RNA–Protein interactions for RNA: YLR268W

SEC22, Transcript of R-SNARE protein, yeastyeast

Gene SEC22, Length 645 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC22YLR268W CGR1P53188 120 aa1.1□□□□□ -2.23
SEC22YLR268W SAY1P53324 424 aa1.1□□□□□ -2.23
SEC22YLR268W CUS2P53830 285 aaPredicted RBP1.1□□□□□ -2.23
SEC22YLR268W COG5P53951 403 aa1.1□□□□□ -2.23
SEC22YLR268W YLR162WQ06235 118 aa1.1□□□□□ -2.23
SEC22YLR268W ANT1Q06497 328 aa1.1□□□□□ -2.23
SEC22YLR268W FSF1Q12029 327 aaKnown RBP1.1□□□□□ -2.23
SEC22YLR268W YFR032C-BQ8TGU2 87 aa1.1□□□□□ -2.23
SEC22YLR268W IKI3Q06706 1349 aaKnown RBP1.1□□□□□ -2.23
SEC22YLR268W CBF1P17106 351 aa1.09□□□□□ -2.23
SEC22YLR268W CKS1P20486 150 aaKnown RBP1.09□□□□□ -2.23
SEC22YLR268W YGL010WP25338 174 aa1.09□□□□□ -2.23
SEC22YLR268W TMA19P35691 167 aaKnown RBP1.09□□□□□ -2.23
SEC22YLR268W SHE2P36068 246 aaKnown RBP RIP-Chip data1.09□□□□□ -2.23not detected
SEC22YLR268W GET1P53192 235 aa1.09□□□□□ -2.23
SEC22YLR268W YDR274CP87283 123 aa1.09□□□□□ -2.23
SEC22YLR268W CSI2Q08054 341 aa1.09□□□□□ -2.23
SEC22YLR268W YNG1Q08465 219 aa1.09□□□□□ -2.23
SEC22YLR268W ADF1Q2V2Q1 113 aa1.09□□□□□ -2.23
SEC22YLR268W ATG40Q99325 256 aa1.09□□□□□ -2.23
SEC22YLR268W MATALPHA2P0CY08 210 aa1.08□□□□□ -2.24
SEC22YLR268W HMLALPHA2P0CY09 210 aa1.08□□□□□ -2.24
SEC22YLR268W TFC1P32367 649 aa1.08□□□□□ -2.24
SEC22YLR268W YBR220CP38318 560 aa1.08□□□□□ -2.24
SEC22YLR268W RPL13BP40212 199 aaKnown RBP1.08□□□□□ -2.24
SEC22YLR268W AIM25P47140 327 aa1.08□□□□□ -2.24
SEC22YLR268W MRPS17Q03246 237 aaPredicted RBP1.08□□□□□ -2.24
SEC22YLR268W YOL160WQ08321 113 aa1.08□□□□□ -2.24
SEC22YLR268W GET4Q12125 312 aa1.08□□□□□ -2.24
SEC22YLR268W RPL13AQ12690 199 aaPredicted RBP1.08□□□□□ -2.24
SEC22YLR268W SIR2P06700 562 aa1.07□□□□□ -2.24
SEC22YLR268W RPL2AP0CX45 254 aaKnown RBP1.07□□□□□ -2.24
SEC22YLR268W RPL2BP0CX46 254 aaKnown RBP1.07□□□□□ -2.24
SEC22YLR268W ATP15P21306 62 aa1.07□□□□□ -2.24
SEC22YLR268W YBR209WP38311 105 aa1.07□□□□□ -2.24
SEC22YLR268W GLE2P40066 365 aa1.07□□□□□ -2.24
SEC22YLR268W ERJ5P43613 295 aaPredicted RBP1.07□□□□□ -2.24
SEC22YLR268W MMS2P53152 137 aa1.07□□□□□ -2.24
SEC22YLR268W MZM1Q03429 123 aaPredicted RBP1.07□□□□□ -2.24
SEC22YLR268W GGA1Q06336 557 aa1.07□□□□□ -2.24
SEC22YLR268W ABP140Q08641 628 aaKnown RBP1.07□□□□□ -2.24
SEC22YLR268W YCL012CQ8J0M4 134 aa1.07□□□□□ -2.24
SEC22YLR268W YLR236CA0A023PZG4 107 aa1.06□□□□□ -2.24
SEC22YLR268W CPA1P07258 411 aaKnown RBP1.06□□□□□ -2.24
SEC22YLR268W FPR1P20081 114 aaKnown RBP1.06□□□□□ -2.24
SEC22YLR268W UPS2P35200 230 aa1.06□□□□□ -2.24
SEC22YLR268W ERG10P41338 398 aaKnown RBP1.06□□□□□ -2.24
SEC22YLR268W NOP19P53317 196 aaPredicted RBP1.06□□□□□ -2.24
SEC22YLR268W HNT1Q04344 158 aaKnown RBP1.06□□□□□ -2.24
SEC22YLR268W JIP3O13555 125 aa1.05□□□□□ -2.24
SEC22YLR268W MRS1P07266 363 aa1.05□□□□□ -2.24
SEC22YLR268W QCR8P08525 94 aa1.05□□□□□ -2.24
SEC22YLR268W RPL27AP0C2H6 136 aaKnown RBP1.05□□□□□ -2.24
SEC22YLR268W GPA2P10823 449 aa1.05□□□□□ -2.24
SEC22YLR268W YCR090CP25654 182 aaKnown RBP1.05□□□□□ -2.24
SEC22YLR268W OCH1P31755 480 aa1.05□□□□□ -2.24
SEC22YLR268W ASF2P32448 525 aaPredicted RBP1.05□□□□□ -2.24
SEC22YLR268W KDX1P36005 433 aa1.05□□□□□ -2.24
SEC22YLR268W TVP38P36164 337 aa1.05□□□□□ -2.24
SEC22YLR268W OPY1P38271 328 aa1.05□□□□□ -2.24
SEC22YLR268W KNH1P50112 268 aa1.05□□□□□ -2.24
SEC22YLR268W POP3P53833 195 aaPredicted RBP1.05□□□□□ -2.24
SEC22YLR268W NUP49Q02199 472 aa1.05□□□□□ -2.24
SEC22YLR268W CUE4Q04201 117 aaPredicted RBP1.05□□□□□ -2.24
SEC22YLR268W FUS2Q05670 677 aa1.05□□□□□ -2.24
SEC22YLR268W RIO1Q12196 484 aaKnown RBP1.05□□□□□ -2.24
SEC22YLR268W YDL180WQ12301 547 aa1.05□□□□□ -2.24
SEC22YLR268W ODC2Q99297 307 aa1.05□□□□□ -2.24
SEC22YLR268W MBF1O14467 151 aaKnown RBP1.04□□□□□ -2.24
SEC22YLR268W QCR7P00128 127 aa1.04□□□□□ -2.24
SEC22YLR268W SEC11P15367 167 aa1.04□□□□□ -2.24
SEC22YLR268W CNB1P25296 175 aa1.04□□□□□ -2.24
SEC22YLR268W PAN3P36102 679 aaPredicted RBP1.04□□□□□ -2.24
SEC22YLR268W AIM2P39721 246 aa1.04□□□□□ -2.24
SEC22YLR268W SKI6P46948 246 aaPredicted RBP1.04□□□□□ -2.24
SEC22YLR268W RAD28Q12021 506 aa1.04□□□□□ -2.24
SEC22YLR268W POR1P04840 283 aaKnown RBP1.03□□□□□ -2.24
SEC22YLR268W YPK2P18961 677 aa1.03□□□□□ -2.24
SEC22YLR268W YER034WP40022 185 aaKnown RBP1.03□□□□□ -2.24
SEC22YLR268W IGO2Q9P305 131 aa1.03□□□□□ -2.24
SEC22YLR268W RAD9P14737 1309 aa1.03□□□□□ -2.24
SEC22YLR268W SPO13P23624 291 aa1.02□□□□□ -2.25
SEC22YLR268W ECM4P36156 370 aa1.02□□□□□ -2.25
SEC22YLR268W TVP23P38962 199 aa1.02□□□□□ -2.25
SEC22YLR268W YEA4P40004 342 aa1.02□□□□□ -2.25
SEC22YLR268W YER134CP40081 178 aa1.02□□□□□ -2.25
SEC22YLR268W SER2P42941 309 aa1.02□□□□□ -2.25
SEC22YLR268W ARP3P47117 449 aaKnown RBP1.02□□□□□ -2.25
SEC22YLR268W MPC3P53311 146 aa1.02□□□□□ -2.25
SEC22YLR268W MPA43P53583 542 aaPredicted RBP1.02□□□□□ -2.25
SEC22YLR268W RTC4P53850 401 aa1.02□□□□□ -2.25
SEC22YLR268W GRX3Q03835 250 aa1.02□□□□□ -2.25
SEC22YLR268W DYN3Q04949 312 aa1.02□□□□□ -2.25
SEC22YLR268W UBR2Q07963 1872 aa1.01□□□□□ -2.25
SEC22YLR268W SNF4P12904 322 aa1.01□□□□□ -2.25
SEC22YLR268W VMA22P38784 181 aa1.01□□□□□ -2.25
SEC22YLR268W YER076CP40049 302 aa1.01□□□□□ -2.25
SEC22YLR268W ARO8P53090 500 aaKnown RBP1.01□□□□□ -2.25
SEC22YLR268W YNL184CP53876 108 aa1.01□□□□□ -2.25
SEC22YLR268W YPR174CQ06616 221 aaPredicted RBP1.01□□□□□ -2.25
Retrieved 100 of 5,963 RNA–protein pairs in 42.7 ms