RNA–Protein interactions for RNA: YIL016W

SNL1, Transcript of Ribosome-associated protein, yeast

Gene SNL1, Length 480 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SNL1	YIL016W	ICE2	P40499	491 aa		3	□□□□□ -1.93
SNL1	YIL016W	MNN5	P46982	586 aa		3	□□□□□ -1.93
SNL1	YIL016W	SNX4	P47057	423 aa		3	□□□□□ -1.93
SNL1	YIL016W	ARP3	P47117	449 aa	Known RBP	3	□□□□□ -1.93
SNL1	YIL016W	ARO8	P53090	500 aa	Known RBP	3	□□□□□ -1.93
SNL1	YIL016W	JAC1	P53193	184 aa		3	□□□□□ -1.93
SNL1	YIL016W	SLM2	P53955	656 aa		3	□□□□□ -1.93
SNL1	YIL016W	AIM34	Q03673	198 aa		3	□□□□□ -1.93
SNL1	YIL016W	SPG3	Q04398	127 aa	Predicted RBP	3	□□□□□ -1.93
SNL1	YIL016W	SUE1	Q06524	206 aa		3	□□□□□ -1.93
SNL1	YIL016W	DGA1	Q08650	418 aa		3	□□□□□ -1.93
SNL1	YIL016W	NOP1	P15646	327 aa	Known RBP	2.99	□□□□□ -1.93
SNL1	YIL016W	AHC2	P25649	128 aa		2.99	□□□□□ -1.93
SNL1	YIL016W	MGT1	P26188	188 aa		2.99	□□□□□ -1.93
SNL1	YIL016W	CLG1	P35190	452 aa		2.99	□□□□□ -1.93
SNL1	YIL016W	FES1	P38260	290 aa		2.99	□□□□□ -1.93
SNL1	YIL016W	YJR111C	P47148	283 aa	Known RBP	2.99	□□□□□ -1.93
SNL1	YIL016W	SWP1	Q02795	286 aa		2.99	□□□□□ -1.93
SNL1	YIL016W	HNT1	Q04344	158 aa	Known RBP	2.99	□□□□□ -1.93
SNL1	YIL016W	ARR2	Q06597	130 aa		2.99	□□□□□ -1.93
SNL1	YIL016W	ATO3	Q12359	275 aa		2.99	□□□□□ -1.93
SNL1	YIL016W	PEX11	Q12462	236 aa		2.99	□□□□□ -1.93
SNL1	YIL016W	MRPL17	P36528	281 aa		2.98	□□□□□ -1.93
SNL1	YIL016W	SDH4	P37298	181 aa		2.98	□□□□□ -1.93
SNL1	YIL016W	YHL026C	P38740	315 aa		2.98	□□□□□ -1.93
SNL1	YIL016W	YJL144W	P47009	104 aa		2.98	□□□□□ -1.93
SNL1	YIL016W	AIF1	P52923	378 aa		2.98	□□□□□ -1.93
SNL1	YIL016W	YGL235W	P53071	178 aa		2.98	□□□□□ -1.93
SNL1	YIL016W	YPR096C	O13587	100 aa		2.97	□□□□□ -1.93
SNL1	YIL016W	RPL26A	P05743	127 aa	Known RBP	2.97	□□□□□ -1.93
SNL1	YIL016W	PET9	P18239	318 aa	Known RBP	2.97	□□□□□ -1.93
SNL1	YIL016W	ATP15	P21306	62 aa		2.97	□□□□□ -1.93
SNL1	YIL016W	MRPS28	P21771	286 aa		2.97	□□□□□ -1.93
SNL1	YIL016W	MAK5	P38112	773 aa	Predicted RBP	2.97	□□□□□ -1.93
SNL1	YIL016W	NVJ1	P38881	321 aa		2.97	□□□□□ -1.93
SNL1	YIL016W	LSM4	P40070	187 aa	Known RBP	2.97	□□□□□ -1.93
SNL1	YIL016W	RPL26B	P53221	127 aa	Known RBP	2.97	□□□□□ -1.93
SNL1	YIL016W	YDR274C	P87283	123 aa		2.97	□□□□□ -1.93
SNL1	YIL016W	YLR050C	Q12155	161 aa	Known RBP	2.97	□□□□□ -1.93
SNL1	YIL016W	TSC3	Q3E790	80 aa		2.97	□□□□□ -1.93
SNL1	YIL016W	SCO1	P23833	295 aa		2.96	□□□□□ -1.94
SNL1	YIL016W	MED6	P38782	295 aa		2.96	□□□□□ -1.94
SNL1	YIL016W	YHR180W	P38868	163 aa		2.96	□□□□□ -1.94
SNL1	YIL016W	AIM2	P39721	246 aa		2.96	□□□□□ -1.94
SNL1	YIL016W	PRM10	P42946	383 aa		2.96	□□□□□ -1.94
SNL1	YIL016W	FMP32	P43557	207 aa		2.96	□□□□□ -1.94
SNL1	YIL016W	SHH4	Q06236	168 aa		2.96	□□□□□ -1.94
SNL1	YIL016W	YLR031W	Q07978	186 aa		2.96	□□□□□ -1.94
SNL1	YIL016W	RPS28B	P0C0X0	67 aa	Known RBP	2.95	□□□□□ -1.94
SNL1	YIL016W	SEC14	P24280	304 aa	Known RBP	2.95	□□□□□ -1.94
SNL1	YIL016W	UBC6	P33296	250 aa	Predicted RBP	2.95	□□□□□ -1.94
SNL1	YIL016W	SPO73	P40031	143 aa		2.95	□□□□□ -1.94
SNL1	YIL016W	YGR219W	P53307	113 aa		2.95	□□□□□ -1.94
SNL1	YIL016W	NEJ1	Q06148	342 aa		2.95	□□□□□ -1.94
SNL1	YIL016W	YOL014W	Q08110	124 aa		2.95	□□□□□ -1.94
SNL1	YIL016W	RPS28A	Q3E7X9	67 aa	Predicted RBP	2.95	□□□□□ -1.94
SNL1	YIL016W	ARO7	P32178	256 aa		2.94	□□□□□ -1.94
SNL1	YIL016W	GVP36	P40531	326 aa	Known RBP	2.94	□□□□□ -1.94
SNL1	YIL016W	EAF6	P47128	113 aa		2.94	□□□□□ -1.94
SNL1	YIL016W	MIX17	Q03667	156 aa		2.94	□□□□□ -1.94
SNL1	YIL016W	YKL102C	P34249	101 aa		2.93	□□□□□ -1.94
SNL1	YIL016W	PGD1	P40356	397 aa		2.93	□□□□□ -1.94
SNL1	YIL016W	SER2	P42941	309 aa		2.93	□□□□□ -1.94
SNL1	YIL016W	YFH7	P43591	353 aa		2.93	□□□□□ -1.94
SNL1	YIL016W	CIS3	P47001	227 aa		2.93	□□□□□ -1.94
SNL1	YIL016W	COS6	P53344	381 aa		2.93	□□□□□ -1.94
SNL1	YIL016W	PGA1	P53896	198 aa		2.93	□□□□□ -1.94
SNL1	YIL016W	VPS68	Q12016	184 aa		2.93	□□□□□ -1.94
SNL1	YIL016W	YPR014C	Q6B0W2	109 aa		2.93	□□□□□ -1.94
SNL1	YIL016W	YML100W-A	Q8TGT0	57 aa		2.93	□□□□□ -1.94
SNL1	YIL016W	FIG1	P38224	298 aa		2.92	□□□□□ -1.94
SNL1	YIL016W	YEA4	P40004	342 aa		2.92	□□□□□ -1.94
SNL1	YIL016W	SKI6	P46948	246 aa	Predicted RBP	2.92	□□□□□ -1.94
SNL1	YIL016W	GPI17	Q04080	534 aa		2.92	□□□□□ -1.94
SNL1	YIL016W	MPD1	Q12404	318 aa	Known RBP	2.92	□□□□□ -1.94
SNL1	YIL016W	CMD1	P06787	147 aa	Known RBP	2.91	□□□□□ -1.94
SNL1	YIL016W	OCH1	P31755	480 aa		2.91	□□□□□ -1.94
SNL1	YIL016W	OPY1	P38271	328 aa		2.91	□□□□□ -1.94
SNL1	YIL016W	DER1	P38307	211 aa		2.91	□□□□□ -1.94
SNL1	YIL016W	AVT2	P39981	480 aa		2.91	□□□□□ -1.94
SNL1	YIL016W	PLP1	Q04004	230 aa		2.91	□□□□□ -1.94
SNL1	YIL016W	HRT1	Q08273	121 aa		2.91	□□□□□ -1.94
SNL1	YIL016W	CPA1	P07258	411 aa	Known RBP	2.9	□□□□□ -1.95
SNL1	YIL016W	UMP1	P38293	148 aa		2.9	□□□□□ -1.95
SNL1	YIL016W	MTW1	P39731	289 aa		2.9	□□□□□ -1.95
SNL1	YIL016W	TDA4	P47153	279 aa		2.9	□□□□□ -1.95
SNL1	YIL016W	YNR062C	P53748	327 aa		2.9	□□□□□ -1.95
SNL1	YIL016W	NUP49	Q02199	472 aa		2.9	□□□□□ -1.95
SNL1	YIL016W	YLR053C	Q12026	108 aa		2.9	□□□□□ -1.95
SNL1	YIL016W	RDI1	Q12434	202 aa		2.9	□□□□□ -1.95
SNL1	YIL016W	MEI4	P29467	408 aa		2.89	□□□□□ -1.95
SNL1	YIL016W	MDH3	P32419	343 aa	Known RBP RIP-Chip data	2.89	□□□□□ -1.95	not detected
SNL1	YIL016W	CLB6	P32943	380 aa		2.89	□□□□□ -1.95
SNL1	YIL016W	SNC2	P33328	115 aa		2.89	□□□□□ -1.95
SNL1	YIL016W	FMP23	P38231	175 aa		2.89	□□□□□ -1.95
SNL1	YIL016W	EDC3	P39998	551 aa	Known RBP	2.89	□□□□□ -1.95
SNL1	YIL016W	RPL33B	P41056	107 aa	Known RBP	2.89	□□□□□ -1.95
SNL1	YIL016W	GPI14	P47088	403 aa	Known RBP	2.89	□□□□□ -1.95
SNL1	YIL016W	SBH2	P52871	88 aa		2.89	□□□□□ -1.95
SNL1	YIL016W	YMR099C	Q03161	297 aa	Known RBP	2.89	□□□□□ -1.95

Retrieved 100 of 5,963 RNA–protein pairs in 2212 ms