RNA–Protein interactions for RNA: snR56

snR56, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR56, Length 88 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR56snR56 PET100P38958 111 aa-1.4□□□□□ -2.63
snR56snR56 TMA23Q03525 211 aa-1.4□□□□□ -2.63
snR56snR56 DGA1Q08650 418 aa-1.41□□□□□ -2.64
snR56snR56 URA5P13298 226 aaKnown RBP-1.42□□□□□ -2.64
snR56snR56 ATP15P21306 62 aa-1.42□□□□□ -2.64
snR56snR56 HOC1P47124 396 aa-1.42□□□□□ -2.64
snR56snR56 EMC2P47133 292 aaKnown RBP-1.42□□□□□ -2.64
snR56snR56 YDR249CQ03787 373 aa-1.42□□□□□ -2.64
snR56snR56 RNH202Q05635 350 aa-1.42□□□□□ -2.64
snR56snR56 YLR173WQ06247 608 aa-1.42□□□□□ -2.64
snR56snR56 YJR015WP47090 510 aa-1.43□□□□□ -2.64
snR56snR56 TRM9P49957 279 aa-1.43□□□□□ -2.64
snR56snR56 BET1P22804 142 aa-1.44□□□□□ -2.64
snR56snR56 TCA17P32613 152 aa-1.44□□□□□ -2.64
snR56snR56 AIM25P47140 327 aa-1.44□□□□□ -2.64
snR56snR56 THG1P53215 237 aaKnown RBP-1.44□□□□□ -2.64
snR56snR56 YOL013W-AP0C272 63 aaPredicted RBP-1.45□□□□□ -2.64
snR56snR56 PAN3P36102 679 aaPredicted RBP-1.45□□□□□ -2.64
snR56snR56 MAK5P38112 773 aaPredicted RBP-1.45□□□□□ -2.64
snR56snR56 ALB1P47019 175 aaPredicted RBP-1.45□□□□□ -2.64
snR56snR56 VPS71Q03433 280 aa-1.45□□□□□ -2.64
snR56snR56 YLR307C-AQ3E825 87 aa-1.45□□□□□ -2.64
snR56snR56 ABP140Q08641 628 aaKnown RBP-1.46□□□□□ -2.64
snR56snR56 YCR001WP25347 104 aa-1.47□□□□□ -2.64
snR56snR56 IDH1P28834 360 aaKnown RBP RIP-Chip data-1.47□□□□□ -2.64not detected
snR56snR56 RPS29BP41058 56 aaKnown RBP-1.47□□□□□ -2.64
snR56snR56 NSA1P53136 463 aaPredicted RBP-1.47□□□□□ -2.64
snR56snR56 BCY1P07278 416 aaKnown RBP-1.48□□□□□ -2.65
snR56snR56 ELP6Q04868 273 aa-1.48□□□□□ -2.65
snR56snR56 POR1P04840 283 aaKnown RBP-1.49□□□□□ -2.65
snR56snR56 RPB3P16370 318 aaKnown RBP-1.49□□□□□ -2.65
snR56snR56 SPT3P06844 337 aa-1.5□□□□□ -2.65
snR56snR56 YLR157W-EP0CF00 54 aa-1.5□□□□□ -2.65
snR56snR56 KSS1P14681 368 aa-1.5□□□□□ -2.65
snR56snR56 ARO7P32178 256 aa-1.5□□□□□ -2.65
snR56snR56 NTF2P33331 125 aaKnown RBP-1.5□□□□□ -2.65
snR56snR56 CDC123Q05791 360 aa-1.5□□□□□ -2.65
snR56snR56 PHO85P17157 305 aa-1.51□□□□□ -2.65
snR56snR56 YKR005CQ02203 525 aa-1.51□□□□□ -2.65
snR56snR56 IRC23Q08416 157 aa-1.51□□□□□ -2.65
snR56snR56 RPL43AP0CX25 92 aaKnown RBP-1.52□□□□□ -2.65
snR56snR56 RPL43BP0CX26 92 aa-1.52□□□□□ -2.65
snR56snR56 AST2P39945 430 aaKnown RBP-1.52□□□□□ -2.65
snR56snR56 FAR7P43592 221 aa-1.52□□□□□ -2.65
snR56snR56 YFR032C-BQ8TGU2 87 aa-1.52□□□□□ -2.65
snR56snR56 PTC1P35182 281 aa-1.53□□□□□ -2.65
snR56snR56 MRPL37P36532 105 aa-1.53□□□□□ -2.65
snR56snR56 SLM6P38343 150 aa-1.53□□□□□ -2.65
snR56snR56 RRN5Q02983 363 aa-1.53□□□□□ -2.65
snR56snR56 UPS1Q05776 175 aa-1.53□□□□□ -2.65
snR56snR56 SNF2P22082 1703 aa-1.54□□□□□ -2.66
snR56snR56 DDR48P18899 430 aaKnown RBP-1.54□□□□□ -2.66
snR56snR56 JLP1Q12358 412 aa-1.54□□□□□ -2.66
snR56snR56 CDC28P00546 298 aaKnown RBP-1.55□□□□□ -2.66
snR56snR56 CUE1P38428 203 aa-1.55□□□□□ -2.66
snR56snR56 YDC1Q02896 317 aa-1.55□□□□□ -2.66
snR56snR56 YBR056W-AI2HB52 66 aa-1.56□□□□□ -2.66
snR56snR56 URA6P15700 204 aa-1.56□□□□□ -2.66
snR56snR56 SFK1P35735 353 aa-1.56□□□□□ -2.66
snR56snR56 GET1P53192 235 aa-1.56□□□□□ -2.66
snR56snR56 YGR050CP53231 118 aa-1.56□□□□□ -2.66
snR56snR56 ERV25P54837 211 aaKnown RBP-1.56□□□□□ -2.66
snR56snR56 KEI1Q06346 221 aa-1.56□□□□□ -2.66
snR56snR56 PST2Q12335 198 aaKnown RBP-1.56□□□□□ -2.66
snR56snR56 MED4Q12343 284 aa-1.56□□□□□ -2.66
snR56snR56 PTM1P32857 523 aa-1.57□□□□□ -2.66
snR56snR56 APS1P35181 156 aa-1.58□□□□□ -2.66
snR56snR56 RTT105P40063 208 aa-1.58□□□□□ -2.66
snR56snR56 YNL134CP53912 376 aaKnown RBP-1.58□□□□□ -2.66
snR56snR56 PET191Q02772 108 aa-1.58□□□□□ -2.66
snR56snR56 RRP36Q12481 300 aaPredicted RBP-1.58□□□□□ -2.66
snR56snR56 IKI3Q06706 1349 aaKnown RBP-1.59□□□□□ -2.66
snR56snR56 BLM10P43583 2143 aa-1.59□□□□□ -2.66
snR56snR56 YIL177CP40434 1758 aa-1.59□□□□□ -2.66
snR56snR56 YJL225CP40889 1758 aa-1.59□□□□□ -2.66
snR56snR56 OPI1P21957 404 aa-1.6□□□□□ -2.67
snR56snR56 MRPL25P23369 157 aa-1.6□□□□□ -2.67
snR56snR56 YKR070WP36151 352 aaKnown RBP-1.6□□□□□ -2.67
snR56snR56 ETR1P38071 380 aa-1.6□□□□□ -2.67
snR56snR56 RMD6P39975 231 aa-1.6□□□□□ -2.67
snR56snR56 LIA1P47120 325 aaKnown RBP-1.6□□□□□ -2.67
snR56snR56 KRE28Q04431 385 aa-1.6□□□□□ -2.67
snR56snR56 GET4Q12125 312 aa-1.6□□□□□ -2.67
snR56snR56 SEY1Q99287 776 aa-1.6□□□□□ -2.67
snR56snR56 CKS1P20486 150 aaKnown RBP-1.62□□□□□ -2.67
snR56snR56 GSP2P32836 220 aaKnown RBP-1.62□□□□□ -2.67
snR56snR56 OM45P16547 393 aa-1.63□□□□□ -2.67
snR56snR56 BXI1P48558 297 aa-1.63□□□□□ -2.67
snR56snR56 NOP19P53317 196 aaPredicted RBP-1.63□□□□□ -2.67
snR56snR56 RNH1Q04740 348 aa-1.63□□□□□ -2.67
snR56snR56 CFT1Q06632 1357 aaKnown RBP-1.63□□□□□ -2.67
snR56snR56 RPO26P20435 155 aa-1.64□□□□□ -2.67
snR56snR56 YMR141CP40211 102 aa-1.64□□□□□ -2.67
snR56snR56 FYV6P53913 173 aa-1.64□□□□□ -2.67
snR56snR56 SEC4P07560 215 aaKnown RBP-1.65□□□□□ -2.67
snR56snR56 MOB1P40484 314 aa-1.65□□□□□ -2.67
snR56snR56 BRR6P53062 197 aa-1.65□□□□□ -2.67
snR56snR56 YNG1Q08465 219 aa-1.65□□□□□ -2.67
snR56snR56 YHR214C-EQ8TGK0 99 aa-1.65□□□□□ -2.67
snR56snR56 OCH1P31755 480 aa-1.66□□□□□ -2.68
Retrieved 100 of 5,963 RNA–protein pairs in 54.6 ms