RNA–Protein interactions for RNA: ENST00000449116.6

SHANK2-210, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 939 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-210ENST00000449116 KAT5Q92993 513 aa15.68■□□□□ 0.1
SHANK2-210ENST00000449116 JAKMIP2Q96AA8 810 aa15.68■□□□□ 0.1
SHANK2-210ENST00000449116 TMEM169Q96HH4 297 aa15.68■□□□□ 0.1
SHANK2-210ENST00000449116 KREMEN1Q96MU8 473 aa15.68■□□□□ 0.1
SHANK2-210ENST00000449116 PBX4Q9BYU1 374 aa15.68■□□□□ 0.1
SHANK2-210ENST00000449116 EDEM3Q9BZQ6 932 aa15.68■□□□□ 0.1
SHANK2-210ENST00000449116 FAM124BQ9H5Z6 455 aaPredicted RBP15.68■□□□□ 0.1
SHANK2-210ENST00000449116 SMYD3Q9H7B4 428 aa15.68■□□□□ 0.1
SHANK2-210ENST00000449116 CYP3A43Q9HB55 503 aa15.68■□□□□ 0.1
SHANK2-210ENST00000449116 SPG21Q9NZD8 308 aa15.68■□□□□ 0.1
SHANK2-210ENST00000449116 MSRAQ9UJ68 235 aa15.68■□□□□ 0.1
SHANK2-210ENST00000449116 SF3B1O75533 1304 aaKnown RBP eCLIP15.68■□□□□ 0.1
SHANK2-210ENST00000449116 A0A1W2PQJ5 194 aa15.67■□□□□ 0.1
SHANK2-210ENST00000449116 I3L4J1 428 aa15.67■□□□□ 0.1
SHANK2-210ENST00000449116 TACC1O75410 805 aa15.67■□□□□ 0.1
SHANK2-210ENST00000449116 GYPCP04921 128 aa15.67■□□□□ 0.1
SHANK2-210ENST00000449116 FAM163BP0C2L3 166 aa15.67■□□□□ 0.1
SHANK2-210ENST00000449116 ODC1P11926 461 aa15.67■□□□□ 0.1
SHANK2-210ENST00000449116 PBX2P40425 430 aa15.67■□□□□ 0.1
SHANK2-210ENST00000449116 RAP1GAPP47736 663 aa15.67■□□□□ 0.1
SHANK2-210ENST00000449116 YWHAEP62258 255 aaKnown RBP15.67■□□□□ 0.1
SHANK2-210ENST00000449116 RAPGEF1Q13905 1077 aa15.67■□□□□ 0.1
SHANK2-210ENST00000449116 ARHGAP44Q17R89 818 aa15.67■□□□□ 0.1
SHANK2-210ENST00000449116 SOWAHAQ2M3V2 549 aa15.67■□□□□ 0.1
SHANK2-210ENST00000449116 PPFIBP1Q86W92 1011 aa15.67■□□□□ 0.1
SHANK2-210ENST00000449116 BCL7CQ8WUZ0 217 aaPredicted RBP15.67■□□□□ 0.1
SHANK2-210ENST00000449116 ARID3AQ99856 593 aa15.67■□□□□ 0.1
SHANK2-210ENST00000449116 STK33Q9BYT3 514 aa15.67■□□□□ 0.1
SHANK2-210ENST00000449116 NLRC4Q9NPP4 1024 aa15.67■□□□□ 0.1
SHANK2-210ENST00000449116 AJAP1Q9UKB5 411 aaPredicted RBP15.67■□□□□ 0.1
SHANK2-210ENST00000449116 DSEQ9UL01 958 aa15.67■□□□□ 0.1
SHANK2-210ENST00000449116 PCDHB8Q9UN66 801 aa15.67■□□□□ 0.1
SHANK2-210ENST00000449116 L1RE1Q9UN81 338 aa15.67■□□□□ 0.1
SHANK2-210ENST00000449116 YBX2Q9Y2T7 364 aaKnown RBP15.67■□□□□ 0.1
SHANK2-210ENST00000449116 SYN3O14994 580 aa15.66■□□□□ 0.1
SHANK2-210ENST00000449116 CYP11A1P05108 521 aa15.66■□□□□ 0.1
SHANK2-210ENST00000449116 TPM1P09493 284 aa15.66■□□□□ 0.1
SHANK2-210ENST00000449116 WEE2P0C1S8 567 aa15.66■□□□□ 0.1
SHANK2-210ENST00000449116 TYMPP19971 482 aa15.66■□□□□ 0.1
SHANK2-210ENST00000449116 CTNNB1P35222 781 aa15.66■□□□□ 0.1
SHANK2-210ENST00000449116 BMPR1AP36894 532 aa15.66■□□□□ 0.1
SHANK2-210ENST00000449116 TBX2Q13207 712 aaPredicted RBP15.66■□□□□ 0.1
SHANK2-210ENST00000449116 SMYD5Q6GMV2 418 aa15.66■□□□□ 0.1
SHANK2-210ENST00000449116 ADGRF2Q8IZF7 708 aa15.66■□□□□ 0.1
SHANK2-210ENST00000449116 TMEM86AQ8N2M4 240 aa15.66■□□□□ 0.1
SHANK2-210ENST00000449116 PDCL2Q8N4E4 241 aa15.66■□□□□ 0.1
SHANK2-210ENST00000449116 TTC39CQ8N584 583 aa15.66■□□□□ 0.1
SHANK2-210ENST00000449116 UBR7Q8N806 425 aa15.66■□□□□ 0.1
SHANK2-210ENST00000449116 SPATA18Q8TC71 538 aa15.66■□□□□ 0.1
SHANK2-210ENST00000449116 SAMD11Q96NU1 681 aa15.66■□□□□ 0.1
SHANK2-210ENST00000449116 SPAG5Q96R06 1193 aa15.66■□□□□ 0.1
SHANK2-210ENST00000449116 PLVAPQ9BX97 442 aa15.66■□□□□ 0.1
SHANK2-210ENST00000449116 GPR62Q9BZJ7 368 aa15.66■□□□□ 0.1
SHANK2-210ENST00000449116 SDCBP2Q9H190 292 aa15.66■□□□□ 0.1
SHANK2-210ENST00000449116 CAPN11Q9UMQ6 739 aa15.66■□□□□ 0.1
SHANK2-210ENST00000449116 KIAA1671Q9BY89 1806 aa15.66■□□□□ 0.1
SHANK2-210ENST00000449116 A0A1W2PPC1 479 aa15.65■□□□□ 0.1
SHANK2-210ENST00000449116 F8VZ95 297 aa15.65■□□□□ 0.1
SHANK2-210ENST00000449116 FGF18O76093 207 aa15.65■□□□□ 0.1
SHANK2-210ENST00000449116 ARHGEF15O94989 841 aa15.65■□□□□ 0.1
SHANK2-210ENST00000449116 EFEMP2O95967 443 aa15.65■□□□□ 0.1
SHANK2-210ENST00000449116 CD58P19256 250 aa15.65■□□□□ 0.1
SHANK2-210ENST00000449116 ACO1P21399 889 aaKnown RBP15.65■□□□□ 0.1
SHANK2-210ENST00000449116 WARSP23381 471 aaKnown RBP15.65■□□□□ 0.1
SHANK2-210ENST00000449116 CASP14P31944 242 aa15.65■□□□□ 0.1
SHANK2-210ENST00000449116 CDH8P55286 799 aa15.65■□□□□ 0.1
SHANK2-210ENST00000449116 JAM2P57087 298 aa15.65■□□□□ 0.1
SHANK2-210ENST00000449116 PLCB3Q01970 1234 aa15.65■□□□□ 0.1
SHANK2-210ENST00000449116 KRT17Q04695 432 aa15.65■□□□□ 0.1
SHANK2-210ENST00000449116 INCA1Q0VD86 236 aa15.65■□□□□ 0.1
SHANK2-210ENST00000449116 DRAP1Q14919 205 aaPredicted RBP15.65■□□□□ 0.1
SHANK2-210ENST00000449116 FAM171A1Q5VUB5 890 aa15.65■□□□□ 0.1
SHANK2-210ENST00000449116 WSCD1Q658N2 575 aa15.65■□□□□ 0.1
SHANK2-210ENST00000449116 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.65■□□□□ 0.1
SHANK2-210ENST00000449116 DDX53Q86TM3 631 aaKnown RBP15.65■□□□□ 0.1
SHANK2-210ENST00000449116 METTL23Q86XA0 190 aa15.65■□□□□ 0.1
SHANK2-210ENST00000449116 RNF168Q8IYW5 571 aaPredicted RBP15.65■□□□□ 0.1
SHANK2-210ENST00000449116 SPC24Q8NBT2 197 aa15.65■□□□□ 0.1
SHANK2-210ENST00000449116 ZNF397Q8NF99 534 aaPredicted RBP15.65■□□□□ 0.1
SHANK2-210ENST00000449116 CPLX3Q8WVH0 158 aa15.65■□□□□ 0.1
SHANK2-210ENST00000449116 KBTBD7Q8WVZ9 684 aa15.65■□□□□ 0.1
SHANK2-210ENST00000449116 SHC3Q92529 594 aa15.65■□□□□ 0.1
SHANK2-210ENST00000449116 BAP1Q92560 729 aa15.65■□□□□ 0.1
SHANK2-210ENST00000449116 TGS1Q96RS0 853 aaKnown RBP15.65■□□□□ 0.1
SHANK2-210ENST00000449116 MRPL45Q9BRJ2 306 aaKnown RBP15.65■□□□□ 0.1
SHANK2-210ENST00000449116 C17orf80Q9BSJ5 609 aa15.65■□□□□ 0.1
SHANK2-210ENST00000449116 GPR88Q9GZN0 384 aa15.65■□□□□ 0.1
SHANK2-210ENST00000449116 NKX2-4Q9H2Z4 354 aa15.65■□□□□ 0.1
SHANK2-210ENST00000449116 CISHQ9NSE2 258 aa15.65■□□□□ 0.1
SHANK2-210ENST00000449116 IMPACTQ9P2X3 320 aa15.65■□□□□ 0.1
SHANK2-210ENST00000449116 STK39Q9UEW8 545 aa15.65■□□□□ 0.1
SHANK2-210ENST00000449116 MYO6Q9UM54 1294 aa15.65■□□□□ 0.1
SHANK2-210ENST00000449116 BARX2Q9UMQ3 279 aaPredicted RBP15.65■□□□□ 0.1
SHANK2-210ENST00000449116 LUC7L2Q9Y383 392 aaKnown RBP15.65■□□□□ 0.1
SHANK2-210ENST00000449116 TIMM13Q9Y5L4 95 aaPredicted RBP15.65■□□□□ 0.1
SHANK2-210ENST00000449116 GOLGA6L6A8MZA4 724 aa15.64■□□□□ 0.09
SHANK2-210ENST00000449116 C5orf67F2Z3F1 127 aa15.64■□□□□ 0.09
SHANK2-210ENST00000449116 RNF225M0QZC1 329 aaPredicted RBP15.64■□□□□ 0.09
SHANK2-210ENST00000449116 CILPO75339 1184 aa15.64■□□□□ 0.09
SHANK2-210ENST00000449116 SOD2P04179 222 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms