RNA–Protein interactions for RNA: ENST00000522165.5

COL13A1-214, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-214ENST00000522165 PHF2O75151 1096 aa27.51■■□□□ 1.99
COL13A1-214ENST00000522165 GPR32O75388 356 aa27.51■■□□□ 1.99
COL13A1-214ENST00000522165 ATICP31939 592 aa27.51■■□□□ 1.99
COL13A1-214ENST00000522165 CDC42EP1Q00587 391 aa27.51■■□□□ 1.99
COL13A1-214ENST00000522165 RGMBQ6NW40 437 aa27.51■■□□□ 1.99
COL13A1-214ENST00000522165 SAPCD2Q86UD0 394 aa27.51■■□□□ 1.99
COL13A1-214ENST00000522165 DDX42Q86XP3 938 aaKnown RBP eCLIP27.51■■□□□ 1.99
COL13A1-214ENST00000522165 IFNL1Q8IU54 200 aa27.51■■□□□ 1.99
COL13A1-214ENST00000522165 MREGQ8N565 214 aa27.51■■□□□ 1.99
COL13A1-214ENST00000522165 TMEM35BQ8NCS4 154 aa27.51■■□□□ 1.99
COL13A1-214ENST00000522165 ZNF518BQ9C0D4 1074 aa27.51■■□□□ 1.99
COL13A1-214ENST00000522165 VRTNQ9H8Y1 702 aa27.51■■□□□ 1.99
COL13A1-214ENST00000522165 PARVAQ9NVD7 372 aa27.51■■□□□ 1.99
COL13A1-214ENST00000522165 CDH5P33151 784 aaPredicted RBP27.5■■□□□ 1.99
COL13A1-214ENST00000522165 RAP1GAPP47736 663 aa27.5■■□□□ 1.99
COL13A1-214ENST00000522165 GUCY2FP51841 1108 aa27.5■■□□□ 1.99
COL13A1-214ENST00000522165 DR1Q01658 176 aa27.5■■□□□ 1.99
COL13A1-214ENST00000522165 TMEM62Q0P6H9 643 aa27.5■■□□□ 1.99
COL13A1-214ENST00000522165 HLTFQ14527 1009 aaKnown RBP eCLIP27.5■■□□□ 1.99
COL13A1-214ENST00000522165 MFSD10Q14728 455 aa27.5■■□□□ 1.99
COL13A1-214ENST00000522165 C1orf131Q8NDD1 294 aaKnown RBP27.5■■□□□ 1.99
COL13A1-214ENST00000522165 GCOM2Q9BZD3 368 aaPredicted RBP27.5■■□□□ 1.99
COL13A1-214ENST00000522165 FAN1Q9Y2M0 1017 aa27.5■■□□□ 1.99
COL13A1-214ENST00000522165 UTP11Q9Y3A2 253 aaKnown RBP27.5■■□□□ 1.99
COL13A1-214ENST00000522165 C2CD2Q9Y426 696 aa27.5■■□□□ 1.99
COL13A1-214ENST00000522165 SMIM35A0A1B0GVV1 85 aa27.5■■□□□ 1.99
COL13A1-214ENST00000522165 CALB1P05937 261 aa27.5■■□□□ 1.99
COL13A1-214ENST00000522165 CYP2B6P20813 491 aa27.5■■□□□ 1.99
COL13A1-214ENST00000522165 GRM5P41594 1212 aa27.5■■□□□ 1.99
COL13A1-214ENST00000522165 FAM193AP78312 1265 aa27.5■■□□□ 1.99
COL13A1-214ENST00000522165 IRX5P78411 483 aaPredicted RBP27.5■■□□□ 1.99
COL13A1-214ENST00000522165 DHX34Q14147 1143 aaKnown RBP27.5■■□□□ 1.99
COL13A1-214ENST00000522165 PPP1R13LQ8WUF5 828 aa27.5■■□□□ 1.99
COL13A1-214ENST00000522165 SDCBP2Q9H190 292 aa27.5■■□□□ 1.99
COL13A1-214ENST00000522165 EIF4BP23588 611 aaKnown RBP27.49■■□□□ 1.99
COL13A1-214ENST00000522165 CHRNA3P32297 505 aa27.49■■□□□ 1.99
COL13A1-214ENST00000522165 RGS2P41220 211 aa27.49■■□□□ 1.99
COL13A1-214ENST00000522165 LACTBP83111 547 aaPredicted RBP27.49■■□□□ 1.99
COL13A1-214ENST00000522165 DCAF4L1Q3SXM0 396 aa27.49■■□□□ 1.99
COL13A1-214ENST00000522165 ALS2CLQ60I27 953 aa27.49■■□□□ 1.99
COL13A1-214ENST00000522165 WDTC1Q8N5D0 677 aa27.49■■□□□ 1.99
COL13A1-214ENST00000522165 PLVAPQ9BX97 442 aa27.49■■□□□ 1.99
COL13A1-214ENST00000522165 VPS18Q9P253 973 aa27.49■■□□□ 1.99
COL13A1-214ENST00000522165 GINS2Q9Y248 185 aa27.49■■□□□ 1.99
COL13A1-214ENST00000522165 TCRBV7S2A1N4TA0A589 114 aa27.48■■□□□ 1.99
COL13A1-214ENST00000522165 FAM187AA6NFU0 413 aa27.48■■□□□ 1.99
COL13A1-214ENST00000522165 DAPK3O43293 454 aa27.48■■□□□ 1.99
COL13A1-214ENST00000522165 HOXA11P31270 313 aaPredicted RBP27.48■■□□□ 1.99
COL13A1-214ENST00000522165 CDH8P55286 799 aa27.48■■□□□ 1.99
COL13A1-214ENST00000522165 FEZF2Q8TBJ5 459 aa27.48■■□□□ 1.99
COL13A1-214ENST00000522165 TRIM51Q9BSJ1 452 aa27.48■■□□□ 1.99
COL13A1-214ENST00000522165 SMYD3Q9H7B4 428 aa27.48■■□□□ 1.99
COL13A1-214ENST00000522165 CDHR5Q9HBB8 845 aa27.48■■□□□ 1.99
COL13A1-214ENST00000522165 GJD2Q9UKL4 321 aa27.48■■□□□ 1.99
COL13A1-214ENST00000522165 TLR3O15455 904 aaKnown RBP27.48■■□□□ 1.99
COL13A1-214ENST00000522165 CYP2C9P11712 490 aa27.48■■□□□ 1.99
COL13A1-214ENST00000522165 POLR2BP30876 1174 aaKnown RBP27.48■■□□□ 1.99
COL13A1-214ENST00000522165 SIX1Q15475 284 aaPredicted RBP27.48■■□□□ 1.99
COL13A1-214ENST00000522165 CYP1B1Q16678 543 aa27.48■■□□□ 1.99
COL13A1-214ENST00000522165 RUFY4Q6ZNE9 571 aa27.48■■□□□ 1.99
COL13A1-214ENST00000522165 NT5DC4Q86YG4 428 aa27.48■■□□□ 1.99
COL13A1-214ENST00000522165 RAB17Q9H0T7 212 aa27.48■■□□□ 1.99
COL13A1-214ENST00000522165 ITGA11Q9UKX5 1188 aa27.48■■□□□ 1.99
COL13A1-214ENST00000522165 MTUS1Q9ULD2 1270 aa27.48■■□□□ 1.99
COL13A1-214ENST00000522165 HAS3O00219 553 aa27.47■■□□□ 1.99
COL13A1-214ENST00000522165 PAEPP09466 180 aa27.47■■□□□ 1.99
COL13A1-214ENST00000522165 PSEN2P49810 448 aa27.47■■□□□ 1.99
COL13A1-214ENST00000522165 CPT1AP50416 773 aa27.47■■□□□ 1.99
COL13A1-214ENST00000522165 RAD23BP54727 409 aa27.47■■□□□ 1.99
COL13A1-214ENST00000522165 GYS2P54840 703 aa27.47■■□□□ 1.99
COL13A1-214ENST00000522165 HIC1Q14526 733 aa27.47■■□□□ 1.99
COL13A1-214ENST00000522165 CD302Q8IX05 232 aa27.47■■□□□ 1.99
COL13A1-214ENST00000522165 GADD45GIP1Q8TAE8 222 aaPredicted RBP27.47■■□□□ 1.99
COL13A1-214ENST00000522165 RIN2Q8WYP3 895 aaPredicted RBP27.47■■□□□ 1.99
COL13A1-214ENST00000522165 MAGOHBQ96A72 148 aaKnown RBP27.47■■□□□ 1.99
COL13A1-214ENST00000522165 C18orf8Q96DM3 657 aa27.47■■□□□ 1.99
COL13A1-214ENST00000522165 DDX27Q96GQ7 796 aaKnown RBP27.47■■□□□ 1.99
COL13A1-214ENST00000522165 APBA2Q99767 749 aa27.47■■□□□ 1.99
COL13A1-214ENST00000522165 NEUROG2Q9H2A3 272 aa27.47■■□□□ 1.99
COL13A1-214ENST00000522165 CYP3A43Q9HB55 503 aa27.47■■□□□ 1.99
COL13A1-214ENST00000522165 FAM114A2Q9NRY5 505 aa27.47■■□□□ 1.99
COL13A1-214ENST00000522165 PCYOX1Q9UHG3 505 aa27.47■■□□□ 1.99
COL13A1-214ENST00000522165 SBDSQ9Y3A5 250 aaKnown RBP eCLIP27.47■■□□□ 1.99
COL13A1-214ENST00000522165 TCRBV5S1A1TA0A578 114 aa27.47■■□□□ 1.99
COL13A1-214ENST00000522165 GJB6O95452 261 aa27.47■■□□□ 1.99
COL13A1-214ENST00000522165 NPTXRO95502 500 aa27.47■■□□□ 1.99
COL13A1-214ENST00000522165 IGHA2P01877 340 aa27.47■■□□□ 1.99
COL13A1-214ENST00000522165 SLC10A3P09131 477 aa27.47■■□□□ 1.99
COL13A1-214ENST00000522165 INHBEP58166 350 aa27.47■■□□□ 1.99
COL13A1-214ENST00000522165 ADAM17P78536 824 aa27.47■■□□□ 1.99
COL13A1-214ENST00000522165 KCTD19Q17RG1 926 aaPredicted RBP27.47■■□□□ 1.99
COL13A1-214ENST00000522165 CATSPER4Q7RTX7 472 aa27.47■■□□□ 1.99
COL13A1-214ENST00000522165 HPDLQ96IR7 371 aa27.47■■□□□ 1.99
COL13A1-214ENST00000522165 DPP3Q9NY33 737 aa27.47■■□□□ 1.99
COL13A1-214ENST00000522165 AGAP1Q9UPQ3 857 aa27.47■■□□□ 1.99
COL13A1-214ENST00000522165 CEP83Q9Y592 693 aa27.47■■□□□ 1.99
COL13A1-214ENST00000522165 CITO14578 2027 aa27.46■■□□□ 1.99
COL13A1-214ENST00000522165 FSCN2O14926 492 aa27.46■■□□□ 1.99
COL13A1-214ENST00000522165 HSF2BPO75031 334 aa27.46■■□□□ 1.99
COL13A1-214ENST00000522165 RNF40O75150 1001 aa27.46■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms