RNA–Protein interactions for RNA: YIR043C

YIR043C, Transcript of Possible pseudogene in strain S288C, yeastyeast

Gene YIR043C, Length 693 nt, Biotype pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YIR043CYIR043C YIP3P53633 176 aa3.42□□□□□ -1.86
YIR043CYIR043C FUS2Q05670 677 aa3.42□□□□□ -1.86
YIR043CYIR043C CKS1P20486 150 aaKnown RBP3.41□□□□□ -1.86
YIR043CYIR043C CNB1P25296 175 aa3.41□□□□□ -1.86
YIR043CYIR043C ECM4P36156 370 aa3.41□□□□□ -1.86
YIR043CYIR043C MRPL17P36528 281 aa3.41□□□□□ -1.86
YIR043CYIR043C PGD1P40356 397 aa3.41□□□□□ -1.86
YIR043CYIR043C EMC6Q12431 108 aa3.41□□□□□ -1.86
YIR043CYIR043C RPL35AP0CX84 120 aaKnown RBP3.4□□□□□ -1.87
YIR043CYIR043C RPL35BP0CX85 120 aaKnown RBP3.4□□□□□ -1.87
YIR043CYIR043C MDH3P32419 343 aaKnown RBP RIP-Chip data3.4□□□□□ -1.87not detected
YIR043CYIR043C YOR062CP36025 268 aa3.4□□□□□ -1.87
YIR043CYIR043C VPS51P36116 164 aa3.4□□□□□ -1.87
YIR043CYIR043C UBC12P52491 188 aa3.4□□□□□ -1.87
YIR043CYIR043C RIO1Q12196 484 aaKnown RBP3.4□□□□□ -1.87
YIR043CYIR043C SNF4P12904 322 aa3.39□□□□□ -1.87
YIR043CYIR043C TRR1P29509 319 aaKnown RBP3.39□□□□□ -1.87
YIR043CYIR043C MRPS8Q03799 155 aa3.39□□□□□ -1.87
YIR043CYIR043C HNT1Q04344 158 aaKnown RBP3.39□□□□□ -1.87
YIR043CYIR043C YDL085C-AQ3E7B7 68 aaKnown RBP3.39□□□□□ -1.87
YIR043CYIR043C ATP15P21306 62 aa3.38□□□□□ -1.87
YIR043CYIR043C MEI4P29467 408 aa3.38□□□□□ -1.87
YIR043CYIR043C BRX1Q08235 291 aaKnown RBP3.38□□□□□ -1.87
YIR043CYIR043C YCR090CP25654 182 aaKnown RBP3.37□□□□□ -1.87
YIR043CYIR043C ICE2P40499 491 aa3.37□□□□□ -1.87
YIR043CYIR043C GVP36P40531 326 aaKnown RBP3.37□□□□□ -1.87
YIR043CYIR043C RPL33BP41056 107 aaKnown RBP3.37□□□□□ -1.87
YIR043CYIR043C ARP3P47117 449 aaKnown RBP3.37□□□□□ -1.87
YIR043CYIR043C ARO8P53090 500 aaKnown RBP3.37□□□□□ -1.87
YIR043CYIR043C YDR274CP87283 123 aa3.37□□□□□ -1.87
YIR043CYIR043C RGM1Q00453 211 aa3.37□□□□□ -1.87
YIR043CYIR043C QCR6P00127 147 aa3.36□□□□□ -1.87
YIR043CYIR043C PET9P18239 318 aaKnown RBP3.36□□□□□ -1.87
YIR043CYIR043C PEX4P29340 183 aa3.36□□□□□ -1.87
YIR043CYIR043C ERV15P38312 142 aa3.36□□□□□ -1.87
YIR043CYIR043C YNR062CP53748 327 aa3.36□□□□□ -1.87
YIR043CYIR043C YLR460CP54007 376 aa3.36□□□□□ -1.87
YIR043CYIR043C DGA1Q08650 418 aa3.36□□□□□ -1.87
YIR043CYIR043C YKR041WP36134 250 aa3.35□□□□□ -1.87
YIR043CYIR043C UMP1P38293 148 aa3.35□□□□□ -1.87
YIR043CYIR043C AIM2P39721 246 aa3.35□□□□□ -1.87
YIR043CYIR043C EAF6P47128 113 aa3.35□□□□□ -1.87
YIR043CYIR043C YJR111CP47148 283 aaKnown RBP3.35□□□□□ -1.87
YIR043CYIR043C PHO88P38264 188 aaPredicted RBP3.34□□□□□ -1.87
YIR043CYIR043C YER076CP40049 302 aa3.34□□□□□ -1.87
YIR043CYIR043C AIM34Q03673 198 aa3.34□□□□□ -1.87
YIR043CYIR043C SMD2Q06217 110 aaKnown RBP3.34□□□□□ -1.87
YIR043CYIR043C YLR031WQ07978 186 aa3.34□□□□□ -1.87
YIR043CYIR043C RPS24AP0CX31 135 aaKnown RBP3.33□□□□□ -1.88
YIR043CYIR043C RPS24BP0CX32 135 aaKnown RBP3.33□□□□□ -1.88
YIR043CYIR043C SNC2P33328 115 aa3.33□□□□□ -1.88
YIR043CYIR043C YKE4P40544 346 aa3.33□□□□□ -1.88
YIR043CYIR043C DOC1P53068 250 aa3.33□□□□□ -1.88
YIR043CYIR043C CGI121Q03705 181 aaKnown RBP3.33□□□□□ -1.88
YIR043CYIR043C MEU1Q07938 337 aaKnown RBP RIP-Chip data3.33□□□□□ -1.88not detected
YIR043CYIR043C SCL1P21243 252 aaKnown RBP3.32□□□□□ -1.88
YIR043CYIR043C MGT1P26188 188 aa3.32□□□□□ -1.88
YIR043CYIR043C OCH1P31755 480 aa3.32□□□□□ -1.88
YIR043CYIR043C ARC19P33204 171 aaKnown RBP3.32□□□□□ -1.88
YIR043CYIR043C YET1P35723 206 aa3.32□□□□□ -1.88
YIR043CYIR043C SKI6P46948 246 aaPredicted RBP3.32□□□□□ -1.88
YIR043CYIR043C DAN1P47178 298 aa3.32□□□□□ -1.88
YIR043CYIR043C YNL140CP53910 189 aa3.32□□□□□ -1.88
YIR043CYIR043C DAD3P69850 94 aa3.32□□□□□ -1.88
YIR043CYIR043C AHC2P25649 128 aa3.31□□□□□ -1.88
YIR043CYIR043C OPY1P38271 328 aa3.31□□□□□ -1.88
YIR043CYIR043C TIR3P40552 269 aa3.31□□□□□ -1.88
YIR043CYIR043C YNL247WP53852 767 aaKnown RBP3.31□□□□□ -1.88
YIR043CYIR043C YMR315WQ04869 349 aaKnown RBP3.31□□□□□ -1.88
YIR043CYIR043C YOL014WQ08110 124 aa3.31□□□□□ -1.88
YIR043CYIR043C YOR283WQ12040 230 aaKnown RBP3.31□□□□□ -1.88
YIR043CYIR043C CLG1P35190 452 aa3.3□□□□□ -1.88
YIR043CYIR043C YEA4P40004 342 aa3.3□□□□□ -1.88
YIR043CYIR043C LSM4P40070 187 aaKnown RBP3.3□□□□□ -1.88
YIR043CYIR043C YER121WP40076 114 aa3.3□□□□□ -1.88
YIR043CYIR043C SER2P42941 309 aa3.3□□□□□ -1.88
YIR043CYIR043C FMP32P43557 207 aa3.3□□□□□ -1.88
YIR043CYIR043C YJL027CP47063 138 aaPredicted RBP3.3□□□□□ -1.88
YIR043CYIR043C JAC1P53193 184 aa3.3□□□□□ -1.88
YIR043CYIR043C YNR077CP53758 84 aa3.3□□□□□ -1.88
YIR043CYIR043C RAS2P01120 322 aaKnown RBP3.29□□□□□ -1.88
YIR043CYIR043C MAK5P38112 773 aaPredicted RBP3.29□□□□□ -1.88
YIR043CYIR043C YBR285WP38354 144 aa3.29□□□□□ -1.88
YIR043CYIR043C NVJ1P38881 321 aa3.29□□□□□ -1.88
YIR043CYIR043C ERG25P53045 309 aa3.29□□□□□ -1.88
YIR043CYIR043C CYT2Q00873 224 aa3.29□□□□□ -1.88
YIR043CYIR043C SHH4Q06236 168 aa3.29□□□□□ -1.88
YIR043CYIR043C YPR014CQ6B0W2 109 aa3.29□□□□□ -1.88
YIR043CYIR043C CPA1P07258 411 aaKnown RBP3.28□□□□□ -1.88
YIR043CYIR043C SEC14P24280 304 aaKnown RBP3.28□□□□□ -1.88
YIR043CYIR043C PAN3P36102 679 aaPredicted RBP3.28□□□□□ -1.88
YIR043CYIR043C YHR022CP38763 256 aa3.28□□□□□ -1.88
YIR043CYIR043C AVT2P39981 480 aa3.28□□□□□ -1.88
YIR043CYIR043C BOL2P53082 120 aa3.28□□□□□ -1.88
YIR043CYIR043C FSF1Q12029 327 aaKnown RBP3.28□□□□□ -1.88
YIR043CYIR043C PEX11Q12462 236 aa3.28□□□□□ -1.88
YIR043CYIR043C YML100W-AQ8TGT0 57 aa3.28□□□□□ -1.88
YIR043CYIR043C YNL217WP40152 326 aa3.27□□□□□ -1.89
YIR043CYIR043C YLR050CQ12155 161 aaKnown RBP3.27□□□□□ -1.89
YIR043CYIR043C ODC2Q99297 307 aa3.27□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 21.6 ms