RNA–Protein interactions for RNA: YLR457C

NBP1, Transcript of Spindle pole body (SPB) component, yeast

Gene NBP1, Length 960 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NBP1	YLR457C	JLP1	Q12358	412 aa		0.93	□□□□□ -2.26
NBP1	YLR457C	LSO2	Q3E772	92 aa	Known RBP	0.93	□□□□□ -2.26
NBP1	YLR457C	TDA8	Q6B2U8	126 aa		0.93	□□□□□ -2.26
NBP1	YLR457C	MGM101	P32787	269 aa	Known RBP	0.92	□□□□□ -2.26
NBP1	YLR457C	MRPL28	P36527	147 aa		0.92	□□□□□ -2.26
NBP1	YLR457C	PRE6	P40303	254 aa	Known RBP	0.92	□□□□□ -2.26
NBP1	YLR457C	EAF6	P47128	113 aa		0.92	□□□□□ -2.26
NBP1	YLR457C	KNH1	P50112	268 aa		0.92	□□□□□ -2.26
NBP1	YLR457C	RPL37B	P51402	88 aa	Known RBP	0.92	□□□□□ -2.26
NBP1	YLR457C	BRR6	P53062	197 aa		0.92	□□□□□ -2.26
NBP1	YLR457C	CUS2	P53830	285 aa	Predicted RBP	0.92	□□□□□ -2.26
NBP1	YLR457C	YDR248C	Q03786	193 aa		0.92	□□□□□ -2.26
NBP1	YLR457C	QCR7	P00128	127 aa		0.91	□□□□□ -2.26
NBP1	YLR457C	IDH1	P28834	360 aa	Known RBP RIP-Chip data	0.91	□□□□□ -2.26	not detected
NBP1	YLR457C	PTM1	P32857	523 aa		0.91	□□□□□ -2.26
NBP1	YLR457C	UTP30	P36144	274 aa	Known RBP	0.91	□□□□□ -2.26
NBP1	YLR457C	IKI1	P38874	309 aa		0.91	□□□□□ -2.26
NBP1	YLR457C	PDR17	P53844	350 aa		0.91	□□□□□ -2.26
NBP1	YLR457C	MRPS17	Q03246	237 aa	Predicted RBP	0.91	□□□□□ -2.26
NBP1	YLR457C	FSF1	Q12029	327 aa	Known RBP	0.91	□□□□□ -2.26
NBP1	YLR457C	YFR032C-B	Q8TGU2	87 aa		0.91	□□□□□ -2.26
NBP1	YLR457C	YIL177C	P40434	1758 aa		0.91	□□□□□ -2.26
NBP1	YLR457C	YJL225C	P40889	1758 aa		0.91	□□□□□ -2.26
NBP1	YLR457C	TIM9	O74700	87 aa		0.9	□□□□□ -2.27
NBP1	YLR457C	GCN3	P14741	305 aa		0.9	□□□□□ -2.27
NBP1	YLR457C	MER1	P16523	270 aa		0.9	□□□□□ -2.27
NBP1	YLR457C	SSO1	P32867	290 aa		0.9	□□□□□ -2.27
NBP1	YLR457C	SNC2	P33328	115 aa		0.9	□□□□□ -2.27
NBP1	YLR457C	APS1	P35181	156 aa		0.9	□□□□□ -2.27
NBP1	YLR457C	YCR087C-A	P37263	153 aa		0.9	□□□□□ -2.27
NBP1	YLR457C	YBR209W	P38311	105 aa		0.9	□□□□□ -2.27
NBP1	YLR457C	AST2	P39945	430 aa	Known RBP	0.9	□□□□□ -2.27
NBP1	YLR457C	RFC4	P40339	323 aa	Known RBP	0.9	□□□□□ -2.27
NBP1	YLR457C	YRB1	P41920	201 aa	Known RBP	0.9	□□□□□ -2.27
NBP1	YLR457C	GET4	Q12125	312 aa		0.9	□□□□□ -2.27
NBP1	YLR457C	TSC3	Q3E790	80 aa		0.9	□□□□□ -2.27
NBP1	YLR457C	CHD1	P32657	1468 aa		0.89	□□□□□ -2.27
NBP1	YLR457C	YPK2	P18961	677 aa		0.89	□□□□□ -2.27
NBP1	YLR457C	ADE1	P27616	306 aa		0.89	□□□□□ -2.27
NBP1	YLR457C	SEC17	P32602	292 aa		0.89	□□□□□ -2.27
NBP1	YLR457C	TCA17	P32613	152 aa		0.89	□□□□□ -2.27
NBP1	YLR457C	HUA1	P40325	198 aa		0.89	□□□□□ -2.27
NBP1	YLR457C	AIM25	P47140	327 aa		0.89	□□□□□ -2.27
NBP1	YLR457C	YGR050C	P53231	118 aa		0.89	□□□□□ -2.27
NBP1	YLR457C	ABP140	Q08641	628 aa	Known RBP	0.89	□□□□□ -2.27
NBP1	YLR457C	MCP1	Q12106	302 aa		0.89	□□□□□ -2.27
NBP1	YLR457C	NCB2	Q92317	146 aa		0.89	□□□□□ -2.27
NBP1	YLR457C	JIP3	O13555	125 aa		0.88	□□□□□ -2.27
NBP1	YLR457C	SEC4	P07560	215 aa	Known RBP	0.88	□□□□□ -2.27
NBP1	YLR457C	GVP36	P40531	326 aa	Known RBP	0.88	□□□□□ -2.27
NBP1	YLR457C	FAR7	P43592	221 aa		0.88	□□□□□ -2.27
NBP1	YLR457C	IRC18	P47056	224 aa		0.88	□□□□□ -2.27
NBP1	YLR457C	CGR1	P53188	120 aa		0.88	□□□□□ -2.27
NBP1	YLR457C	GPM2	Q12008	311 aa		0.88	□□□□□ -2.27
NBP1	YLR457C	RME1	P32338	300 aa	Known RBP	0.87	□□□□□ -2.27
NBP1	YLR457C	ASF2	P32448	525 aa	Predicted RBP	0.87	□□□□□ -2.27
NBP1	YLR457C	PRM8	P53174	237 aa		0.87	□□□□□ -2.27
NBP1	YLR457C	GET1	P53192	235 aa		0.87	□□□□□ -2.27
NBP1	YLR457C	LSM7	P53905	115 aa	Known RBP	0.87	□□□□□ -2.27
NBP1	YLR457C	GGA1	Q06336	557 aa		0.87	□□□□□ -2.27
NBP1	YLR457C	YNG1	Q08465	219 aa		0.87	□□□□□ -2.27
NBP1	YLR457C	ATG40	Q99325	256 aa		0.87	□□□□□ -2.27
NBP1	YLR457C	SIR2	P06700	562 aa		0.86	□□□□□ -2.27
NBP1	YLR457C	MRS1	P07266	363 aa		0.86	□□□□□ -2.27
NBP1	YLR457C	RPL27A	P0C2H6	136 aa	Known RBP	0.86	□□□□□ -2.27
NBP1	YLR457C	ATP15	P21306	62 aa		0.86	□□□□□ -2.27
NBP1	YLR457C	RMD6	P39975	231 aa		0.86	□□□□□ -2.27
NBP1	YLR457C	SOK1	P40317	901 aa		0.86	□□□□□ -2.27
NBP1	YLR457C	MMS2	P53152	137 aa		0.86	□□□□□ -2.27
NBP1	YLR457C	YMR007W	Q03675	126 aa		0.86	□□□□□ -2.27
NBP1	YLR457C	YMR226C	Q05016	267 aa	Known RBP	0.86	□□□□□ -2.27
NBP1	YLR457C	FAS1	P07149	2051 aa	Known RBP	0.85	□□□□□ -2.27
NBP1	YLR457C	YLR236C	A0A023PZG4	107 aa		0.85	□□□□□ -2.27
NBP1	YLR457C	KSS1	P14681	368 aa		0.85	□□□□□ -2.27
NBP1	YLR457C	YCR090C	P25654	182 aa	Known RBP	0.85	□□□□□ -2.27
NBP1	YLR457C	VMA22	P38784	181 aa		0.85	□□□□□ -2.27
NBP1	YLR457C	GIM3	P53900	129 aa		0.85	□□□□□ -2.27
NBP1	YLR457C	COG5	P53951	403 aa		0.85	□□□□□ -2.27
NBP1	YLR457C	YDR274C	P87283	123 aa		0.85	□□□□□ -2.27
NBP1	YLR457C	YDR249C	Q03787	373 aa		0.85	□□□□□ -2.27
NBP1	YLR457C	ARO80	Q04052	950 aa		0.85	□□□□□ -2.27
NBP1	YLR457C	SPA2	P23201	1466 aa	Known RBP	0.85	□□□□□ -2.27
NBP1	YLR457C	RPL25	P04456	142 aa	Known RBP	0.84	□□□□□ -2.27
NBP1	YLR457C	TRM5	P38793	499 aa		0.84	□□□□□ -2.27
NBP1	YLR457C	ERG10	P41338	398 aa	Known RBP	0.84	□□□□□ -2.27
NBP1	YLR457C	YAE1	P47118	141 aa	Predicted RBP	0.84	□□□□□ -2.27
NBP1	YLR457C	YJR111C	P47148	283 aa	Known RBP	0.84	□□□□□ -2.27
NBP1	YLR457C	SNO1	Q03144	224 aa		0.84	□□□□□ -2.27
NBP1	YLR457C	ATG38	Q05789	226 aa	Known RBP	0.84	□□□□□ -2.27
NBP1	YLR457C	GRX8	Q05926	109 aa		0.84	□□□□□ -2.27
NBP1	YLR457C	BRX1	Q08235	291 aa	Known RBP	0.84	□□□□□ -2.27
NBP1	YLR457C	MDM32	Q12171	622 aa		0.84	□□□□□ -2.27
NBP1	YLR457C	IGO2	Q9P305	131 aa		0.84	□□□□□ -2.27
NBP1	YLR457C	IKI3	Q06706	1349 aa	Known RBP	0.84	□□□□□ -2.28
NBP1	YLR457C	YHR212W-A	P0CX91	67 aa		0.83	□□□□□ -2.28
NBP1	YLR457C	RPB3	P16370	318 aa	Known RBP	0.83	□□□□□ -2.28
NBP1	YLR457C	BET1	P22804	142 aa		0.83	□□□□□ -2.28
NBP1	YLR457C	TAH1	P25638	111 aa	Predicted RBP	0.83	□□□□□ -2.28
NBP1	YLR457C	YKR041W	P36134	250 aa		0.83	□□□□□ -2.28
NBP1	YLR457C	SKG1	P36169	355 aa		0.83	□□□□□ -2.28

Retrieved 100 of 5,963 RNA–protein pairs in 35 ms