1BP3-201ENST00000600888 ABLIM3O94929 683 aa4.66□□□□□ -1.66
CKS1BP3-201ENST00000600888 IL33O95760 270 aa4.66□□□□□ -1.66
CKS1BP3-201ENST00000600888 AMHP03971 560 aa4.66□□□□□ -1.66
CKS1BP3-201ENST00000600888 DDCP20711 480 aa4.66□□□□□ -1.66
CKS1BP3-201ENST00000600888 ALDH1A3P47895 512 aa4.66□□□□□ -1.66
CKS1BP3-201ENST00000600888 RAB27AP51159 221 aa4.66□□□□□ -1.66
CKS1BP3-201ENST00000600888 ATP8B2P98198 1209 aa4.66□□□□□ -1.66
CKS1BP3-201ENST00000600888 CDC42EP1Q00587 391 aa4.66□□□□□ -1.66
CKS1BP3-201ENST00000600888 FOXE3Q13461 319 aa4.66□□□□□ -1.66
CKS1BP3-201ENST00000600888 TOB2Q14106 344 aaPredicted RBP4.66□□□□□ -1.66
CKS1BP3-201ENST00000600888 PUM1Q14671 1186 aaKnown RBP eCLIP4.66□□□□□ -1.66
CKS1BP3-201ENST00000600888 OTUD7BQ6GQQ9 843 aa4.66□□□□□ -1.66
CKS1BP3-201ENST00000600888 DBX2Q6ZNG2 339 aa4.66□□□□□ -1.66
CKS1BP3-201ENST00000600888 KRT27Q7Z3Y8 459 aa4.66□□□□□ -1.66
CKS1BP3-201ENST00000600888 GGNQ86UU5 652 aa4.66□□□□□ -1.66
CKS1BP3-201ENST00000600888 ARHGEF25Q86VW2 580 aa4.66□□□□□ -1.66
CKS1BP3-201ENST00000600888 RNF169Q8NCN4 708 aa4.66□□□□□ -1.66
CKS1BP3-201ENST00000600888 HSPBAP1Q96EW2 488 aa4.66□□□□□ -1.66
CKS1BP3-201ENST00000600888 NDC1Q9BTX1 674 aa4.66□□□□□ -1.66
CKS1BP3-201ENST00000600888 TDP1Q9NUW8 608 aa4.66□□□□□ -1.66
CKS1BP3-201ENST00000600888 PARPBPQ9NWS1 579 aa4.66□□□□□ -1.66
CKS1BP3-201ENST00000600888 ANKRD6Q9Y2G4 727 aa4.66□□□□□ -1.66
CKS1BP3-201ENST00000600888 PCDHB1Q9Y5F3 818 aa4.66□□□□□ -1.66
CKS1BP3-201ENST00000600888 MAP2P11137 1827 aaKnown RBP4.66□□□□□ -1.66
CKS1BP3-201ENST00000600888 KAT6BQ8WYB5 2073 aa4.66□□□□□ -1.66
CKS1BP3-201ENST00000600888 USP47Q96K76 1375 aa4.65□□□□□ -1.66
CKS1BP3-201ENST00000600888 OVOS2A0A0J9YW53 1432 aa4.65□□□□□ -1.66
CKS1BP3-201ENST00000600888 OVOS2Q6IE36 1432 aa4.65□□□□□ -1.66
CKS1BP3-201ENST00000600888 RREB1Q92766 1687 aa4.65□□□□□ -1.66
CKS1BP3-201ENST00000600888 DRGXA6NNA5 263 aa4.65□□□□□ -1.67
CKS1BP3-201ENST00000600888 GRXCR1A8MXD5 290 aa4.65□□□□□ -1.67
CKS1BP3-201ENST00000600888 LEFTY2O00292 366 aa4.65□□□□□ -1.67
CKS1BP3-201ENST00000600888 MATN3O15232 486 aa4.65□□□□□ -1.67
CKS1BP3-201ENST00000600888 AKAP10O43572 662 aa4.65□□□□□ -1.67
CKS1BP3-201ENST00000600888 SGTAO43765 313 aa4.65□□□□□ -1.67
CKS1BP3-201ENST00000600888 POU2F2P09086 479 aa4.65□□□□□ -1.67
CKS1BP3-201ENST00000600888 C1SP09871 688 aa4.65□□□□□ -1.67
CKS1BP3-201ENST00000600888 ZSCAN20P17040 1043 aaPredicted RBP4.65□□□□□ -1.67
CKS1BP3-201ENST00000600888 ATP5JP18859 108 aa4.65□□□□□ -1.67
CKS1BP3-201ENST00000600888 PDCP20941 246 aa4.65□□□□□ -1.67
CKS1BP3-201ENST00000600888 MGAT1P26572 445 aa4.65□□□□□ -1.67
CKS1BP3-201ENST00000600888 PTTG1IPP53801 180 aa4.65□□□□□ -1.67
CKS1BP3-201ENST00000600888 EPHB1P54762 984 aa4.65□□□□□ -1.67
CKS1BP3-201ENST00000600888 TARDBPQ13148 414 aaKnown RBP eCLIP4.65□□□□□ -1.67
CKS1BP3-201ENST00000600888 RABL3Q5HYI8 236 aa4.65□□□□□ -1.67
CKS1BP3-201ENST00000600888 ATXN7L2Q5T6C5 722 aaPredicted RBP4.65□□□□□ -1.67
CKS1BP3-201ENST00000600888 PPP4R3AQ6IN85 833 aa4.65□□□□□ -1.67
CKS1BP3-201ENST00000600888 RSPH3Q86UC2 560 aa4.65□□□□□ -1.67
CKS1BP3-201ENST00000600888 SYT12Q8IV01 421 aa4.65□□□□□ -1.67
CKS1BP3-201ENST00000600888 PRR18Q8N4B5 295 aa4.65□□□□□ -1.67
CKS1BP3-201ENST00000600888 TCP11L2Q8N4U5 519 aa4.65□□□□□ -1.67
CKS1BP3-201ENST00000600888 OR10H5Q8NGA6 315 aa4.65□□□□□ -1.67
CKS1BP3-201ENST00000600888 KAT5Q92993 513 aa4.65□□□□□ -1.67
CKS1BP3-201ENST00000600888 RAB24Q969Q5 203 aa4.65□□□□□ -1.67
CKS1BP3-201ENST00000600888 ZNF503Q96F45 646 aa4.65□□□□□ -1.67
CKS1BP3-201ENST00000600888 PLEKHG4BQ96PX9 1271 aa4.65□□□□□ -1.67
CKS1BP3-201ENST00000600888 MYOCQ99972 504 aa4.65□□□□□ -1.67
CKS1BP3-201ENST00000600888 KRTAP9-3Q9BYQ3 159 aa4.65□□□□□ -1.67
CKS1BP3-201ENST00000600888 SLC12A5Q9H2X9 1139 aa4.65□□□□□ -1.67
CKS1BP3-201ENST00000600888 TERF2IPQ9NYB0 399 aa4.65□□□□□ -1.67
CKS1BP3-201ENST00000600888 FAM30AQ9NZY2 134 aa4.65□□□□□ -1.67
CKS1BP3-201ENST00000600888 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.65□□□□□ -1.67
CKS1BP3-201ENST00000600888 SLC23A1Q9UHI7 598 aa4.65□□□□□ -1.67
CKS1BP3-201ENST00000600888 ANKRD26Q9UPS8 1709 aa4.65□□□□□ -1.67
CKS1BP3-201ENST00000600888 WDR17Q8IZU2 1322 aa4.65□□□□□ -1.67
CKS1BP3-201ENST00000600888 RGPD2P0DJD1 1756 aa4.65□□□□□ -1.67
CKS1BP3-201ENST00000600888 A0A1W2PP64 1363 aa4.65□□□□□ -1.67
CKS1BP3-201ENST00000600888 ANKRD36BQ8N2N9 1353 aa4.65□□□□□ -1.67
CKS1BP3-201ENST00000600888 BCL9O00512 1426 aa4.64□□□□□ -1.67
CKS1BP3-201ENST00000600888 E2F8A0AVK6 867 aa4.64□□□□□ -1.67
CKS1BP3-201ENST00000600888 RECQL4O94761 1208 aa4.64□□□□□ -1.67
CKS1BP3-201ENST00000600888 POMCP01189 267 aa4.64□□□□□ -1.67
CKS1BP3-201ENST00000600888 RPLP2P05387 115 aaKnown RBP4.64□□□□□ -1.67
CKS1BP3-201ENST00000600888 PF4V1P10720 104 aa4.64□□□□□ -1.67
CKS1BP3-201ENST00000600888 VCAM1P19320 739 aa4.64□□□□□ -1.67
CKS1BP3-201ENST00000600888 TNFRSF1AP19438 455 aa4.64□□□□□ -1.67
CKS1BP3-201ENST00000600888 AKAP5P24588 427 aa4.64□□□□□ -1.67
CKS1BP3-201ENST00000600888 APOBEC3AP31941 199 aaPredicted RBP4.64□□□□□ -1.67
CKS1BP3-201ENST00000600888 CTXN1P60606 82 aa4.64□□□□□ -1.67
CKS1BP3-201ENST00000600888 RAP2BP61225 183 aa4.64□□□□□ -1.67
CKS1BP3-201ENST00000600888 TMF1P82094 1093 aa4.64□□□□□ -1.67
CKS1BP3-201ENST00000600888 DGCR2P98153 550 aa4.64□□□□□ -1.67
CKS1BP3-201ENST00000600888 SLC25A3Q00325 362 aa4.64□□□□□ -1.67
CKS1BP3-201ENST00000600888 DSC2Q02487 901 aa4.64□□□□□ -1.67
CKS1BP3-201ENST00000600888 NHLH2Q02577 135 aa4.64□□□□□ -1.67
CKS1BP3-201ENST00000600888 PIN1Q13526 163 aaPredicted RBP4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms