RNA–Protein interactions for RNA: YLR221C

RSA3, Transcript of Protein with a likely role in ribosomal maturation, yeastyeast

Gene RSA3, Length 663 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RSA3YLR221C GLE2P40066 365 aa3.36□□□□□ -1.87
RSA3YLR221C GVP36P40531 326 aaKnown RBP3.36□□□□□ -1.87
RSA3YLR221C YJL027CP47063 138 aaPredicted RBP3.36□□□□□ -1.87
RSA3YLR221C IGO2Q9P305 131 aa3.36□□□□□ -1.87
RSA3YLR221C CNB1P25296 175 aa3.35□□□□□ -1.87
RSA3YLR221C PDS1P40316 373 aaPredicted RBP3.35□□□□□ -1.87
RSA3YLR221C TIR3P40552 269 aa3.35□□□□□ -1.87
RSA3YLR221C DOC1P53068 250 aa3.35□□□□□ -1.87
RSA3YLR221C YET1P35723 206 aa3.34□□□□□ -1.87
RSA3YLR221C SVP26P38869 228 aa3.34□□□□□ -1.87
RSA3YLR221C EGD2P38879 174 aaKnown RBP3.34□□□□□ -1.87
RSA3YLR221C SEC72P39742 193 aaKnown RBP3.34□□□□□ -1.87
RSA3YLR221C ERG10P41338 398 aaKnown RBP3.34□□□□□ -1.87
RSA3YLR221C HNT1Q04344 158 aaKnown RBP3.34□□□□□ -1.87
RSA3YLR221C RIO1Q12196 484 aaKnown RBP3.34□□□□□ -1.87
RSA3YLR221C FKS1P38631 1876 aaKnown RBP3.33□□□□□ -1.88
RSA3YLR221C MBF1O14467 151 aaKnown RBP3.33□□□□□ -1.88
RSA3YLR221C YHR022CP38763 256 aa3.33□□□□□ -1.88
RSA3YLR221C YNL184CP53876 108 aa3.33□□□□□ -1.88
RSA3YLR221C ARO80Q04052 950 aa3.33□□□□□ -1.88
RSA3YLR221C SNF4P12904 322 aa3.32□□□□□ -1.88
RSA3YLR221C CYT2Q00873 224 aa3.32□□□□□ -1.88
RSA3YLR221C NOC4Q06512 552 aaPredicted RBP3.32□□□□□ -1.88
RSA3YLR221C YLR036CQ07986 203 aa3.32□□□□□ -1.88
RSA3YLR221C YOL024WQ08172 172 aa3.32□□□□□ -1.88
RSA3YLR221C BOL1Q3E793 110 aa3.32□□□□□ -1.88
RSA3YLR221C YDL085C-AQ3E7B7 68 aaKnown RBP3.32□□□□□ -1.88
RSA3YLR221C ATP15P21306 62 aa3.31□□□□□ -1.88
RSA3YLR221C YBR285WP38354 144 aa3.31□□□□□ -1.88
RSA3YLR221C AIM2P39721 246 aa3.31□□□□□ -1.88
RSA3YLR221C FCY21P40039 528 aa3.31□□□□□ -1.88
RSA3YLR221C BOL2P53082 120 aa3.31□□□□□ -1.88
RSA3YLR221C RAS2P01120 322 aaKnown RBP3.3□□□□□ -1.88
RSA3YLR221C TAH1P25638 111 aaPredicted RBP3.3□□□□□ -1.88
RSA3YLR221C YCR090CP25654 182 aaKnown RBP3.3□□□□□ -1.88
RSA3YLR221C YNL217WP40152 326 aa3.3□□□□□ -1.88
RSA3YLR221C YDR274CP87283 123 aa3.3□□□□□ -1.88
RSA3YLR221C FSF1Q12029 327 aaKnown RBP3.3□□□□□ -1.88
RSA3YLR221C DDI2P0CH63 225 aa3.29□□□□□ -1.88
RSA3YLR221C DDI3P0CH64 225 aa3.29□□□□□ -1.88
RSA3YLR221C DSE2P38844 325 aa3.29□□□□□ -1.88
RSA3YLR221C AGE2P40529 298 aa3.29□□□□□ -1.88
RSA3YLR221C SKI6P46948 246 aaPredicted RBP3.29□□□□□ -1.88
RSA3YLR221C ARP3P47117 449 aaKnown RBP3.29□□□□□ -1.88
RSA3YLR221C EAF6P47128 113 aa3.29□□□□□ -1.88
RSA3YLR221C UBC12P52491 188 aa3.29□□□□□ -1.88
RSA3YLR221C NRK1P53915 240 aa3.29□□□□□ -1.88
RSA3YLR221C YLR031WQ07978 186 aa3.29□□□□□ -1.88
RSA3YLR221C YHR086W-AQ3E746 53 aa3.29□□□□□ -1.88
RSA3YLR221C SHE2P36068 246 aaKnown RBP RIP-Chip data3.28□□□□□ -1.88not detected
RSA3YLR221C VTC1P40046 129 aaRIP-Chip data3.28□□□□□ -1.88not detected
RSA3YLR221C POG1P40473 351 aa3.28□□□□□ -1.88
RSA3YLR221C TRX3P25372 127 aa3.27□□□□□ -1.89
RSA3YLR221C OCH1P31755 480 aa3.27□□□□□ -1.89
RSA3YLR221C PEP8P40335 379 aa3.27□□□□□ -1.89
RSA3YLR221C SNO1Q03144 224 aa3.27□□□□□ -1.89
RSA3YLR221C ODC2Q99297 307 aa3.27□□□□□ -1.89
RSA3YLR221C MDH2P22133 377 aa3.26□□□□□ -1.89
RSA3YLR221C AYR1P40471 297 aa3.26□□□□□ -1.89
RSA3YLR221C ARO8P53090 500 aaKnown RBP3.26□□□□□ -1.89
RSA3YLR221C YNR077CP53758 84 aa3.26□□□□□ -1.89
RSA3YLR221C GRX8Q05926 109 aa3.26□□□□□ -1.89
RSA3YLR221C DGA1Q08650 418 aa3.26□□□□□ -1.89
RSA3YLR221C GCY1P14065 312 aaKnown RBP RIP-Chip data3.25□□□□□ -1.89not detected
RSA3YLR221C TRR1P29509 319 aaKnown RBP3.25□□□□□ -1.89
RSA3YLR221C FZF1P32805 299 aa3.25□□□□□ -1.89
RSA3YLR221C OPY1P38271 328 aa3.25□□□□□ -1.89
RSA3YLR221C DYN3Q04949 312 aa3.25□□□□□ -1.89
RSA3YLR221C KDX1P36005 433 aa3.24□□□□□ -1.89
RSA3YLR221C SER2P42941 309 aa3.24□□□□□ -1.89
RSA3YLR221C TMA22P47089 198 aaPredicted RBP3.24□□□□□ -1.89
RSA3YLR221C NUP49Q02199 472 aa3.24□□□□□ -1.89
RSA3YLR221C ATG40Q99325 256 aa3.24□□□□□ -1.89
RSA3YLR221C CPA1P07258 411 aaKnown RBP3.23□□□□□ -1.89
RSA3YLR221C PAN3P36102 679 aaPredicted RBP3.23□□□□□ -1.89
RSA3YLR221C YEA4P40004 342 aa3.23□□□□□ -1.89
RSA3YLR221C YER134CP40081 178 aa3.23□□□□□ -1.89
RSA3YLR221C FMP32P43557 207 aa3.23□□□□□ -1.89
RSA3YLR221C BUD25P85052 153 aa3.23□□□□□ -1.89
RSA3YLR221C SML1Q04964 104 aa3.23□□□□□ -1.89
RSA3YLR221C PDR18P53756 1333 aa3.22□□□□□ -1.89
RSA3YLR221C MET5P47169 1442 aa3.22□□□□□ -1.89
RSA3YLR221C VPS51P36116 164 aa3.22□□□□□ -1.89
RSA3YLR221C YBR209WP38311 105 aa3.22□□□□□ -1.89
RSA3YLR221C GRE1Q08969 168 aa3.22□□□□□ -1.89
RSA3YLR221C YIL177CP40434 1758 aa3.21□□□□□ -1.9
RSA3YLR221C YJL225CP40889 1758 aa3.21□□□□□ -1.9
RSA3YLR221C MGT1P26188 188 aa3.21□□□□□ -1.9
RSA3YLR221C YJR111CP47148 283 aaKnown RBP3.21□□□□□ -1.9
RSA3YLR221C SAY1P53324 424 aa3.21□□□□□ -1.9
RSA3YLR221C AIM34Q03673 198 aa3.21□□□□□ -1.9
RSA3YLR221C GIM5Q04493 163 aa3.21□□□□□ -1.9
RSA3YLR221C YMR315WQ04869 349 aaKnown RBP3.21□□□□□ -1.9
RSA3YLR221C CMC2Q3E7A4 109 aa3.21□□□□□ -1.9
RSA3YLR221C YPR014CQ6B0W2 109 aa3.21□□□□□ -1.9
RSA3YLR221C FMP23P38231 175 aa3.2□□□□□ -1.9
RSA3YLR221C SRP14P38985 146 aa3.2□□□□□ -1.9
RSA3YLR221C GAA1P39012 614 aa3.2□□□□□ -1.9
RSA3YLR221C AVT2P39981 480 aa3.2□□□□□ -1.9
RSA3YLR221C YER034WP40022 185 aaKnown RBP3.2□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 28.4 ms