RNA–Protein interactions for RNA: ENST00000522912.5

SREK1-212, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best)

Gene SREK1, Length 2,047 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-212ENST00000522912 PCBP1Q15365 356 aaKnown RBP eCLIP17.94■□□□□ 0.46
SREK1-212ENST00000522912 SMYD5Q6GMV2 418 aa17.94■□□□□ 0.46
SREK1-212ENST00000522912 AADACL2Q6P093 401 aa17.94■□□□□ 0.46
SREK1-212ENST00000522912 CD302Q8IX05 232 aa17.94■□□□□ 0.46
SREK1-212ENST00000522912 UBL4BQ8N7F7 174 aa17.94■□□□□ 0.46
SREK1-212ENST00000522912 C7orf31Q8N865 590 aa17.94■□□□□ 0.46
SREK1-212ENST00000522912 HPDLQ96IR7 371 aa17.94■□□□□ 0.46
SREK1-212ENST00000522912 FAXDC2Q96IV6 333 aa17.94■□□□□ 0.46
SREK1-212ENST00000522912 PLEKHA4Q9H4M7 779 aa17.94■□□□□ 0.46
SREK1-212ENST00000522912 ITGA11Q9UKX5 1188 aa17.94■□□□□ 0.46
SREK1-212ENST00000522912 HES2Q9Y543 173 aa17.94■□□□□ 0.46
SREK1-212ENST00000522912 PDCD11Q14690 1871 aaKnown RBP17.94■□□□□ 0.46
SREK1-212ENST00000522912 SCN1AP35498 2009 aa17.94■□□□□ 0.46
SREK1-212ENST00000522912 KRIT1O00522 736 aa17.94■□□□□ 0.46
SREK1-212ENST00000522912 RAD51CO43502 376 aa17.94■□□□□ 0.46
SREK1-212ENST00000522912 SPOPO43791 374 aa17.94■□□□□ 0.46
SREK1-212ENST00000522912 AOC2O75106 756 aa17.94■□□□□ 0.46
SREK1-212ENST00000522912 PGK1P00558 417 aa17.94■□□□□ 0.46
SREK1-212ENST00000522912 RAD23BP54727 409 aa17.94■□□□□ 0.46
SREK1-212ENST00000522912 PRKCZQ05513 592 aa17.94■□□□□ 0.46
SREK1-212ENST00000522912 C1QBPQ07021 282 aaKnown RBP17.94■□□□□ 0.46
SREK1-212ENST00000522912 GNASQ5JWF2 1037 aa17.94■□□□□ 0.46
SREK1-212ENST00000522912 LIN9Q5TKA1 542 aa17.94■□□□□ 0.46
SREK1-212ENST00000522912 NT5DC4Q86YG4 428 aa17.94■□□□□ 0.46
SREK1-212ENST00000522912 WHAMMQ8TF30 809 aa17.94■□□□□ 0.46
SREK1-212ENST00000522912 ZMAT2Q96NC0 199 aaKnown RBP17.94■□□□□ 0.46
SREK1-212ENST00000522912 PLEKHA5Q9HAU0 1116 aa17.94■□□□□ 0.46
SREK1-212ENST00000522912 PCDHGC3Q9UN70 934 aa17.94■□□□□ 0.46
SREK1-212ENST00000522912 NR2E1Q9Y466 385 aa17.94■□□□□ 0.46
SREK1-212ENST00000522912 ALDH1A1P00352 501 aa17.93■□□□□ 0.46
SREK1-212ENST00000522912 GNAT1P11488 350 aa17.93■□□□□ 0.46
SREK1-212ENST00000522912 CTNNA2P26232 953 aa17.93■□□□□ 0.46
SREK1-212ENST00000522912 CTNNA1P35221 906 aaKnown RBP17.93■□□□□ 0.46
SREK1-212ENST00000522912 RBP5P82980 135 aa17.93■□□□□ 0.46
SREK1-212ENST00000522912 PLEKHA7Q6IQ23 1121 aa17.93■□□□□ 0.46
SREK1-212ENST00000522912 HDXQ7Z353 690 aa17.93■□□□□ 0.46
SREK1-212ENST00000522912 APBB1IPQ7Z5R6 666 aaPredicted RBP17.93■□□□□ 0.46
SREK1-212ENST00000522912 WDTC1Q8N5D0 677 aa17.93■□□□□ 0.46
SREK1-212ENST00000522912 C1orf131Q8NDD1 294 aaKnown RBP17.93■□□□□ 0.46
SREK1-212ENST00000522912 SNX27Q96L92 541 aa17.93■□□□□ 0.46
SREK1-212ENST00000522912 TWNKQ96RR1 684 aa17.93■□□□□ 0.46
SREK1-212ENST00000522912 UPF3AQ9H1J1 476 aaKnown RBP17.93■□□□□ 0.46
SREK1-212ENST00000522912 NXF3Q9H4D5 531 aaKnown RBP17.93■□□□□ 0.46
SREK1-212ENST00000522912 HMGXB4Q9UGU5 601 aa17.93■□□□□ 0.46
SREK1-212ENST00000522912 PCDHA3Q9Y5H8 950 aa17.93■□□□□ 0.46
SREK1-212ENST00000522912 ZSCAN5CA6NGD5 496 aaPredicted RBP17.93■□□□□ 0.46
SREK1-212ENST00000522912 KPNA6O60684 536 aa17.93■□□□□ 0.46
SREK1-212ENST00000522912 LSM8O95777 96 aaKnown RBP17.93■□□□□ 0.46
SREK1-212ENST00000522912 MMP8P22894 467 aa17.93■□□□□ 0.46
SREK1-212ENST00000522912 AXLP30530 894 aa17.93■□□□□ 0.46
SREK1-212ENST00000522912 CRYBB1P53674 252 aaPredicted RBP17.93■□□□□ 0.46
SREK1-212ENST00000522912 ORC1Q13415 861 aa17.93■□□□□ 0.46
SREK1-212ENST00000522912 MAMLD1Q13495 774 aa17.93■□□□□ 0.46
SREK1-212ENST00000522912 PPP1R2P3Q6NXS1 205 aa17.93■□□□□ 0.46
SREK1-212ENST00000522912 CXCL17Q6UXB2 119 aa17.93■□□□□ 0.46
SREK1-212ENST00000522912 KRT222Q8N1A0 295 aa17.93■□□□□ 0.46
SREK1-212ENST00000522912 UBE2Q2Q8WVN8 375 aa17.93■□□□□ 0.46
SREK1-212ENST00000522912 MTG1Q9BT17 334 aaPredicted RBP17.93■□□□□ 0.46
SREK1-212ENST00000522912 DDX47Q9H0S4 455 aaKnown RBP17.93■□□□□ 0.46
SREK1-212ENST00000522912 PIN4Q9Y237 131 aaKnown RBP17.93■□□□□ 0.46
SREK1-212ENST00000522912 CCDC188H7C350 402 aa17.92■□□□□ 0.46
SREK1-212ENST00000522912 CILPO75339 1184 aa17.92■□□□□ 0.46
SREK1-212ENST00000522912 HEXIM1O94992 359 aaKnown RBP17.92■□□□□ 0.46
SREK1-212ENST00000522912 CDH5P33151 784 aaPredicted RBP17.92■□□□□ 0.46
SREK1-212ENST00000522912 CACNB2Q08289 660 aaPredicted RBP17.92■□□□□ 0.46
SREK1-212ENST00000522912 ZBTB6Q15916 424 aa17.92■□□□□ 0.46
SREK1-212ENST00000522912 MAP9Q49MG5 647 aa17.92■□□□□ 0.46
SREK1-212ENST00000522912 ALKAL1Q6UXT8 129 aa17.92■□□□□ 0.46
SREK1-212ENST00000522912 NME8Q8N427 588 aa17.92■□□□□ 0.46
SREK1-212ENST00000522912 SLC4A11Q8NBS3 891 aa17.92■□□□□ 0.46
SREK1-212ENST00000522912 ELOVL4Q9GZR5 314 aa17.92■□□□□ 0.46
SREK1-212ENST00000522912 CYP3A43Q9HB55 503 aa17.92■□□□□ 0.46
SREK1-212ENST00000522912 GDF3Q9NR23 364 aa17.92■□□□□ 0.46
SREK1-212ENST00000522912 DERAQ9Y315 318 aa17.92■□□□□ 0.46
SREK1-212ENST00000522912 CASP8AP2Q9UKL3 1982 aa17.92■□□□□ 0.46
SREK1-212ENST00000522912 CCDC66A2RUB6 948 aa17.91■□□□□ 0.46
SREK1-212ENST00000522912 SART1O43290 800 aaKnown RBP17.91■□□□□ 0.46
SREK1-212ENST00000522912 RECQL4O94761 1208 aa17.91■□□□□ 0.46
SREK1-212ENST00000522912 GJB6O95452 261 aa17.91■□□□□ 0.46
SREK1-212ENST00000522912 STAU1O95793 577 aaKnown RBP17.91■□□□□ 0.46
SREK1-212ENST00000522912 PYGMP11217 842 aa17.91■□□□□ 0.46
SREK1-212ENST00000522912 CD19P15391 556 aa17.91■□□□□ 0.46
SREK1-212ENST00000522912 TNFRSF8P28908 595 aa17.91■□□□□ 0.46
SREK1-212ENST00000522912 CASP8Q14790 479 aa17.91■□□□□ 0.46
SREK1-212ENST00000522912 NBPF20Q3BBV1 942 aa17.91■□□□□ 0.46
SREK1-212ENST00000522912 UBXN11Q5T124 520 aa17.91■□□□□ 0.46
SREK1-212ENST00000522912 DENND1BQ6P3S1 775 aa17.91■□□□□ 0.46
SREK1-212ENST00000522912 TMEM35BQ8NCS4 154 aa17.91■□□□□ 0.46
SREK1-212ENST00000522912 AENQ8WTP8 325 aaKnown RBP17.91■□□□□ 0.46
SREK1-212ENST00000522912 RNF19AQ9NV58 838 aa17.91■□□□□ 0.46
SREK1-212ENST00000522912 MYO1FO00160 1098 aa17.91■□□□□ 0.46
SREK1-212ENST00000522912 PPEF2O14830 753 aa17.91■□□□□ 0.46
SREK1-212ENST00000522912 SEPT4O43236 478 aa17.91■□□□□ 0.46
SREK1-212ENST00000522912 PAEPP09466 180 aa17.91■□□□□ 0.46
SREK1-212ENST00000522912 GUCY2DQ02846 1103 aa17.91■□□□□ 0.46
SREK1-212ENST00000522912 ADAT2Q7Z6V5 191 aaKnown RBP17.91■□□□□ 0.46
SREK1-212ENST00000522912 C18orf25Q96B23 403 aaPredicted RBP17.91■□□□□ 0.46
SREK1-212ENST00000522912 TRIM6Q9C030 488 aaPredicted RBP17.91■□□□□ 0.46
SREK1-212ENST00000522912 ZNF518BQ9C0D4 1074 aa17.91■□□□□ 0.46
SREK1-212ENST00000522912 EPB41L5Q9HCM4 733 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms