RNA–Protein interactions for RNA: ENST00000428894.1

HMGB3P5-201, Transcript of high mobility group box 3 pseudogene 5, humanhuman

BASIC

Gene HMGB3P5, Length 612 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P5-201ENST00000428894 DACT2Q5SW24 774 aa6.45□□□□□ -1.38
HMGB3P5-201ENST00000428894 MIGA2Q7L4E1 593 aa6.45□□□□□ -1.38
HMGB3P5-201ENST00000428894 NLGN4YQ8NFZ3 816 aaPredicted RBP6.45□□□□□ -1.38
HMGB3P5-201ENST00000428894 FUBP1Q96AE4 644 aaKnown RBP6.45□□□□□ -1.38
HMGB3P5-201ENST00000428894 TMX3Q96JJ7 454 aa6.45□□□□□ -1.38
HMGB3P5-201ENST00000428894 PNKPQ96T60 521 aa6.45□□□□□ -1.38
HMGB3P5-201ENST00000428894 CASS4Q9NQ75 786 aa6.45□□□□□ -1.38
HMGB3P5-201ENST00000428894 TDP1Q9NUW8 608 aa6.45□□□□□ -1.38
HMGB3P5-201ENST00000428894 TBCCD1Q9NVR7 557 aa6.45□□□□□ -1.38
HMGB3P5-201ENST00000428894 HSFX1Q9UBD0 423 aa6.45□□□□□ -1.38
HMGB3P5-201ENST00000428894 TRHDEQ9UKU6 1024 aa6.45□□□□□ -1.38
HMGB3P5-201ENST00000428894 NLRP1Q9C000 1473 aa6.45□□□□□ -1.38
HMGB3P5-201ENST00000428894 ARHGAP35Q9NRY4 1499 aa6.45□□□□□ -1.38
HMGB3P5-201ENST00000428894 MAST3O60307 1309 aa6.45□□□□□ -1.38
HMGB3P5-201ENST00000428894 UGGT1Q9NYU2 1555 aa6.44□□□□□ -1.38
HMGB3P5-201ENST00000428894 MIA2Q96PC5 1412 aa6.44□□□□□ -1.38
HMGB3P5-201ENST00000428894 RNF17Q9BXT8 1623 aaKnown RBP6.44□□□□□ -1.38
HMGB3P5-201ENST00000428894 ALKQ9UM73 1620 aa6.44□□□□□ -1.38
HMGB3P5-201ENST00000428894 XPOTO43592 962 aaKnown RBP6.44□□□□□ -1.38
HMGB3P5-201ENST00000428894 PCDHGA12O60330 932 aa6.44□□□□□ -1.38
HMGB3P5-201ENST00000428894 TYRP1P17643 537 aa6.44□□□□□ -1.38
HMGB3P5-201ENST00000428894 CDK11BP21127 795 aaKnown RBP6.44□□□□□ -1.38
HMGB3P5-201ENST00000428894 ITKQ08881 620 aa6.44□□□□□ -1.38
HMGB3P5-201ENST00000428894 ABCB5Q2M3G0 1257 aa6.44□□□□□ -1.38
HMGB3P5-201ENST00000428894 DCBLD1Q8N8Z6 715 aa6.44□□□□□ -1.38
HMGB3P5-201ENST00000428894 HDAC10Q969S8 669 aa6.44□□□□□ -1.38
HMGB3P5-201ENST00000428894 CCDC8Q9H0W5 538 aaPredicted RBP6.44□□□□□ -1.38
HMGB3P5-201ENST00000428894 PCDHGA9Q9Y5G4 932 aaKnown RBP6.44□□□□□ -1.38
HMGB3P5-201ENST00000428894 PCDHGA8Q9Y5G5 932 aa6.44□□□□□ -1.38
HMGB3P5-201ENST00000428894 PCDHGA7Q9Y5G6 932 aa6.44□□□□□ -1.38
HMGB3P5-201ENST00000428894 PCDHGA6Q9Y5G7 932 aa6.44□□□□□ -1.38
HMGB3P5-201ENST00000428894 PCDHGA3Q9Y5H0 932 aa6.44□□□□□ -1.38
HMGB3P5-201ENST00000428894 IQGAP1P46940 1657 aa6.44□□□□□ -1.38
HMGB3P5-201ENST00000428894 LRRIQ1Q96JM4 1722 aa6.44□□□□□ -1.38
HMGB3P5-201ENST00000428894 LRRC7Q96NW7 1537 aa6.44□□□□□ -1.38
HMGB3P5-201ENST00000428894 SYCP2Q9BX26 1530 aa6.44□□□□□ -1.38
HMGB3P5-201ENST00000428894 SALL3Q9BXA9 1300 aa6.44□□□□□ -1.38
HMGB3P5-201ENST00000428894 SYNMO15061 1565 aa6.44□□□□□ -1.38
HMGB3P5-201ENST00000428894 DHX29Q7Z478 1369 aaKnown RBP6.44□□□□□ -1.38
HMGB3P5-201ENST00000428894 FAM135BQ49AJ0 1406 aa6.43□□□□□ -1.38
HMGB3P5-201ENST00000428894 PZPP20742 1482 aa6.43□□□□□ -1.38
HMGB3P5-201ENST00000428894 KIF3BO15066 747 aa6.43□□□□□ -1.38
HMGB3P5-201ENST00000428894 CDC42EP1Q00587 391 aa6.43□□□□□ -1.38
HMGB3P5-201ENST00000428894 SLFN5Q08AF3 891 aa6.43□□□□□ -1.38
HMGB3P5-201ENST00000428894 MTMR1Q13613 665 aa6.43□□□□□ -1.38
HMGB3P5-201ENST00000428894 PRR16Q569H4 304 aa6.43□□□□□ -1.38
HMGB3P5-201ENST00000428894 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.43□□□□□ -1.38
HMGB3P5-201ENST00000428894 PRIMA1Q86XR5 153 aa6.43□□□□□ -1.38
HMGB3P5-201ENST00000428894 ADGRG3Q86Y34 549 aa6.43□□□□□ -1.38
HMGB3P5-201ENST00000428894 SLC9A6Q92581 669 aa6.43□□□□□ -1.38
HMGB3P5-201ENST00000428894 UNKLQ9H9P5 680 aaKnown RBP6.43□□□□□ -1.38
HMGB3P5-201ENST00000428894 GPATCH8Q9UKJ3 1502 aaKnown RBP6.43□□□□□ -1.38
HMGB3P5-201ENST00000428894 INO80Q9ULG1 1556 aaPredicted RBP6.43□□□□□ -1.38
HMGB3P5-201ENST00000428894 RTEL1-TNFRSF6BF6WH68 1400 aa6.42□□□□□ -1.38
HMGB3P5-201ENST00000428894 CASKIN1Q8WXD9 1431 aa6.42□□□□□ -1.38
HMGB3P5-201ENST00000428894 POLR2AP24928 1970 aaKnown RBP6.42□□□□□ -1.38
HMGB3P5-201ENST00000428894 MYADML2A6NDP7 307 aa6.42□□□□□ -1.38
HMGB3P5-201ENST00000428894 GRM6O15303 877 aa6.42□□□□□ -1.38
HMGB3P5-201ENST00000428894 HTRA2O43464 458 aaPredicted RBP6.42□□□□□ -1.38
HMGB3P5-201ENST00000428894 MTHFD1P11586 935 aaKnown RBP6.42□□□□□ -1.38
HMGB3P5-201ENST00000428894 SLC6A4P31645 630 aa6.42□□□□□ -1.38
HMGB3P5-201ENST00000428894 CDKN1CP49918 316 aaPredicted RBP6.42□□□□□ -1.38
HMGB3P5-201ENST00000428894 VAV2P52735 878 aa6.42□□□□□ -1.38
HMGB3P5-201ENST00000428894 IL10RAQ13651 578 aa6.42□□□□□ -1.38
HMGB3P5-201ENST00000428894 FAM50AQ14320 339 aaKnown RBP6.42□□□□□ -1.38
HMGB3P5-201ENST00000428894 PCBP2Q15366 365 aaKnown RBP eCLIP6.42□□□□□ -1.38
HMGB3P5-201ENST00000428894 GEN1Q17RS7 908 aa6.42□□□□□ -1.38
HMGB3P5-201ENST00000428894 Q6ZNX1 250 aa6.42□□□□□ -1.38
HMGB3P5-201ENST00000428894 COLGALT2Q8IYK4 626 aa6.42□□□□□ -1.38
HMGB3P5-201ENST00000428894 IFI44Q8TCB0 444 aa6.42□□□□□ -1.38
HMGB3P5-201ENST00000428894 MTMR8Q96EF0 704 aa6.42□□□□□ -1.38
HMGB3P5-201ENST00000428894 PTCD3Q96EY7 689 aaKnown RBP6.42□□□□□ -1.38
HMGB3P5-201ENST00000428894 MED15Q96RN5 788 aa6.42□□□□□ -1.38
HMGB3P5-201ENST00000428894 PTGFRNQ9P2B2 879 aa6.42□□□□□ -1.38
HMGB3P5-201ENST00000428894 LIMCH1Q9UPQ0 1083 aa6.42□□□□□ -1.38
HMGB3P5-201ENST00000428894 IPPQ9Y573 584 aa6.42□□□□□ -1.38
HMGB3P5-201ENST00000428894 INSL6Q9Y581 213 aa6.42□□□□□ -1.38
HMGB3P5-201ENST00000428894 MRFAP1Q9Y605 127 aa6.42□□□□□ -1.38
HMGB3P5-201ENST00000428894 CCNB3Q8WWL7 1395 aa6.42□□□□□ -1.38
HMGB3P5-201ENST00000428894 SHTN1A0MZ66 631 aa6.41□□□□□ -1.38
HMGB3P5-201ENST00000428894 CCDC154A6NI56 674 aa6.41□□□□□ -1.38
HMGB3P5-201ENST00000428894 KATNA1O75449 491 aa6.41□□□□□ -1.38
HMGB3P5-201ENST00000428894 HAUS5O94927 633 aa6.41□□□□□ -1.38
HMGB3P5-201ENST00000428894 AGFG2O95081 481 aa6.41□□□□□ -1.38
HMGB3P5-201ENST00000428894 ZFPL1O95159 310 aa6.41□□□□□ -1.38
HMGB3P5-201ENST00000428894 SBK3P0C264 359 aa6.41□□□□□ -1.38
HMGB3P5-201ENST00000428894 FCER1AP12319 257 aa6.41□□□□□ -1.38
HMGB3P5-201ENST00000428894 AMPD3Q01432 767 aa6.41□□□□□ -1.38
HMGB3P5-201ENST00000428894 KIF23Q02241 960 aaPredicted RBP6.41□□□□□ -1.38
HMGB3P5-201ENST00000428894 C3orf36Q3SXR2 165 aa6.41□□□□□ -1.38
HMGB3P5-201ENST00000428894 PABPC1LQ4VXU2 614 aaKnown RBP6.41□□□□□ -1.38
HMGB3P5-201ENST00000428894 UTP14CQ5TAP6 766 aaKnown RBP6.41□□□□□ -1.38
HMGB3P5-201ENST00000428894 SIMC1Q8NDZ2 872 aa6.41□□□□□ -1.38
HMGB3P5-201ENST00000428894 TEKT5Q96M29 485 aa6.41□□□□□ -1.38
HMGB3P5-201ENST00000428894 BBC3Q96PG8 261 aaPredicted RBP6.41□□□□□ -1.38
HMGB3P5-201ENST00000428894 AIFM2Q9BRQ8 373 aa6.41□□□□□ -1.38
HMGB3P5-201ENST00000428894 EID1Q9Y6B2 187 aa6.41□□□□□ -1.38
HMGB3P5-201ENST00000428894 STRCP1A6NGW2 1772 aa6.41□□□□□ -1.38
HMGB3P5-201ENST00000428894 KDM5DQ9BY66 1539 aa6.4□□□□□ -1.38
HMGB3P5-201ENST00000428894 GABRDO14764 452 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms