RNA–Protein interactions for RNA: ENST00000543982.5

XRCC1-202, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 2 BASIC

Gene XRCC1, Length 1,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-202ENST00000543982 LNX1Q8TBB1 728 aaPredicted RBP17.07■□□□□ 0.32
XRCC1-202ENST00000543982 HASPINQ8TF76 798 aa17.07■□□□□ 0.32
XRCC1-202ENST00000543982 ZMYND8Q9ULU4 1186 aaPredicted RBP17.07■□□□□ 0.32
XRCC1-202ENST00000543982 EPN1Q9Y6I3 576 aaPredicted RBP17.07■□□□□ 0.32
XRCC1-202ENST00000543982 A0A087X0T9 212 aa17.06■□□□□ 0.32
XRCC1-202ENST00000543982 I3L4J1 428 aa17.06■□□□□ 0.32
XRCC1-202ENST00000543982 DDX3XO00571 662 aaKnown RBP eCLIP17.06■□□□□ 0.321e-8■■■□□ 15.4
XRCC1-202ENST00000543982 CCDC175P0C221 793 aa17.06■□□□□ 0.32
XRCC1-202ENST00000543982 FAM228BP0C875 321 aa17.06■□□□□ 0.32
XRCC1-202ENST00000543982 FERP16591 822 aa17.06■□□□□ 0.32
XRCC1-202ENST00000543982 TBXAS1P24557 533 aaPredicted RBP17.06■□□□□ 0.32
XRCC1-202ENST00000543982 ZNF132P52740 706 aa17.06■□□□□ 0.32
XRCC1-202ENST00000543982 GFPT1Q06210 699 aaPredicted RBP17.06■□□□□ 0.32
XRCC1-202ENST00000543982 DSC1Q08554 894 aa17.06■□□□□ 0.32
XRCC1-202ENST00000543982 GRIK3Q13003 919 aa17.06■□□□□ 0.32
XRCC1-202ENST00000543982 PTPN14Q15678 1187 aa17.06■□□□□ 0.32
XRCC1-202ENST00000543982 TDRD12Q587J7 1177 aaKnown RBP17.06■□□□□ 0.32
XRCC1-202ENST00000543982 TAF3Q5VWG9 929 aa17.06■□□□□ 0.32
XRCC1-202ENST00000543982 ENOSF1Q7L5Y1 443 aa17.06■□□□□ 0.32
XRCC1-202ENST00000543982 REXO1L1PQ8IX06 675 aa17.06■□□□□ 0.32
XRCC1-202ENST00000543982 COLGALT2Q8IYK4 626 aa17.06■□□□□ 0.32
XRCC1-202ENST00000543982 TMEM199Q8N511 208 aa17.06■□□□□ 0.32
XRCC1-202ENST00000543982 DDX1Q92499 740 aaKnown RBP17.06■□□□□ 0.32
XRCC1-202ENST00000543982 MMS19Q96T76 1030 aa17.06■□□□□ 0.32
XRCC1-202ENST00000543982 PCDHB18PQ96TA0 734 aa17.06■□□□□ 0.32
XRCC1-202ENST00000543982 LPIN3Q9BQK8 851 aa17.06■□□□□ 0.32
XRCC1-202ENST00000543982 ELOVL4Q9GZR5 314 aa17.06■□□□□ 0.32
XRCC1-202ENST00000543982 SLC38A7Q9NVC3 462 aa17.06■□□□□ 0.32
XRCC1-202ENST00000543982 ADAMTS1Q9UHI8 967 aa17.06■□□□□ 0.32
XRCC1-202ENST00000543982 DAAM1Q9Y4D1 1078 aa17.06■□□□□ 0.32
XRCC1-202ENST00000543982 ADGRG1Q9Y653 693 aa17.06■□□□□ 0.32
XRCC1-202ENST00000543982 TTC3P53804 2025 aa17.06■□□□□ 0.32
XRCC1-202ENST00000543982 KPNA7A9QM74 516 aa17.06■□□□□ 0.32
XRCC1-202ENST00000543982 NDUFA10O95299 355 aa17.06■□□□□ 0.32
XRCC1-202ENST00000543982 TUSC3Q13454 348 aa17.06■□□□□ 0.32
XRCC1-202ENST00000543982 FAM117BQ6P1L5 589 aa17.06■□□□□ 0.32
XRCC1-202ENST00000543982 LIMS2Q7Z4I7 341 aa17.06■□□□□ 0.32
XRCC1-202ENST00000543982 RBBP8NLQ8NC74 664 aaPredicted RBP17.06■□□□□ 0.32
XRCC1-202ENST00000543982 EPS8L1Q8TE68 723 aa17.06■□□□□ 0.32
XRCC1-202ENST00000543982 NRDE2Q9H7Z3 1164 aa17.06■□□□□ 0.32
XRCC1-202ENST00000543982 IL23AQ9NPF7 189 aa17.06■□□□□ 0.32
XRCC1-202ENST00000543982 LRFN2Q9ULH4 789 aa17.06■□□□□ 0.32
XRCC1-202ENST00000543982 PDCD11Q14690 1871 aaKnown RBP17.05■□□□□ 0.32
XRCC1-202ENST00000543982 RCCD1A6NED2 376 aa17.05■□□□□ 0.32
XRCC1-202ENST00000543982 GOLGA6L9A6NEM1 432 aa17.05■□□□□ 0.32
XRCC1-202ENST00000543982 CCDC85CA6NKD9 419 aa17.05■□□□□ 0.32
XRCC1-202ENST00000543982 XPOTO43592 962 aaKnown RBP17.05■□□□□ 0.32
XRCC1-202ENST00000543982 CYP11B1P15538 503 aa17.05■□□□□ 0.32
XRCC1-202ENST00000543982 PBX3P40426 434 aa17.05■□□□□ 0.32
XRCC1-202ENST00000543982 KIF11P52732 1056 aa17.05■□□□□ 0.32
XRCC1-202ENST00000543982 WDR5P61964 334 aaKnown RBP17.05■□□□□ 0.32
XRCC1-202ENST00000543982 MYO1EQ12965 1108 aa17.05■□□□□ 0.32
XRCC1-202ENST00000543982 TIGD5Q53EQ6 642 aa17.05■□□□□ 0.32
XRCC1-202ENST00000543982 ZNF365Q70YC5 407 aa17.05■□□□□ 0.32
XRCC1-202ENST00000543982 NPAS4Q8IUM7 802 aa17.05■□□□□ 0.32
XRCC1-202ENST00000543982 GLYCTKQ8IVS8 523 aa17.05■□□□□ 0.32
XRCC1-202ENST00000543982 CCDC170Q8IYT3 715 aa17.05■□□□□ 0.32
XRCC1-202ENST00000543982 SLC30A5Q8TAD4 765 aa17.05■□□□□ 0.32
XRCC1-202ENST00000543982 KBTBD7Q8WVZ9 684 aa17.05■□□□□ 0.32
XRCC1-202ENST00000543982 TFAP2BQ92481 460 aa17.05■□□□□ 0.32
XRCC1-202ENST00000543982 CCDC42Q96M95 316 aa17.05■□□□□ 0.32
XRCC1-202ENST00000543982 TAS2R14Q9NYV8 317 aa17.05■□□□□ 0.32
XRCC1-202ENST00000543982 L1RE1Q9UN81 338 aa17.05■□□□□ 0.32
XRCC1-202ENST00000543982 SSU72P8A0A1W2PR75 194 aa17.04■□□□□ 0.32
XRCC1-202ENST00000543982 TBKBP1A7MCY6 615 aa17.04■□□□□ 0.32
XRCC1-202ENST00000543982 MMEP08473 750 aa17.04■□□□□ 0.32
XRCC1-202ENST00000543982 TNNT1P13805 278 aa17.04■□□□□ 0.32
XRCC1-202ENST00000543982 BRCC3P46736 316 aa17.04■□□□□ 0.32
XRCC1-202ENST00000543982 TAF6P49848 677 aa17.04■□□□□ 0.32
XRCC1-202ENST00000543982 CDR1P51861 262 aa17.04■□□□□ 0.32
XRCC1-202ENST00000543982 RAD23BP54727 409 aa17.04■□□□□ 0.32
XRCC1-202ENST00000543982 OSTM1Q86WC4 334 aa17.04■□□□□ 0.32
XRCC1-202ENST00000543982 GDAP2Q9NXN4 497 aa17.04■□□□□ 0.32
XRCC1-202ENST00000543982 CXXC1Q9P0U4 656 aaPredicted RBP17.04■□□□□ 0.32
XRCC1-202ENST00000543982 NENFQ9UMX5 172 aa17.04■□□□□ 0.32
XRCC1-202ENST00000543982 R3HCC1Q9Y3T6 440 aaKnown RBP17.04■□□□□ 0.32
XRCC1-202ENST00000543982 TIMM13Q9Y5L4 95 aaPredicted RBP17.04■□□□□ 0.32
XRCC1-202ENST00000543982 ABHD14A-ACY1A0A1B0GW23 586 aa17.04■□□□□ 0.32
XRCC1-202ENST00000543982 CILPO75339 1184 aa17.04■□□□□ 0.32
XRCC1-202ENST00000543982 B3GAT3O94766 335 aa17.04■□□□□ 0.32
XRCC1-202ENST00000543982 KIF4AO95239 1232 aa17.04■□□□□ 0.32
XRCC1-202ENST00000543982 LMO2P25791 158 aa17.04■□□□□ 0.32
XRCC1-202ENST00000543982 NDST1P52848 882 aa17.04■□□□□ 0.32
XRCC1-202ENST00000543982 TNNC1P63316 161 aa17.04■□□□□ 0.32
XRCC1-202ENST00000543982 CCDC142Q17RM4 750 aa17.04■□□□□ 0.32
XRCC1-202ENST00000543982 RPUSD2Q8IZ73 545 aaKnown RBP17.04■□□□□ 0.32
XRCC1-202ENST00000543982 TOP1MTQ969P6 601 aa17.04■□□□□ 0.32
XRCC1-202ENST00000543982 JAKMIP2Q96AA8 810 aa17.04■□□□□ 0.32
XRCC1-202ENST00000543982 AGPAT1Q99943 283 aa17.04■□□□□ 0.32
XRCC1-202ENST00000543982 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.04■□□□□ 0.32
XRCC1-202ENST00000543982 COL4A6Q14031 1691 aa17.03■□□□□ 0.32
XRCC1-202ENST00000543982 KIF2AO00139 706 aaPredicted RBP17.03■□□□□ 0.32
XRCC1-202ENST00000543982 DGKIO75912 1065 aa17.03■□□□□ 0.32
XRCC1-202ENST00000543982 RPL9P32969 192 aaKnown RBP17.03■□□□□ 0.32
XRCC1-202ENST00000543982 CYLC1P35663 651 aaPredicted RBP17.03■□□□□ 0.32
XRCC1-202ENST00000543982 AARSP49588 968 aaKnown RBP eCLIP17.03■□□□□ 0.32
XRCC1-202ENST00000543982 FMO1Q01740 532 aa17.03■□□□□ 0.32
XRCC1-202ENST00000543982 WSCD1Q658N2 575 aa17.03■□□□□ 0.32
XRCC1-202ENST00000543982 PDCL2Q8N4E4 241 aa17.03■□□□□ 0.32
XRCC1-202ENST00000543982 SLC4A11Q8NBS3 891 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms