RNA–Protein interactions for RNA: ENST00000536079.5

DDX55-204, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 765 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-204ENST00000536079 TYMPP19971 482 aa19.25■□□□□ 0.67
DDX55-204ENST00000536079 ARPP19P56211 112 aa19.25■□□□□ 0.67
DDX55-204ENST00000536079 PAK1Q13153 545 aa19.25■□□□□ 0.67
DDX55-204ENST00000536079 SV2CQ496J9 727 aa19.25■□□□□ 0.67
DDX55-204ENST00000536079 SLC8B1Q6J4K2 584 aa19.25■□□□□ 0.67
DDX55-204ENST00000536079 C15orf39Q6ZRI6 1047 aa19.25■□□□□ 0.67
DDX55-204ENST00000536079 SV2AQ7L0J3 742 aa19.25■□□□□ 0.67
DDX55-204ENST00000536079 PPFIBP1Q86W92 1011 aa19.25■□□□□ 0.67
DDX55-204ENST00000536079 OSTM1Q86WC4 334 aa19.25■□□□□ 0.67
DDX55-204ENST00000536079 SMRP1Q8NCR6 262 aa19.25■□□□□ 0.67
DDX55-204ENST00000536079 OR10T2Q8NGX3 314 aa19.25■□□□□ 0.67
DDX55-204ENST00000536079 HPDLQ96IR7 371 aa19.25■□□□□ 0.67
DDX55-204ENST00000536079 ZNF560Q96MR9 790 aa19.25■□□□□ 0.67
DDX55-204ENST00000536079 XYLT2Q9H1B5 865 aa19.25■□□□□ 0.67
DDX55-204ENST00000536079 TMEM63CQ9P1W3 806 aa19.25■□□□□ 0.67
DDX55-204ENST00000536079 WDR27A2RRH5 827 aa19.24■□□□□ 0.67
DDX55-204ENST00000536079 MBTPS2O43462 519 aa19.24■□□□□ 0.67
DDX55-204ENST00000536079 RFPL2O75678 378 aa19.24■□□□□ 0.67
DDX55-204ENST00000536079 VNN2O95498 520 aa19.24■□□□□ 0.67
DDX55-204ENST00000536079 ODC1P11926 461 aa19.24■□□□□ 0.67
DDX55-204ENST00000536079 PNPLA4P41247 253 aa19.24■□□□□ 0.67
DDX55-204ENST00000536079 GCLMP48507 274 aa19.24■□□□□ 0.67
DDX55-204ENST00000536079 NLRP12P59046 1061 aa19.24■□□□□ 0.67
DDX55-204ENST00000536079 ROR1Q01973 937 aa19.24■□□□□ 0.67
DDX55-204ENST00000536079 CREMQ03060 361 aa19.24■□□□□ 0.67
DDX55-204ENST00000536079 YWHAHQ04917 246 aaPredicted RBP19.24■□□□□ 0.67
DDX55-204ENST00000536079 ZACNQ401N2 412 aa19.24■□□□□ 0.67
DDX55-204ENST00000536079 RARS2Q5T160 578 aaKnown RBP19.24■□□□□ 0.67
DDX55-204ENST00000536079 OVOS1Q6IE37 1185 aa19.24■□□□□ 0.67
DDX55-204ENST00000536079 PDXDC1Q6P996 788 aa19.24■□□□□ 0.67
DDX55-204ENST00000536079 INTS8Q75QN2 995 aaKnown RBP19.24■□□□□ 0.67
DDX55-204ENST00000536079 PDCL2Q8N4E4 241 aa19.24■□□□□ 0.67
DDX55-204ENST00000536079 MKNK1Q9BUB5 465 aa19.24■□□□□ 0.67
DDX55-204ENST00000536079 MMRN2Q9H8L6 949 aa19.24■□□□□ 0.67
DDX55-204ENST00000536079 GDAP2Q9NXN4 497 aa19.24■□□□□ 0.67
DDX55-204ENST00000536079 POLIQ9UNA4 740 aa19.24■□□□□ 0.67
DDX55-204ENST00000536079 SNX9Q9Y5X1 595 aa19.24■□□□□ 0.67
DDX55-204ENST00000536079 TSC2P49815 1807 aa19.23■□□□□ 0.67
DDX55-204ENST00000536079 C5orf42Q9H799 3197 aa19.23■□□□□ 0.67
DDX55-204ENST00000536079 H7C4K7 107 aa19.23■□□□□ 0.67
DDX55-204ENST00000536079 MBD3O95983 291 aa19.23■□□□□ 0.67
DDX55-204ENST00000536079 EPB41P11171 864 aaKnown RBP19.23■□□□□ 0.67
DDX55-204ENST00000536079 PPP1R2P41236 205 aa19.23■□□□□ 0.67
DDX55-204ENST00000536079 BIRC3Q13489 604 aa19.23■□□□□ 0.67
DDX55-204ENST00000536079 SOWAHAQ2M3V2 549 aa19.23■□□□□ 0.67
DDX55-204ENST00000536079 PTCRAQ6ISU1 281 aaPredicted RBP19.23■□□□□ 0.67
DDX55-204ENST00000536079 ZNF280DQ6N043 979 aa19.23■□□□□ 0.67
DDX55-204ENST00000536079 TMC5Q6UXY8 1006 aa19.23■□□□□ 0.67
DDX55-204ENST00000536079 LIMS2Q7Z4I7 341 aa19.23■□□□□ 0.67
DDX55-204ENST00000536079 KREMEN2Q8NCW0 462 aa19.23■□□□□ 0.67
DDX55-204ENST00000536079 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.23■□□□□ 0.671e-6■■■■■ 105.2
DDX55-204ENST00000536079 FBXW11Q9UKB1 542 aa19.23■□□□□ 0.67
DDX55-204ENST00000536079 NME7Q9Y5B8 376 aa19.23■□□□□ 0.67
DDX55-204ENST00000536079 IKBKBO14920 756 aa19.22■□□□□ 0.67
DDX55-204ENST00000536079 SLC16A3O15427 465 aaKnown RBP19.22■□□□□ 0.67
DDX55-204ENST00000536079 PHACTR2O75167 634 aa19.22■□□□□ 0.67
DDX55-204ENST00000536079 ABLIM3O94929 683 aa19.22■□□□□ 0.67
DDX55-204ENST00000536079 SEC24AO95486 1093 aa19.22■□□□□ 0.67
DDX55-204ENST00000536079 KRT13P13646 458 aa19.22■□□□□ 0.67
DDX55-204ENST00000536079 PAX3P23760 479 aa19.22■□□□□ 0.67
DDX55-204ENST00000536079 NCOA4Q13772 614 aa19.22■□□□□ 0.67
DDX55-204ENST00000536079 CCDC142Q17RM4 750 aa19.22■□□□□ 0.67
DDX55-204ENST00000536079 SPOPLQ6IQ16 392 aa19.22■□□□□ 0.67
DDX55-204ENST00000536079 RNF19BQ6ZMZ0 732 aa19.22■□□□□ 0.67
DDX55-204ENST00000536079 FILIP1Q7Z7B0 1213 aa19.22■□□□□ 0.67
DDX55-204ENST00000536079 USP37Q86T82 979 aa19.22■□□□□ 0.67
DDX55-204ENST00000536079 LRRTM3Q86VH5 581 aa19.22■□□□□ 0.67
DDX55-204ENST00000536079 MLKLQ8NB16 471 aa19.22■□□□□ 0.67
DDX55-204ENST00000536079 KBTBD7Q8WVZ9 684 aa19.22■□□□□ 0.67
DDX55-204ENST00000536079 SEMA4DQ92854 862 aa19.22■□□□□ 0.67
DDX55-204ENST00000536079 CEP63Q96MT8 703 aa19.22■□□□□ 0.67
DDX55-204ENST00000536079 NECAB3Q96P71 396 aaPredicted RBP19.22■□□□□ 0.67
DDX55-204ENST00000536079 PI4K2AQ9BTU6 479 aa19.22■□□□□ 0.67
DDX55-204ENST00000536079 SRRTQ9BXP5 876 aaKnown RBP19.22■□□□□ 0.67
DDX55-204ENST00000536079 RWDD2AQ9UIY3 292 aa19.22■□□□□ 0.67
DDX55-204ENST00000536079 USP15Q9Y4E8 981 aaPredicted RBP19.22■□□□□ 0.67
DDX55-204ENST00000536079 BICDL2A1A5D9 508 aa19.21■□□□□ 0.67
DDX55-204ENST00000536079 FSD2A1L4K1 749 aa19.21■□□□□ 0.67
DDX55-204ENST00000536079 HLA-DRAP01903 254 aa19.21■□□□□ 0.67
DDX55-204ENST00000536079 AP3M2P53677 418 aa19.21■□□□□ 0.67
DDX55-204ENST00000536079 MYO1EQ12965 1108 aa19.21■□□□□ 0.67
DDX55-204ENST00000536079 SMAD4Q13485 552 aaKnown RBP19.21■□□□□ 0.67
DDX55-204ENST00000536079 TRPC3Q13507 836 aa19.21■□□□□ 0.67
DDX55-204ENST00000536079 FOXR2Q6PJQ5 311 aa19.21■□□□□ 0.67
DDX55-204ENST00000536079 TAS1R2Q8TE23 839 aa19.21■□□□□ 0.67
DDX55-204ENST00000536079 SUSD6Q92537 303 aa19.21■□□□□ 0.67
DDX55-204ENST00000536079 ZNF707Q96C28 371 aaPredicted RBP19.21■□□□□ 0.67
DDX55-204ENST00000536079 MRPL45Q9BRJ2 306 aaKnown RBP19.21■□□□□ 0.67
DDX55-204ENST00000536079 SDCBP2Q9H190 292 aa19.21■□□□□ 0.67
DDX55-204ENST00000536079 CRISPLD1Q9H336 500 aa19.21■□□□□ 0.67
DDX55-204ENST00000536079 DZANK1Q9NVP4 752 aa19.21■□□□□ 0.67
DDX55-204ENST00000536079 VCANP13611 3396 aa19.2■□□□□ 0.66
DDX55-204ENST00000536079 HUS1O60921 280 aa19.2■□□□□ 0.66
DDX55-204ENST00000536079 SRGAP2BP0DMP2 458 aa19.2■□□□□ 0.66
DDX55-204ENST00000536079 HOXB8P17481 243 aaPredicted RBP19.2■□□□□ 0.66
DDX55-204ENST00000536079 ACAT1P24752 427 aaKnown RBP19.2■□□□□ 0.66
DDX55-204ENST00000536079 ENPEPQ07075 957 aa19.2■□□□□ 0.66
DDX55-204ENST00000536079 WDR72Q3MJ13 1102 aa19.2■□□□□ 0.66
DDX55-204ENST00000536079 CBWD6Q4V339 395 aa19.2■□□□□ 0.66
DDX55-204ENST00000536079 DCAF17Q5H9S7 520 aaPredicted RBP19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 106.6 ms