RNA–Protein interactions for RNA: tP(UGG)A

TRN1, Transcript of Proline tRNA (tRNA-Pro), predicted by tRNAscan-SE analysis, yeastyeast

Gene TRN1, Length 72 nt, Biotype tRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRN1tP(UGG)A YJR056CP47115 236 aa12.87□□□□□ -0.35
TRN1tP(UGG)A RPL9BP51401 191 aaKnown RBP12.87□□□□□ -0.35
TRN1tP(UGG)A YMR317WQ04893 1140 aa12.87□□□□□ -0.35
TRN1tP(UGG)A ATG5Q12380 294 aa12.87□□□□□ -0.35
TRN1tP(UGG)A RPB9P27999 122 aa12.86□□□□□ -0.35
TRN1tP(UGG)A SPS18P32572 300 aa12.86□□□□□ -0.35
TRN1tP(UGG)A YHR138CP38841 114 aaPredicted RBP12.86□□□□□ -0.35
TRN1tP(UGG)A PAM18Q07914 168 aa12.86□□□□□ -0.35
TRN1tP(UGG)A YOR097CQ12274 175 aaPredicted RBP12.86□□□□□ -0.35
TRN1tP(UGG)A YGL194C-AQ2V2P6 80 aa12.86□□□□□ -0.35
TRN1tP(UGG)A MIX17Q03667 156 aa12.85□□□□□ -0.35
TRN1tP(UGG)A HOF1Q05080 669 aa12.85□□□□□ -0.35
TRN1tP(UGG)A YLR146W-AQ2V2P1 62 aa12.85□□□□□ -0.35
TRN1tP(UGG)A SEC22P22214 214 aa12.84□□□□□ -0.35
TRN1tP(UGG)A MRS4P23500 304 aa12.84□□□□□ -0.35
TRN1tP(UGG)A RPL13BP40212 199 aaKnown RBP12.84□□□□□ -0.35
TRN1tP(UGG)A YJR111CP47148 283 aaKnown RBP12.84□□□□□ -0.35
TRN1tP(UGG)A ACT1P60010 375 aaKnown RBP12.84□□□□□ -0.35
TRN1tP(UGG)A PLP1Q04004 230 aa12.84□□□□□ -0.35
TRN1tP(UGG)A RPL13AQ12690 199 aaPredicted RBP12.84□□□□□ -0.35
TRN1tP(UGG)A YBR255C-AQ3E776 120 aa12.84□□□□□ -0.35
TRN1tP(UGG)A MAG1P22134 296 aaKnown RBP12.83□□□□□ -0.36
TRN1tP(UGG)A PDC2P32896 925 aa12.83□□□□□ -0.36
TRN1tP(UGG)A GLY1P37303 387 aaKnown RBP12.83□□□□□ -0.36
TRN1tP(UGG)A VMA22P38784 181 aa12.83□□□□□ -0.36
TRN1tP(UGG)A ECM27P47144 725 aa12.83□□□□□ -0.36
TRN1tP(UGG)A PUS4P48567 403 aaKnown RBP12.83□□□□□ -0.36
TRN1tP(UGG)A PKP2P53170 491 aa12.83□□□□□ -0.36
TRN1tP(UGG)A MSO1P53604 210 aaKnown RBP12.83□□□□□ -0.36
TRN1tP(UGG)A GPI15P53961 229 aa12.83□□□□□ -0.36
TRN1tP(UGG)A ATO3Q12359 275 aa12.83□□□□□ -0.36
TRN1tP(UGG)A BGL2P15703 313 aaKnown RBP12.82□□□□□ -0.36
TRN1tP(UGG)A TMA10Q06177 86 aa12.82□□□□□ -0.36
TRN1tP(UGG)A STF2P16965 84 aa12.81□□□□□ -0.36
TRN1tP(UGG)A GEP4P38812 185 aa12.81□□□□□ -0.36
TRN1tP(UGG)A SWM2P40342 146 aa12.81□□□□□ -0.36
TRN1tP(UGG)A PNC1P53184 216 aaKnown RBP12.81□□□□□ -0.36
TRN1tP(UGG)A YNL234WP53857 426 aa12.81□□□□□ -0.36
TRN1tP(UGG)A FSH2Q05015 223 aa12.81□□□□□ -0.36
TRN1tP(UGG)A YNG1Q08465 219 aa12.81□□□□□ -0.36
TRN1tP(UGG)A YER145C-AA0A023PYF4 145 aa12.8□□□□□ -0.36
TRN1tP(UGG)A VPS63O13549 108 aa12.8□□□□□ -0.36
TRN1tP(UGG)A ADE8P04161 214 aa12.8□□□□□ -0.36
TRN1tP(UGG)A HEM13P11353 328 aaKnown RBP12.8□□□□□ -0.36
TRN1tP(UGG)A RFC2P40348 353 aa12.8□□□□□ -0.36
TRN1tP(UGG)A YIP1P53039 248 aa12.8□□□□□ -0.36
TRN1tP(UGG)A YGR151CP53287 111 aa12.8□□□□□ -0.36
TRN1tP(UGG)A YIF1P53845 314 aaKnown RBP12.8□□□□□ -0.36
TRN1tP(UGG)A DID2P69771 204 aa12.8□□□□□ -0.36
TRN1tP(UGG)A STD1Q02794 444 aa12.8□□□□□ -0.36
TRN1tP(UGG)A FCY1Q12178 158 aa12.8□□□□□ -0.36
TRN1tP(UGG)A ISN1Q99312 450 aa12.8□□□□□ -0.36
TRN1tP(UGG)A RPL15AP05748 204 aaKnown RBP12.79□□□□□ -0.36
TRN1tP(UGG)A ERV1P27882 189 aa12.79□□□□□ -0.36
TRN1tP(UGG)A SRY1P36007 326 aa12.79□□□□□ -0.36
TRN1tP(UGG)A PIC2P40035 300 aa12.79□□□□□ -0.36
TRN1tP(UGG)A YER188WP40103 239 aa12.79□□□□□ -0.36
TRN1tP(UGG)A ARP3P47117 449 aaKnown RBP12.79□□□□□ -0.36
TRN1tP(UGG)A JAC1P53193 184 aa12.79□□□□□ -0.36
TRN1tP(UGG)A RPL15BP54780 204 aaPredicted RBP12.79□□□□□ -0.36
TRN1tP(UGG)A HED1Q03937 162 aa12.79□□□□□ -0.36
TRN1tP(UGG)A ERP1Q05359 219 aaKnown RBP12.79□□□□□ -0.36
TRN1tP(UGG)A AIM45Q12480 344 aaKnown RBP12.79□□□□□ -0.36
TRN1tP(UGG)A YKL162CP36052 402 aa12.78□□□□□ -0.36
TRN1tP(UGG)A YEA6P39953 335 aa12.78□□□□□ -0.36
TRN1tP(UGG)A BNA1P47096 177 aa12.78□□□□□ -0.36
TRN1tP(UGG)A AEP3Q12089 606 aa12.78□□□□□ -0.36
TRN1tP(UGG)A PHO85P17157 305 aa12.77□□□□□ -0.37
TRN1tP(UGG)A NOP16P40007 231 aaKnown RBP12.77□□□□□ -0.37
TRN1tP(UGG)A DAL4Q04895 635 aa12.77□□□□□ -0.37
TRN1tP(UGG)A JID1Q12350 301 aa12.77□□□□□ -0.37
TRN1tP(UGG)A ATG31Q12421 196 aa12.77□□□□□ -0.37
TRN1tP(UGG)A HBN1Q96VH4 193 aa12.77□□□□□ -0.37
TRN1tP(UGG)A CCW14O13547 238 aa12.76□□□□□ -0.37
TRN1tP(UGG)A TAD2P47058 250 aa12.76□□□□□ -0.37
TRN1tP(UGG)A CRH1P53301 507 aa12.76□□□□□ -0.37
TRN1tP(UGG)A YMR090WQ04304 227 aaKnown RBP12.76□□□□□ -0.37
TRN1tP(UGG)A COA2Q3E823 68 aa12.76□□□□□ -0.37
TRN1tP(UGG)A RAD23P32628 398 aaKnown RBP12.75□□□□□ -0.37
TRN1tP(UGG)A ATP3P38077 311 aaKnown RBP12.75□□□□□ -0.37
TRN1tP(UGG)A PHM8P40025 321 aa12.75□□□□□ -0.37
TRN1tP(UGG)A AIR1P40507 360 aaKnown RBP12.75□□□□□ -0.37
TRN1tP(UGG)A DFG10P40526 253 aa12.75□□□□□ -0.37
TRN1tP(UGG)A YGR050CP53231 118 aa12.75□□□□□ -0.37
TRN1tP(UGG)A YMR166CQ03829 368 aa12.75□□□□□ -0.37
TRN1tP(UGG)A ANT1Q06497 328 aa12.75□□□□□ -0.37
TRN1tP(UGG)A HTB1P02293 131 aaKnown RBP12.74□□□□□ -0.37
TRN1tP(UGG)A ECM31P38122 312 aa12.74□□□□□ -0.37
TRN1tP(UGG)A AGX1P43567 385 aa12.74□□□□□ -0.37
TRN1tP(UGG)A COA4Q05809 96 aa12.74□□□□□ -0.37
TRN1tP(UGG)A YBR298C-AQ8TGK4 73 aa12.74□□□□□ -0.37
TRN1tP(UGG)A URA5P13298 226 aaKnown RBP12.73□□□□□ -0.37
TRN1tP(UGG)A PRE3P38624 215 aa12.73□□□□□ -0.37
TRN1tP(UGG)A YGL117WP53133 265 aa12.73□□□□□ -0.37
TRN1tP(UGG)A FCF2Q12035 217 aaPredicted RBP12.73□□□□□ -0.37
TRN1tP(UGG)A RAX2Q12465 1220 aa12.73□□□□□ -0.37
TRN1tP(UGG)A NOP1P15646 327 aaKnown RBP12.72□□□□□ -0.37
TRN1tP(UGG)A YPL108WQ02872 168 aaPredicted RBP12.71□□□□□ -0.37
TRN1tP(UGG)A MCH1Q07376 486 aa12.71□□□□□ -0.37
TRN1tP(UGG)A NDE2Q07500 545 aa12.71□□□□□ -0.37
Retrieved 100 of 5,963 RNA–protein pairs in 30.6 ms