RNA–Protein interactions for RNA: YIL056W

VHR1, Transcript of Transcriptional activator, yeastyeast

Gene VHR1, Length 1,923 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VHR1YIL056W YKL102CP34249 101 aa2.18□□□□□ -2.06
VHR1YIL056W POP4P38336 279 aa2.18□□□□□ -2.06
VHR1YIL056W YEA4P40004 342 aa2.18□□□□□ -2.06
VHR1YIL056W HMF1P40037 129 aaKnown RBP2.18□□□□□ -2.06
VHR1YIL056W SDS23P53172 527 aa2.18□□□□□ -2.06
VHR1YIL056W LSM3P57743 89 aaKnown RBP2.18□□□□□ -2.06
VHR1YIL056W PRP11Q07350 266 aaPredicted RBP2.18□□□□□ -2.06
VHR1YIL056W DGA1Q08650 418 aa2.18□□□□□ -2.06
VHR1YIL056W IPP1P00817 287 aaKnown RBP2.17□□□□□ -2.06
VHR1YIL056W RPS1BP23248 255 aaKnown RBP2.17□□□□□ -2.06
VHR1YIL056W MRP49P32388 137 aa2.17□□□□□ -2.06
VHR1YIL056W POP8P38208 133 aa2.17□□□□□ -2.06
VHR1YIL056W YHI9P38765 294 aa2.17□□□□□ -2.06
VHR1YIL056W FCY21P40039 528 aa2.17□□□□□ -2.06
VHR1YIL056W PGD1P40356 397 aa2.17□□□□□ -2.06
VHR1YIL056W APQ12P40532 138 aa2.17□□□□□ -2.06
VHR1YIL056W ERJ5P43613 295 aaPredicted RBP2.17□□□□□ -2.06
VHR1YIL056W SOL1P50278 321 aa2.17□□□□□ -2.06
VHR1YIL056W YGL101WP53144 215 aa2.17□□□□□ -2.06
VHR1YIL056W YGR050CP53231 118 aa2.17□□□□□ -2.06
VHR1YIL056W YPL113CQ02961 396 aa2.17□□□□□ -2.06
VHR1YIL056W INP1Q03694 420 aa2.17□□□□□ -2.06
VHR1YIL056W YDR278CQ05612 105 aa2.17□□□□□ -2.06
VHR1YIL056W YPR195CQ06594 109 aa2.17□□□□□ -2.06
VHR1YIL056W PRR2Q12310 699 aa2.17□□□□□ -2.06
VHR1YIL056W ATP14Q12349 124 aa2.17□□□□□ -2.06
VHR1YIL056W NUP157P40064 1391 aaKnown RBP2.17□□□□□ -2.06
VHR1YIL056W PDR18P53756 1333 aa2.17□□□□□ -2.06
VHR1YIL056W CDC7P06243 507 aa2.17□□□□□ -2.06
VHR1YIL056W MAG1P22134 296 aaKnown RBP2.17□□□□□ -2.06
VHR1YIL056W CNB1P25296 175 aa2.17□□□□□ -2.06
VHR1YIL056W BUD23P25627 275 aaPredicted RBP2.17□□□□□ -2.06
VHR1YIL056W EDC2P40023 145 aaPredicted RBP2.17□□□□□ -2.06
VHR1YIL056W CAT5P41735 233 aa2.17□□□□□ -2.06
VHR1YIL056W MNN5P46982 586 aa2.17□□□□□ -2.06
VHR1YIL056W MDM34P53083 459 aa2.17□□□□□ -2.06
VHR1YIL056W YNL010WP53981 241 aaKnown RBP2.17□□□□□ -2.06
VHR1YIL056W YPL278CQ08990 100 aa2.17□□□□□ -2.06
VHR1YIL056W YOR342CQ12182 319 aa2.17□□□□□ -2.06
VHR1YIL056W YPS3Q12303 508 aa2.17□□□□□ -2.06
VHR1YIL056W YIR021W-AQ3E739 70 aa2.17□□□□□ -2.06
VHR1YIL056W YBL112CQ3E7Y4 105 aa2.17□□□□□ -2.06
VHR1YIL056W MBF1O14467 151 aaKnown RBP2.16□□□□□ -2.06
VHR1YIL056W SPO13P23624 291 aa2.16□□□□□ -2.06
VHR1YIL056W LHP1P33399 275 aaKnown RBP2.16□□□□□ -2.06
VHR1YIL056W SHE2P36068 246 aaKnown RBP RIP-Chip data2.16□□□□□ -2.06not detected
VHR1YIL056W MRPL24P36525 258 aaPredicted RBP2.16□□□□□ -2.06
VHR1YIL056W YHL044WP38727 235 aa2.16□□□□□ -2.06
VHR1YIL056W VMA7P39111 118 aa2.16□□□□□ -2.06
VHR1YIL056W ARP3P47117 449 aaKnown RBP2.16□□□□□ -2.06
VHR1YIL056W ILM1P47155 203 aa2.16□□□□□ -2.06
VHR1YIL056W ARO8P53090 500 aaKnown RBP2.16□□□□□ -2.06
VHR1YIL056W HHT1P61830 136 aa2.16□□□□□ -2.06
VHR1YIL056W MPD1Q12404 318 aaKnown RBP2.16□□□□□ -2.06
VHR1YIL056W YBL008W-AQ3E821 79 aa2.16□□□□□ -2.06
VHR1YIL056W STP22P25604 385 aa2.15□□□□□ -2.06
VHR1YIL056W IMP1P28627 190 aa2.15□□□□□ -2.06
VHR1YIL056W MRPL17P36528 281 aa2.15□□□□□ -2.06
VHR1YIL056W RFC2P40348 353 aa2.15□□□□□ -2.06
VHR1YIL056W BUD13P46947 266 aaPredicted RBP2.15□□□□□ -2.06
VHR1YIL056W ORM1P53224 222 aa2.15□□□□□ -2.06
VHR1YIL056W FMP48P53233 369 aa2.15□□□□□ -2.06
VHR1YIL056W PGA1P53896 198 aa2.15□□□□□ -2.06
VHR1YIL056W COF1Q03048 143 aaKnown RBP2.15□□□□□ -2.06
VHR1YIL056W NKP2Q06162 153 aa2.15□□□□□ -2.06
VHR1YIL056W CNL1Q06333 122 aa2.15□□□□□ -2.06
VHR1YIL056W IES3Q12345 250 aa2.15□□□□□ -2.06
VHR1YIL056W GEP5Q12393 293 aa2.15□□□□□ -2.06
VHR1YIL056W TSC3Q3E790 80 aa2.15□□□□□ -2.06
VHR1YIL056W BUD4P47136 1447 aa2.15□□□□□ -2.07
VHR1YIL056W TY1B-HO13535 1793 aa2.15□□□□□ -2.07
VHR1YIL056W RPL30P14120 105 aaKnown RBP2.15□□□□□ -2.07
VHR1YIL056W RPC19P28000 142 aaKnown RBP2.15□□□□□ -2.07
VHR1YIL056W RPS20P38701 121 aaKnown RBP2.15□□□□□ -2.07
VHR1YIL056W MED6P38782 295 aa2.15□□□□□ -2.07
VHR1YIL056W YPL073CP40323 161 aa2.15□□□□□ -2.07
VHR1YIL056W YIL054WP40524 105 aa2.15□□□□□ -2.07
VHR1YIL056W YIL012WP40551 113 aa2.15□□□□□ -2.07
VHR1YIL056W ACT1P60010 375 aaKnown RBP2.15□□□□□ -2.07
VHR1YIL056W APS2Q00381 147 aa2.15□□□□□ -2.07
VHR1YIL056W CWC27Q02770 301 aa2.15□□□□□ -2.07
VHR1YIL056W YDL211CQ12121 372 aa2.15□□□□□ -2.07
VHR1YIL056W YAL063C-AQ3E791 96 aa2.15□□□□□ -2.07
VHR1YIL056W YIL177CP40434 1758 aa2.15□□□□□ -2.07
VHR1YIL056W YJL225CP40889 1758 aa2.15□□□□□ -2.07
VHR1YIL056W PET9P18239 318 aaKnown RBP2.14□□□□□ -2.07
VHR1YIL056W PRE7P23724 241 aaKnown RBP2.14□□□□□ -2.07
VHR1YIL056W RSA4P25382 515 aaKnown RBP2.14□□□□□ -2.07
VHR1YIL056W SUI1P32911 108 aaKnown RBP2.14□□□□□ -2.07
VHR1YIL056W SFC1P33303 322 aa2.14□□□□□ -2.07
VHR1YIL056W PAN3P36102 679 aaPredicted RBP2.14□□□□□ -2.07
VHR1YIL056W CSH1P38287 376 aa2.14□□□□□ -2.07
VHR1YIL056W DLS1P40366 167 aa2.14□□□□□ -2.07
VHR1YIL056W YIL059CP40520 121 aa2.14□□□□□ -2.07
VHR1YIL056W OST2P46964 130 aa2.14□□□□□ -2.07
VHR1YIL056W CAB4P53332 305 aa2.14□□□□□ -2.07
VHR1YIL056W SLM2P53955 656 aa2.14□□□□□ -2.07
VHR1YIL056W THI74Q04083 370 aa2.14□□□□□ -2.07
VHR1YIL056W YPR011CQ12251 326 aa2.14□□□□□ -2.07
VHR1YIL056W YDL180WQ12301 547 aa2.14□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 79 ms