RNA–Protein interactions for RNA: ENST00000503427.5

HMGXB3-202, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,275 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-202ENST00000503427 STX3Q13277 289 aa16.95■□□□□ 0.3
HMGXB3-202ENST00000503427 PAPD7Q5XG87 772 aaKnown RBP16.95■□□□□ 0.3
HMGXB3-202ENST00000503427 APPL2Q8NEU8 664 aa16.95■□□□□ 0.3
HMGXB3-202ENST00000503427 ARL8AQ96BM9 186 aa16.95■□□□□ 0.3
HMGXB3-202ENST00000503427 NAGPAQ9UK23 515 aa16.95■□□□□ 0.3
HMGXB3-202ENST00000503427 COILP38432 576 aaPredicted RBP16.95■□□□□ 0.3
HMGXB3-202ENST00000503427 GTF2A2P52657 109 aa16.95■□□□□ 0.3
HMGXB3-202ENST00000503427 HUNKP57058 714 aa16.95■□□□□ 0.3
HMGXB3-202ENST00000503427 LONP2Q86WA8 852 aa16.95■□□□□ 0.3
HMGXB3-202ENST00000503427 C3orf20Q8ND61 904 aa16.95■□□□□ 0.3
HMGXB3-202ENST00000503427 ERP27Q96DN0 273 aa16.95■□□□□ 0.3
HMGXB3-202ENST00000503427 EML4Q9HC35 981 aaKnown RBP16.95■□□□□ 0.3
HMGXB3-202ENST00000503427 TFR2Q9UP52 801 aa16.95■□□□□ 0.3
HMGXB3-202ENST00000503427 SNX9Q9Y5X1 595 aa16.95■□□□□ 0.3
HMGXB3-202ENST00000503427 ENO1P06733 434 aaKnown RBP16.95■□□□□ 0.3
HMGXB3-202ENST00000503427 FNTAP49354 379 aa16.95■□□□□ 0.3
HMGXB3-202ENST00000503427 ITGA8P53708 1063 aa16.95■□□□□ 0.3
HMGXB3-202ENST00000503427 ALDH18A1P54886 795 aaKnown RBP16.95■□□□□ 0.3
HMGXB3-202ENST00000503427 SESN2P58004 480 aaPredicted RBP16.95■□□□□ 0.3
HMGXB3-202ENST00000503427 OR6P1Q8NGX9 317 aa16.95■□□□□ 0.3
HMGXB3-202ENST00000503427 ULK4Q96C45 1275 aa16.95■□□□□ 0.3
HMGXB3-202ENST00000503427 CEP19Q96LK0 163 aa16.95■□□□□ 0.3
HMGXB3-202ENST00000503427 HLA-DRAP01903 254 aa16.95■□□□□ 0.3
HMGXB3-202ENST00000503427 SLC29A2Q14542 456 aa16.95■□□□□ 0.3
HMGXB3-202ENST00000503427 Q4G0T1 1027 aa16.95■□□□□ 0.3
HMGXB3-202ENST00000503427 EFCAB12Q6NXP0 572 aa16.95■□□□□ 0.3
HMGXB3-202ENST00000503427 NUDT12Q9BQG2 462 aa16.95■□□□□ 0.3
HMGXB3-202ENST00000503427 KBTBD4Q9NVX7 518 aa16.95■□□□□ 0.3
HMGXB3-202ENST00000503427 PLEKP08567 350 aaPredicted RBP16.94■□□□□ 0.3
HMGXB3-202ENST00000503427 EPAS1Q99814 870 aa16.94■□□□□ 0.3
HMGXB3-202ENST00000503427 SP110Q9HB58 689 aa16.94■□□□□ 0.3
HMGXB3-202ENST00000503427 SLC24A3Q9HC58 644 aa16.94■□□□□ 0.3
HMGXB3-202ENST00000503427 GTF3C4Q9UKN8 822 aa16.94■□□□□ 0.3
HMGXB3-202ENST00000503427 SYCE1LA8MT33 242 aa16.94■□□□□ 0.3
HMGXB3-202ENST00000503427 ATP9BO43861 1147 aa16.94■□□□□ 0.3
HMGXB3-202ENST00000503427 KIF1CO43896 1103 aaKnown RBP16.94■□□□□ 0.3
HMGXB3-202ENST00000503427 IMPG1Q17R60 797 aa16.94■□□□□ 0.3
HMGXB3-202ENST00000503427 BTBD8Q5XKL5 378 aa16.94■□□□□ 0.3
HMGXB3-202ENST00000503427 SLC38A7Q9NVC3 462 aa16.94■□□□□ 0.3
HMGXB3-202ENST00000503427 L1RE1Q9UN81 338 aa16.94■□□□□ 0.3
HMGXB3-202ENST00000503427 CYP2B6P20813 491 aa16.94■□□□□ 0.3
HMGXB3-202ENST00000503427 HSD17B4P51659 736 aa16.94■□□□□ 0.3
HMGXB3-202ENST00000503427 ARMC2Q8NEN0 867 aa16.94■□□□□ 0.3
HMGXB3-202ENST00000503427 PAK5Q9P286 719 aa16.94■□□□□ 0.3
HMGXB3-202ENST00000503427 TRAF3IP3Q9Y228 551 aa16.94■□□□□ 0.3
HMGXB3-202ENST00000503427 MTO1Q9Y2Z2 717 aaKnown RBP16.94■□□□□ 0.3
HMGXB3-202ENST00000503427 UBE2Q2LH0YL09 131 aa16.94■□□□□ 0.3
HMGXB3-202ENST00000503427 ANP32DO95626 131 aa16.94■□□□□ 0.3
HMGXB3-202ENST00000503427 RFX8Q6ZV50 586 aa16.94■□□□□ 0.3
HMGXB3-202ENST00000503427 SERPINB12Q96P63 405 aa16.94■□□□□ 0.3
HMGXB3-202ENST00000503427 MROH8Q9H579 483 aa16.94■□□□□ 0.3
HMGXB3-202ENST00000503427 AGPAT3Q9NRZ7 376 aa16.94■□□□□ 0.3
HMGXB3-202ENST00000503427 TBX20Q9UMR3 447 aa16.94■□□□□ 0.3
HMGXB3-202ENST00000503427 CYP2C9P11712 490 aa16.93■□□□□ 0.3
HMGXB3-202ENST00000503427 LCP1P13796 627 aa16.93■□□□□ 0.3
HMGXB3-202ENST00000503427 RECQLP46063 649 aaPredicted RBP16.93■□□□□ 0.3
HMGXB3-202ENST00000503427 TRADDQ15628 312 aa16.93■□□□□ 0.3
HMGXB3-202ENST00000503427 TTI2Q6NXR4 508 aa16.93■□□□□ 0.3
HMGXB3-202ENST00000503427 KIRREL3Q8IZU9 778 aa16.93■□□□□ 0.3
HMGXB3-202ENST00000503427 VGLL2Q8N8G2 317 aa16.93■□□□□ 0.3
HMGXB3-202ENST00000503427 ABCF3Q9NUQ8 709 aa16.93■□□□□ 0.3
HMGXB3-202ENST00000503427 SLC13A4Q9UKG4 626 aa16.93■□□□□ 0.3
HMGXB3-202ENST00000503427 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.93■□□□□ 0.3
HMGXB3-202ENST00000503427 A0A087X0T9 212 aa16.93■□□□□ 0.3
HMGXB3-202ENST00000503427 BNIP3LO60238 219 aa16.93■□□□□ 0.3
HMGXB3-202ENST00000503427 FAM228BP0C875 321 aa16.93■□□□□ 0.3
HMGXB3-202ENST00000503427 CPB1P15086 417 aa16.93■□□□□ 0.3
HMGXB3-202ENST00000503427 SHMT1P34896 483 aa16.93■□□□□ 0.3
HMGXB3-202ENST00000503427 TCF7P36402 384 aaPredicted RBP16.93■□□□□ 0.3
HMGXB3-202ENST00000503427 PKN1Q16512 942 aa16.93■□□□□ 0.3
HMGXB3-202ENST00000503427 ZBTB41Q5SVQ8 909 aa16.93■□□□□ 0.3
HMGXB3-202ENST00000503427 CDKAL1Q5VV42 579 aa16.93■□□□□ 0.3
HMGXB3-202ENST00000503427 ANGPTL8Q6UXH0 198 aa16.93■□□□□ 0.3
HMGXB3-202ENST00000503427 CASKIN2Q8WXE0 1202 aa16.93■□□□□ 0.3
HMGXB3-202ENST00000503427 KCNJ1P48048 391 aa16.93■□□□□ 0.3
HMGXB3-202ENST00000503427 SLC13A5Q86YT5 568 aaPredicted RBP16.93■□□□□ 0.3
HMGXB3-202ENST00000503427 AFG1LQ8WV93 481 aa16.93■□□□□ 0.3
HMGXB3-202ENST00000503427 IDI2Q9BXS1 227 aa16.93■□□□□ 0.3
HMGXB3-202ENST00000503427 PABPC3Q9H361 631 aaKnown RBP16.93■□□□□ 0.3
HMGXB3-202ENST00000503427 GOLPH3Q9H4A6 298 aa16.93■□□□□ 0.3
HMGXB3-202ENST00000503427 RSAD1Q9HA92 442 aa16.93■□□□□ 0.3
HMGXB3-202ENST00000503427 TMEM247A6NEH6 219 aa16.93■□□□□ 0.3
HMGXB3-202ENST00000503427 E5RI56 91 aa16.93■□□□□ 0.3
HMGXB3-202ENST00000503427 PLSCR1O15162 318 aa16.93■□□□□ 0.3
HMGXB3-202ENST00000503427 IL10P22301 178 aa16.93■□□□□ 0.3
HMGXB3-202ENST00000503427 SREBF2Q12772 1141 aa16.93■□□□□ 0.3
HMGXB3-202ENST00000503427 PTK7Q13308 1070 aa16.93■□□□□ 0.3
HMGXB3-202ENST00000503427 SIK2Q9H0K1 926 aa16.93■□□□□ 0.3
HMGXB3-202ENST00000503427 MED24O75448 989 aa16.92■□□□□ 0.3
HMGXB3-202ENST00000503427 RALAP11233 206 aa16.92■□□□□ 0.3
HMGXB3-202ENST00000503427 GCLCP48506 637 aaPredicted RBP16.92■□□□□ 0.3
HMGXB3-202ENST00000503427 CPT1AP50416 773 aa16.92■□□□□ 0.3
HMGXB3-202ENST00000503427 TPI1P60174 286 aa16.92■□□□□ 0.3
HMGXB3-202ENST00000503427 UGP2Q16851 508 aa16.92■□□□□ 0.3
HMGXB3-202ENST00000503427 GRAMD4Q6IC98 578 aa16.92■□□□□ 0.3
HMGXB3-202ENST00000503427 PDCD6IPQ8WUM4 868 aaKnown RBP16.92■□□□□ 0.3
HMGXB3-202ENST00000503427 SNX19Q92543 992 aa16.92■□□□□ 0.3
HMGXB3-202ENST00000503427 NIF3L1Q9GZT8 377 aa16.92■□□□□ 0.3
HMGXB3-202ENST00000503427 OLA1Q9NTK5 396 aaKnown RBP16.92■□□□□ 0.3
HMGXB3-202ENST00000503427 POLIQ9UNA4 740 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms