RNA–Protein interactions for RNA: YGR003W

CUL3, Transcript of Ubiquitin-protein ligase, yeastyeast

Gene CUL3, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CUL3YGR003W SEY1Q99287 776 aa0.37□□□□□ -2.35
CUL3YGR003W KSS1P14681 368 aa0.37□□□□□ -2.35
CUL3YGR003W RPB3P16370 318 aaKnown RBP0.37□□□□□ -2.35
CUL3YGR003W TVP38P36164 337 aa0.37□□□□□ -2.35
CUL3YGR003W SKG1P36169 355 aa0.37□□□□□ -2.35
CUL3YGR003W YBR209WP38311 105 aa0.37□□□□□ -2.35
CUL3YGR003W YBR285WP38354 144 aa0.37□□□□□ -2.35
CUL3YGR003W YEL008WP40001 126 aa0.37□□□□□ -2.35
CUL3YGR003W RTR1P40084 226 aaPredicted RBP0.37□□□□□ -2.35
CUL3YGR003W YAE1P47118 141 aaPredicted RBP0.37□□□□□ -2.35
CUL3YGR003W CWC23P52868 283 aaPredicted RBP0.37□□□□□ -2.35
CUL3YGR003W RPL28P02406 149 aaKnown RBP0.36□□□□□ -2.35
CUL3YGR003W SPO13P23624 291 aa0.36□□□□□ -2.35
CUL3YGR003W TAF14P35189 244 aa0.36□□□□□ -2.35
CUL3YGR003W FLX1P40464 311 aa0.36□□□□□ -2.35
CUL3YGR003W OTU1P43558 301 aa0.36□□□□□ -2.35
CUL3YGR003W PDR17P53844 350 aa0.36□□□□□ -2.35
CUL3YGR003W YDL180WQ12301 547 aa0.36□□□□□ -2.35
CUL3YGR003W YER188C-AP0C0V2 99 aa0.36□□□□□ -2.35
CUL3YGR003W BET1P22804 142 aa0.36□□□□□ -2.35
CUL3YGR003W YCL042WP25572 119 aa0.36□□□□□ -2.35
CUL3YGR003W SPS18P32572 300 aa0.36□□□□□ -2.35
CUL3YGR003W SHE2P36068 246 aaKnown RBP RIP-Chip data0.36□□□□□ -2.35not detected
CUL3YGR003W OPY1P38271 328 aa0.36□□□□□ -2.35
CUL3YGR003W COX15P40086 486 aa0.36□□□□□ -2.35
CUL3YGR003W YPL073CP40323 161 aa0.36□□□□□ -2.35
CUL3YGR003W YML108WQ03759 105 aa0.36□□□□□ -2.35
CUL3YGR003W GGA1Q06336 557 aa0.36□□□□□ -2.35
CUL3YGR003W YRA1Q12159 226 aaKnown RBP0.36□□□□□ -2.35
CUL3YGR003W CDC33P07260 213 aaKnown RBP0.35□□□□□ -2.35
CUL3YGR003W URA5P13298 226 aaKnown RBP0.35□□□□□ -2.35
CUL3YGR003W GCN3P14741 305 aa0.35□□□□□ -2.35
CUL3YGR003W PPA2P28239 310 aa0.35□□□□□ -2.35
CUL3YGR003W KDX1P36005 433 aa0.35□□□□□ -2.35
CUL3YGR003W LSM7P53905 115 aaKnown RBP0.35□□□□□ -2.35
CUL3YGR003W COG5P53951 403 aa0.35□□□□□ -2.35
CUL3YGR003W YMR252CQ04814 134 aa0.35□□□□□ -2.35
CUL3YGR003W PRP8P33334 2413 aaKnown RBP0.35□□□□□ -2.35
CUL3YGR003W YBR121C-AP0C5L4 52 aa0.34□□□□□ -2.35
CUL3YGR003W MER1P16523 270 aa0.34□□□□□ -2.35
CUL3YGR003W SSO1P32867 290 aa0.34□□□□□ -2.35
CUL3YGR003W PRP18P33411 251 aaPredicted RBP0.34□□□□□ -2.35
CUL3YGR003W RMD6P39975 231 aa0.34□□□□□ -2.35
CUL3YGR003W YER034WP40022 185 aaKnown RBP0.34□□□□□ -2.35
CUL3YGR003W SOK1P40317 901 aa0.34□□□□□ -2.35
CUL3YGR003W RAD17P48581 401 aa0.34□□□□□ -2.35
CUL3YGR003W RPL37BP51402 88 aaKnown RBP0.34□□□□□ -2.35
CUL3YGR003W ARO8P53090 500 aaKnown RBP0.34□□□□□ -2.35
CUL3YGR003W CUE4Q04201 117 aaPredicted RBP0.34□□□□□ -2.35
CUL3YGR003W RNH202Q05635 350 aa0.34□□□□□ -2.35
CUL3YGR003W JLP1Q12358 412 aa0.34□□□□□ -2.35
CUL3YGR003W POR1P04840 283 aaKnown RBP0.34□□□□□ -2.36
CUL3YGR003W RPL24BP24000 155 aaKnown RBP0.34□□□□□ -2.36
CUL3YGR003W BMH2P34730 273 aaKnown RBP0.34□□□□□ -2.36
CUL3YGR003W YHL018WP38744 120 aaPredicted RBP0.34□□□□□ -2.36
CUL3YGR003W ERG10P41338 398 aaKnown RBP0.34□□□□□ -2.36
CUL3YGR003W OCH1P31755 480 aa0.33□□□□□ -2.36
CUL3YGR003W YHL042WP38729 150 aa0.33□□□□□ -2.36
CUL3YGR003W YFH7P43591 353 aa0.33□□□□□ -2.36
CUL3YGR003W DGA1Q08650 418 aa0.33□□□□□ -2.36
CUL3YGR003W FIT2Q08906 153 aa0.33□□□□□ -2.36
CUL3YGR003W GIS3Q12418 502 aa0.33□□□□□ -2.36
CUL3YGR003W YLR422WQ06409 1932 aa0.33□□□□□ -2.36
CUL3YGR003W MDM35O60200 86 aa0.33□□□□□ -2.36
CUL3YGR003W MSS2P40990 351 aa0.33□□□□□ -2.36
CUL3YGR003W IRC18P47056 224 aa0.33□□□□□ -2.36
CUL3YGR003W AIM25P47140 327 aa0.33□□□□□ -2.36
CUL3YGR003W CWC27Q02770 301 aa0.33□□□□□ -2.36
CUL3YGR003W DIG2Q03373 323 aaKnown RBP0.33□□□□□ -2.36
CUL3YGR003W RFA3P26755 122 aaKnown RBP0.32□□□□□ -2.36
CUL3YGR003W TVP23P38962 199 aa0.32□□□□□ -2.36
CUL3YGR003W HYR1P40581 163 aaKnown RBP0.32□□□□□ -2.36
CUL3YGR003W YCL012CQ8J0M4 134 aa0.32□□□□□ -2.36
CUL3YGR003W DUR1,2P32528 1835 aaKnown RBP0.32□□□□□ -2.36
CUL3YGR003W NHP6BP11633 99 aaKnown RBP0.32□□□□□ -2.36
CUL3YGR003W YCR087C-AP37263 153 aa0.32□□□□□ -2.36
CUL3YGR003W YLR460CP54007 376 aa0.32□□□□□ -2.36
CUL3YGR003W RCE1Q03530 315 aa0.32□□□□□ -2.36
CUL3YGR003W HNT1Q04344 158 aaKnown RBP0.32□□□□□ -2.36
CUL3YGR003W ODC2Q99297 307 aa0.32□□□□□ -2.36
CUL3YGR003W COX8P04039 78 aa0.31□□□□□ -2.36
CUL3YGR003W SEN2P16658 377 aa0.31□□□□□ -2.36
CUL3YGR003W STE18P18852 110 aa0.31□□□□□ -2.36
CUL3YGR003W MAG1P22134 296 aaKnown RBP0.31□□□□□ -2.36
CUL3YGR003W PAN3P36102 679 aaPredicted RBP0.31□□□□□ -2.36
CUL3YGR003W YHR007C-AQ07074 71 aa0.31□□□□□ -2.36
CUL3YGR003W IRC23Q08416 157 aa0.31□□□□□ -2.36
CUL3YGR003W IKI3Q06706 1349 aaKnown RBP0.31□□□□□ -2.36
CUL3YGR003W RPL25P04456 142 aaKnown RBP0.3□□□□□ -2.36
CUL3YGR003W COQ1P18900 473 aa0.3□□□□□ -2.36
CUL3YGR003W EDC3P39998 551 aaKnown RBP0.3□□□□□ -2.36
CUL3YGR003W YRB1P41920 201 aaKnown RBP0.3□□□□□ -2.36
CUL3YGR003W ARP3P47117 449 aaKnown RBP0.3□□□□□ -2.36
CUL3YGR003W YMR099CQ03161 297 aaKnown RBP0.3□□□□□ -2.36
CUL3YGR003W YPR174CQ06616 221 aaPredicted RBP0.3□□□□□ -2.36
CUL3YGR003W YPR013CQ12145 317 aa0.3□□□□□ -2.36
CUL3YGR003W PST2Q12335 198 aaKnown RBP0.3□□□□□ -2.36
CUL3YGR003W COA3Q3E7B2 85 aa0.3□□□□□ -2.36
CUL3YGR003W PHO85P17157 305 aa0.3□□□□□ -2.36
CUL3YGR003W CNB1P25296 175 aa0.3□□□□□ -2.36
Retrieved 100 of 5,963 RNA–protein pairs in 35.9 ms