RNA–Protein interactions for RNA: ENST00000509784.1

CALCOCO2-216, Transcript of calcium binding and coiled-coil domain 2, human

TSL 4

Gene CALCOCO2, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALCOCO2-216	ENST00000509784	ATXN2L	Q8WWM7	1075 aa	Known RBP	3.81	□□□□□ -1.8
CALCOCO2-216	ENST00000509784	KIAA1191	Q96A73	305 aa		3.81	□□□□□ -1.8
CALCOCO2-216	ENST00000509784	MPHOSPH9	Q99550	1183 aa		3.81	□□□□□ -1.8
CALCOCO2-216	ENST00000509784	VPS11	Q9H270	941 aa		3.81	□□□□□ -1.8
CALCOCO2-216	ENST00000509784	ADAM7	Q9H2U9	754 aa		3.81	□□□□□ -1.8
CALCOCO2-216	ENST00000509784	PPCS	Q9HAB8	311 aa		3.81	□□□□□ -1.8
CALCOCO2-216	ENST00000509784	ARFGAP3	Q9NP61	516 aa		3.81	□□□□□ -1.8
CALCOCO2-216	ENST00000509784	GPRC5B	Q9NZH0	403 aa		3.81	□□□□□ -1.8
CALCOCO2-216	ENST00000509784	FAM30A	Q9NZY2	134 aa		3.81	□□□□□ -1.8
CALCOCO2-216	ENST00000509784	COL20A1	Q9P218	1284 aa		3.81	□□□□□ -1.8
CALCOCO2-216	ENST00000509784	CDC23	Q9UJX2	597 aa		3.81	□□□□□ -1.8
CALCOCO2-216	ENST00000509784	AGAP1	Q9UPQ3	857 aa		3.81	□□□□□ -1.8
CALCOCO2-216	ENST00000509784	CLCA2	Q9UQC9	943 aa		3.81	□□□□□ -1.8
CALCOCO2-216	ENST00000509784	EFCAB5	A4FU69	1503 aa		3.8	□□□□□ -1.8
CALCOCO2-216	ENST00000509784	TRIM43B	A6NCK2	446 aa		3.8	□□□□□ -1.8
CALCOCO2-216	ENST00000509784	OTOL1	A6NHN0	477 aa	Predicted RBP	3.8	□□□□□ -1.8
CALCOCO2-216	ENST00000509784	DBX1	A6NMT0	343 aa		3.8	□□□□□ -1.8
CALCOCO2-216	ENST00000509784	TMEM233	B4DJY2	109 aa		3.8	□□□□□ -1.8
CALCOCO2-216	ENST00000509784		M0QYG6	137 aa		3.8	□□□□□ -1.8
CALCOCO2-216	ENST00000509784	MYO1C	O00159	1063 aa		3.8	□□□□□ -1.8
CALCOCO2-216	ENST00000509784	APOL1	O14791	398 aa		3.8	□□□□□ -1.8
CALCOCO2-216	ENST00000509784	FOXS1	O43638	330 aa		3.8	□□□□□ -1.8
CALCOCO2-216	ENST00000509784	PLAT	P00750	562 aa		3.8	□□□□□ -1.8
CALCOCO2-216	ENST00000509784	ANXA1	P04083	346 aa		3.8	□□□□□ -1.8
CALCOCO2-216	ENST00000509784	GRP	P07492	148 aa		3.8	□□□□□ -1.8
CALCOCO2-216	ENST00000509784	HARS	P12081	509 aa	Known RBP	3.8	□□□□□ -1.8
CALCOCO2-216	ENST00000509784	MGAT1	P26572	445 aa		3.8	□□□□□ -1.8
CALCOCO2-216	ENST00000509784	CHN2	P52757	468 aa		3.8	□□□□□ -1.8
CALCOCO2-216	ENST00000509784	MAPK10	P53779	464 aa		3.8	□□□□□ -1.8
CALCOCO2-216	ENST00000509784	UCP3	P55916	312 aa		3.8	□□□□□ -1.8
CALCOCO2-216	ENST00000509784	MXRA7	P84157	204 aa		3.8	□□□□□ -1.8
CALCOCO2-216	ENST00000509784	HHEX	Q03014	270 aa		3.8	□□□□□ -1.8
CALCOCO2-216	ENST00000509784	SLC44A4	Q53GD3	710 aa		3.8	□□□□□ -1.8
CALCOCO2-216	ENST00000509784	NOMO2	Q5JPE7	1267 aa		3.8	□□□□□ -1.8
CALCOCO2-216	ENST00000509784	LMBRD2	Q68DH5	695 aa	Predicted RBP	3.8	□□□□□ -1.8
CALCOCO2-216	ENST00000509784	HIBCH	Q6NVY1	386 aa	Predicted RBP	3.8	□□□□□ -1.8
CALCOCO2-216	ENST00000509784	DRICH1	Q6PGQ1	229 aa	Predicted RBP	3.8	□□□□□ -1.8
CALCOCO2-216	ENST00000509784	GLB1L	Q6UWU2	654 aa		3.8	□□□□□ -1.8
CALCOCO2-216	ENST00000509784	SGMS1	Q86VZ5	419 aa		3.8	□□□□□ -1.8
CALCOCO2-216	ENST00000509784	GSPT2	Q8IYD1	628 aa	Known RBP	3.8	□□□□□ -1.8
CALCOCO2-216	ENST00000509784	SLC15A4	Q8N697	577 aa		3.8	□□□□□ -1.8
CALCOCO2-216	ENST00000509784	DNAJC5G	Q8N7S2	189 aa		3.8	□□□□□ -1.8
CALCOCO2-216	ENST00000509784	RNF152	Q8N8N0	203 aa		3.8	□□□□□ -1.8
CALCOCO2-216	ENST00000509784	OR52N2	Q8NGI0	321 aa		3.8	□□□□□ -1.8
CALCOCO2-216	ENST00000509784	POF1B	Q8WVV4	589 aa		3.8	□□□□□ -1.8
CALCOCO2-216	ENST00000509784	MAML1	Q92585	1016 aa		3.8	□□□□□ -1.8
CALCOCO2-216	ENST00000509784	SCAMP4	Q969E2	229 aa		3.8	□□□□□ -1.8
CALCOCO2-216	ENST00000509784	TRIM43	Q96BQ3	446 aa	Predicted RBP	3.8	□□□□□ -1.8
CALCOCO2-216	ENST00000509784	NMD3	Q96D46	503 aa	Known RBP	3.8	□□□□□ -1.8
CALCOCO2-216	ENST00000509784	MSLNL	Q96KJ4	702 aa		3.8	□□□□□ -1.8
CALCOCO2-216	ENST00000509784	KLHL32	Q96NJ5	620 aa		3.8	□□□□□ -1.8
CALCOCO2-216	ENST00000509784	KCNC2	Q96PR1	638 aa		3.8	□□□□□ -1.8
CALCOCO2-216	ENST00000509784	CRB3	Q9BUF7	120 aa		3.8	□□□□□ -1.8
CALCOCO2-216	ENST00000509784	BRIP1	Q9BX63	1249 aa		3.8	□□□□□ -1.8
CALCOCO2-216	ENST00000509784	DPH1	Q9BZG8	443 aa		3.8	□□□□□ -1.8
CALCOCO2-216	ENST00000509784	TINAGL1	Q9GZM7	467 aa	Predicted RBP	3.8	□□□□□ -1.8
CALCOCO2-216	ENST00000509784	ZCCHC4	Q9H5U6	513 aa		3.8	□□□□□ -1.8
CALCOCO2-216	ENST00000509784	SMURF2	Q9HAU4	748 aa		3.8	□□□□□ -1.8
CALCOCO2-216	ENST00000509784	GPR35	Q9HC97	309 aa		3.8	□□□□□ -1.8
CALCOCO2-216	ENST00000509784	TRMT13	Q9NUP7	481 aa	Known RBP	3.8	□□□□□ -1.8
CALCOCO2-216	ENST00000509784	LRCH1	Q9Y2L9	728 aa		3.8	□□□□□ -1.8
CALCOCO2-216	ENST00000509784	PLEKHM1	Q9Y4G2	1056 aa		3.8	□□□□□ -1.8
CALCOCO2-216	ENST00000509784	PCDHGB2	Q9Y5G2	931 aa		3.8	□□□□□ -1.8
CALCOCO2-216	ENST00000509784	HECW1	Q76N89	1606 aa		3.8	□□□□□ -1.8
CALCOCO2-216	ENST00000509784	AQR	O60306	1485 aa	Known RBP eCLIP	3.79	□□□□□ -1.8
CALCOCO2-216	ENST00000509784	NCOA2	Q15596	1464 aa		3.79	□□□□□ -1.8
CALCOCO2-216	ENST00000509784	FYCO1	Q9BQS8	1478 aa		3.79	□□□□□ -1.8
CALCOCO2-216	ENST00000509784	FHAD1	B1AJZ9	1412 aa		3.79	□□□□□ -1.8
CALCOCO2-216	ENST00000509784	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	3.79	□□□□□ -1.8
CALCOCO2-216	ENST00000509784	GCC2	Q8IWJ2	1684 aa		3.79	□□□□□ -1.8
CALCOCO2-216	ENST00000509784	CAPN14	A8MX76	684 aa		3.79	□□□□□ -1.8
CALCOCO2-216	ENST00000509784		E9PLN8	166 aa		3.79	□□□□□ -1.8
CALCOCO2-216	ENST00000509784	GPR42	O15529	346 aa		3.79	□□□□□ -1.8
CALCOCO2-216	ENST00000509784	PRICKLE3	O43900	615 aa	Predicted RBP	3.79	□□□□□ -1.8
CALCOCO2-216	ENST00000509784	VPS4B	O75351	444 aa		3.79	□□□□□ -1.8
CALCOCO2-216	ENST00000509784	TCEA3	O75764	348 aa		3.79	□□□□□ -1.8
CALCOCO2-216	ENST00000509784	DNAJB5	O75953	348 aa		3.79	□□□□□ -1.8
CALCOCO2-216	ENST00000509784	FGF18	O76093	207 aa		3.79	□□□□□ -1.8
CALCOCO2-216	ENST00000509784	KIF20A	O95235	890 aa		3.79	□□□□□ -1.8
CALCOCO2-216	ENST00000509784	FOS	P01100	380 aa	Predicted RBP	3.79	□□□□□ -1.8
CALCOCO2-216	ENST00000509784	TH	P07101	528 aa		3.79	□□□□□ -1.8
CALCOCO2-216	ENST00000509784	CKB	P12277	381 aa		3.79	□□□□□ -1.8
CALCOCO2-216	ENST00000509784	PPM1A	P35813	382 aa		3.79	□□□□□ -1.8
CALCOCO2-216	ENST00000509784	SLC11A2	P49281	568 aa		3.79	□□□□□ -1.8
CALCOCO2-216	ENST00000509784	POU6F2	P78424	691 aa	Predicted RBP	3.79	□□□□□ -1.8
CALCOCO2-216	ENST00000509784	RAB32	Q13637	225 aa		3.79	□□□□□ -1.8
CALCOCO2-216	ENST00000509784	PMS2P11	Q13670	270 aa		3.79	□□□□□ -1.8
CALCOCO2-216	ENST00000509784	TRIM14	Q14142	442 aa		3.79	□□□□□ -1.8
CALCOCO2-216	ENST00000509784	DHX8	Q14562	1220 aa	Known RBP	3.79	□□□□□ -1.8
CALCOCO2-216	ENST00000509784	ZRSR2	Q15696	482 aa	Known RBP	3.79	□□□□□ -1.8
CALCOCO2-216	ENST00000509784	ARL13B	Q3SXY8	428 aa		3.79	□□□□□ -1.8
CALCOCO2-216	ENST00000509784	AMOT	Q4VCS5	1084 aa		3.79	□□□□□ -1.8
CALCOCO2-216	ENST00000509784	DGKK	Q5KSL6	1271 aa		3.79	□□□□□ -1.8
CALCOCO2-216	ENST00000509784	UBXN11	Q5T124	520 aa		3.79	□□□□□ -1.8
CALCOCO2-216	ENST00000509784	SPTY2D1	Q68D10	685 aa	Predicted RBP	3.79	□□□□□ -1.8
CALCOCO2-216	ENST00000509784	UNC13D	Q70J99	1090 aa		3.79	□□□□□ -1.8
CALCOCO2-216	ENST00000509784	CIR1	Q86X95	450 aa	Predicted RBP	3.79	□□□□□ -1.8
CALCOCO2-216	ENST00000509784	MICU3	Q86XE3	530 aa		3.79	□□□□□ -1.8
CALCOCO2-216	ENST00000509784	MYLK4	Q86YV6	388 aa	Predicted RBP	3.79	□□□□□ -1.8
CALCOCO2-216	ENST00000509784	SYT12	Q8IV01	421 aa		3.79	□□□□□ -1.8

Retrieved 100 of 20,778 RNA–protein pairs in 77 ms