RNA–Protein interactions for RNA: ENST00000542815.7

ZEB1-208, Transcript of zinc finger E-box binding homeobox 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ZEB1, Length 3,217 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-208ENST00000542815 CDCA2Q69YH5 1023 aaPredicted RBP5.55□□□□□ -1.52
ZEB1-208ENST00000542815 KCNT2Q6UVM3 1135 aa5.55□□□□□ -1.52
ZEB1-208ENST00000542815 CCNI2Q6ZMN8 369 aaPredicted RBP5.55□□□□□ -1.52
ZEB1-208ENST00000542815 UNC13DQ70J99 1090 aa5.55□□□□□ -1.52
ZEB1-208ENST00000542815 RRAGAQ7L523 313 aa5.55□□□□□ -1.52
ZEB1-208ENST00000542815 C4orf19Q8IY42 314 aa5.55□□□□□ -1.52
ZEB1-208ENST00000542815 ZNF687Q8N1G0 1237 aa5.55□□□□□ -1.52
ZEB1-208ENST00000542815 GUF1Q8N442 669 aaKnown RBP5.55□□□□□ -1.52
ZEB1-208ENST00000542815 KIAA1958Q8N8K9 716 aa5.55□□□□□ -1.52
ZEB1-208ENST00000542815 COG1Q8WTW3 980 aa5.55□□□□□ -1.52
ZEB1-208ENST00000542815 LARP4BQ92615 738 aaKnown RBP5.55□□□□□ -1.52
ZEB1-208ENST00000542815 SH3GL3Q99963 347 aa5.55□□□□□ -1.52
ZEB1-208ENST00000542815 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP5.55□□□□□ -1.52
ZEB1-208ENST00000542815 CHST7Q9NS84 486 aa5.55□□□□□ -1.52
ZEB1-208ENST00000542815 NRBP2Q9NSY0 501 aa5.55□□□□□ -1.52
ZEB1-208ENST00000542815 VAV3Q9UKW4 847 aa5.55□□□□□ -1.52
ZEB1-208ENST00000542815 PCDHA13Q9Y5I0 950 aa5.55□□□□□ -1.52
ZEB1-208ENST00000542815 IPO5O00410 1097 aaKnown RBP5.55□□□□□ -1.52
ZEB1-208ENST00000542815 AOC1P19801 751 aa5.55□□□□□ -1.52
ZEB1-208ENST00000542815 PAX3P23760 479 aa5.55□□□□□ -1.52
ZEB1-208ENST00000542815 CORO7P57737 925 aa5.55□□□□□ -1.52
ZEB1-208ENST00000542815 STARD6P59095 220 aa5.55□□□□□ -1.52
ZEB1-208ENST00000542815 ERVFC1P60507 584 aa5.55□□□□□ -1.52
ZEB1-208ENST00000542815 COBLL1Q53SF7 1204 aa5.55□□□□□ -1.52
ZEB1-208ENST00000542815 UBXN11Q5T124 520 aa5.55□□□□□ -1.52
ZEB1-208ENST00000542815 PGBD4Q96DM1 585 aa5.55□□□□□ -1.52
ZEB1-208ENST00000542815 RUFY1Q96T51 708 aa5.55□□□□□ -1.52
ZEB1-208ENST00000542815 EDEM3Q9BZQ6 932 aa5.55□□□□□ -1.52
ZEB1-208ENST00000542815 RNF39Q9H2S5 420 aa5.55□□□□□ -1.52
ZEB1-208ENST00000542815 CERS4Q9HA82 394 aa5.55□□□□□ -1.52
ZEB1-208ENST00000542815 RAPGEFL1Q9UHV5 662 aa5.55□□□□□ -1.52
ZEB1-208ENST00000542815 TFR2Q9UP52 801 aa5.55□□□□□ -1.52
ZEB1-208ENST00000542815 DUSP10Q9Y6W6 482 aa5.55□□□□□ -1.52
ZEB1-208ENST00000542815 LRRIQ3A6PVS8 624 aaPredicted RBP5.54□□□□□ -1.52
ZEB1-208ENST00000542815 SSBP05455 408 aaKnown RBP eCLIP5.54□□□□□ -1.52
ZEB1-208ENST00000542815 HNRNPH3P31942 346 aaKnown RBP5.54□□□□□ -1.52
ZEB1-208ENST00000542815 EIF4A3P38919 411 aaKnown RBP5.54□□□□□ -1.52
ZEB1-208ENST00000542815 MATR3P43243 847 aaKnown RBP eCLIP5.54□□□□□ -1.523e-6■■■□□ 19
ZEB1-208ENST00000542815 KLK7P49862 253 aa5.54□□□□□ -1.52
ZEB1-208ENST00000542815 FKBP3Q00688 224 aaKnown RBP5.54□□□□□ -1.52
ZEB1-208ENST00000542815 CCDC40Q4G0X9 1142 aa5.54□□□□□ -1.52
ZEB1-208ENST00000542815 XKR4Q5GH76 650 aa5.54□□□□□ -1.52
ZEB1-208ENST00000542815 LILRA6Q6PI73 481 aa5.54□□□□□ -1.52
ZEB1-208ENST00000542815 SDCCAG8Q86SQ7 713 aaPredicted RBP5.54□□□□□ -1.52
ZEB1-208ENST00000542815 DRAXINQ8NBI3 349 aaPredicted RBP5.54□□□□□ -1.52
ZEB1-208ENST00000542815 SNX29Q8TEQ0 813 aa5.54□□□□□ -1.52
ZEB1-208ENST00000542815 IGSF21Q96ID5 467 aa5.54□□□□□ -1.52
ZEB1-208ENST00000542815 NOX5Q96PH1 765 aa5.54□□□□□ -1.52
ZEB1-208ENST00000542815 VN1R3Q9BXE9 311 aa5.54□□□□□ -1.52
ZEB1-208ENST00000542815 TTYH3Q9C0H2 523 aa5.54□□□□□ -1.52
ZEB1-208ENST00000542815 FAM204AQ9H8W3 233 aa5.54□□□□□ -1.52
ZEB1-208ENST00000542815 MUTYHQ9UIF7 546 aa5.54□□□□□ -1.52
ZEB1-208ENST00000542815 FBXO4Q9UKT5 387 aa5.54□□□□□ -1.52
ZEB1-208ENST00000542815 SNX12Q9UMY4 172 aa5.54□□□□□ -1.52
ZEB1-208ENST00000542815 GOLGA6BA6NDN3 693 aa5.54□□□□□ -1.52
ZEB1-208ENST00000542815 SOBPA7XYQ1 873 aa5.54□□□□□ -1.52
ZEB1-208ENST00000542815 ZNF862O60290 1169 aa5.54□□□□□ -1.52
ZEB1-208ENST00000542815 OPA1O60313 960 aa5.54□□□□□ -1.52
ZEB1-208ENST00000542815 RNF40O75150 1001 aa5.54□□□□□ -1.52
ZEB1-208ENST00000542815 ZMYND10O75800 440 aa5.54□□□□□ -1.52
ZEB1-208ENST00000542815 HNRNPA1P09651 372 aaKnown RBP eCLIP5.54□□□□□ -1.52
ZEB1-208ENST00000542815 TDGF1P13385 188 aa5.54□□□□□ -1.52
ZEB1-208ENST00000542815 TMOD1P28289 359 aa5.54□□□□□ -1.52
ZEB1-208ENST00000542815 CA8P35219 290 aa5.54□□□□□ -1.52
ZEB1-208ENST00000542815 FXR2P51116 673 aaKnown RBP eCLIP5.54□□□□□ -1.52
ZEB1-208ENST00000542815 KIF11P52732 1056 aa5.54□□□□□ -1.52
ZEB1-208ENST00000542815 DSG1Q02413 1049 aa5.54□□□□□ -1.52
ZEB1-208ENST00000542815 SPIRE1Q08AE8 756 aa5.54□□□□□ -1.52
ZEB1-208ENST00000542815 TDRD12Q587J7 1177 aaKnown RBP5.54□□□□□ -1.52
ZEB1-208ENST00000542815 MIIPQ5JXC2 388 aa5.54□□□□□ -1.52
ZEB1-208ENST00000542815 KIAA0319Q5VV43 1072 aa5.54□□□□□ -1.52
ZEB1-208ENST00000542815 ELMSAN1Q6PJG2 1045 aa5.54□□□□□ -1.52
ZEB1-208ENST00000542815 RNF10Q8N5U6 811 aaKnown RBP5.54□□□□□ -1.52
ZEB1-208ENST00000542815 DDX12PQ92771 950 aa5.54□□□□□ -1.52
ZEB1-208ENST00000542815 GLG1Q92896 1179 aa5.54□□□□□ -1.52
ZEB1-208ENST00000542815 GDAP1L1Q96MZ0 367 aa5.54□□□□□ -1.52
ZEB1-208ENST00000542815 ADAM2Q99965 735 aa5.54□□□□□ -1.52
ZEB1-208ENST00000542815 OXCT2Q9BYC2 517 aaPredicted RBP5.54□□□□□ -1.52
ZEB1-208ENST00000542815 NT5C3AQ9H0P0 336 aa5.54□□□□□ -1.52
ZEB1-208ENST00000542815 TLE6Q9H808 572 aa5.54□□□□□ -1.52
ZEB1-208ENST00000542815 PRMT8Q9NR22 394 aaPredicted RBP5.54□□□□□ -1.52
ZEB1-208ENST00000542815 HOMER3Q9NSC5 361 aa5.54□□□□□ -1.52
ZEB1-208ENST00000542815 RNF14Q9UBS8 474 aa5.54□□□□□ -1.52
ZEB1-208ENST00000542815 PCDHA12Q9UN75 941 aa5.54□□□□□ -1.52
ZEB1-208ENST00000542815 RRP15Q9Y3B9 282 aaKnown RBP5.54□□□□□ -1.52
ZEB1-208ENST00000542815 PTPRDP23468 1912 aa5.54□□□□□ -1.52
ZEB1-208ENST00000542815 RCCD1A6NED2 376 aa5.53□□□□□ -1.52
ZEB1-208ENST00000542815 MYMKA6NI61 221 aa5.53□□□□□ -1.52
ZEB1-208ENST00000542815 ZNF185O15231 689 aa5.53□□□□□ -1.52
ZEB1-208ENST00000542815 MSH4O15457 936 aa5.53□□□□□ -1.52
ZEB1-208ENST00000542815 GNA14O95837 355 aa5.53□□□□□ -1.52
ZEB1-208ENST00000542815 PAX7P23759 505 aa5.53□□□□□ -1.52
ZEB1-208ENST00000542815 NRIP1P48552 1158 aa5.53□□□□□ -1.52
ZEB1-208ENST00000542815 AARSP49588 968 aaKnown RBP eCLIP5.53□□□□□ -1.52
ZEB1-208ENST00000542815 KRT17Q04695 432 aa5.53□□□□□ -1.52
ZEB1-208ENST00000542815 CFAP221Q4G0U5 840 aa5.53□□□□□ -1.52
ZEB1-208ENST00000542815 HPS3Q969F9 1004 aa5.53□□□□□ -1.52
ZEB1-208ENST00000542815 MIEF2Q96C03 454 aa5.53□□□□□ -1.52
ZEB1-208ENST00000542815 ANKEF1Q9NU02 776 aa5.53□□□□□ -1.52
ZEB1-208ENST00000542815 TYW1Q9NV66 732 aaKnown RBP5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms