RNA–Protein interactions for RNA: YFR050C

PRE4, Transcript of Beta 7 subunit of the 20S proteasome, yeastyeast

Gene PRE4, Length 801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE4YFR050C YJR056CP47115 236 aa1.18□□□□□ -2.22
PRE4YFR050C YNR066CP53752 436 aa1.18□□□□□ -2.22
PRE4YFR050C YPL080CQ02826 108 aa1.18□□□□□ -2.22
PRE4YFR050C MIX17Q03667 156 aa1.18□□□□□ -2.22
PRE4YFR050C DXO1Q06349 442 aa1.18□□□□□ -2.22
PRE4YFR050C YPL264CQ08980 353 aa1.18□□□□□ -2.22
PRE4YFR050C RNR2P09938 399 aaKnown RBP1.17□□□□□ -2.22
PRE4YFR050C YCR001WP25347 104 aa1.17□□□□□ -2.22
PRE4YFR050C ARO4P32449 370 aaKnown RBP1.17□□□□□ -2.22
PRE4YFR050C MRPL6P32904 214 aa1.17□□□□□ -2.22
PRE4YFR050C PET8P38921 284 aa1.17□□□□□ -2.22
PRE4YFR050C SCC4P40090 624 aa1.17□□□□□ -2.22
PRE4YFR050C YPT32P51996 222 aaKnown RBP1.17□□□□□ -2.22
PRE4YFR050C BRR6P53062 197 aa1.17□□□□□ -2.22
PRE4YFR050C ARC18Q05933 178 aaKnown RBP1.17□□□□□ -2.22
PRE4YFR050C YPR098CQ06089 161 aa1.17□□□□□ -2.22
PRE4YFR050C YLR126CQ12288 251 aa1.17□□□□□ -2.22
PRE4YFR050C DSF1P0CX08 502 aa1.16□□□□□ -2.22
PRE4YFR050C YNR073CP0CX09 502 aa1.16□□□□□ -2.22
PRE4YFR050C ERD2P18414 219 aa1.16□□□□□ -2.22
PRE4YFR050C HSP30P25619 332 aa1.16□□□□□ -2.22
PRE4YFR050C YEL043WP32618 956 aa1.16□□□□□ -2.22
PRE4YFR050C ZRT1P32804 376 aa1.16□□□□□ -2.22
PRE4YFR050C AIM29P36154 155 aa1.16□□□□□ -2.22
PRE4YFR050C AGX1P43567 385 aa1.16□□□□□ -2.22
PRE4YFR050C YFR045WP43617 309 aa1.16□□□□□ -2.22
PRE4YFR050C GCD14P46959 383 aaPredicted RBP1.16□□□□□ -2.22
PRE4YFR050C YJL027CP47063 138 aaPredicted RBP1.16□□□□□ -2.22
PRE4YFR050C SEC13Q04491 297 aaKnown RBP1.16□□□□□ -2.22
PRE4YFR050C COQ10Q08058 207 aa1.16□□□□□ -2.22
PRE4YFR050C YOR292CQ08743 309 aa1.16□□□□□ -2.22
PRE4YFR050C GET4Q12125 312 aa1.16□□□□□ -2.22
PRE4YFR050C UTP23Q12339 254 aaKnown RBP1.16□□□□□ -2.22
PRE4YFR050C QCR6P00127 147 aa1.15□□□□□ -2.23
PRE4YFR050C KRE1P17260 313 aa1.15□□□□□ -2.23
PRE4YFR050C MCH2P36032 473 aa1.15□□□□□ -2.23
PRE4YFR050C SOP4P39543 234 aaPredicted RBP1.15□□□□□ -2.23
PRE4YFR050C XPT1P47165 209 aa1.15□□□□□ -2.23
PRE4YFR050C YGR017WP53210 297 aa1.15□□□□□ -2.23
PRE4YFR050C RGM1Q00453 211 aa1.15□□□□□ -2.23
PRE4YFR050C CDC123Q05791 360 aa1.15□□□□□ -2.23
PRE4YFR050C COX5BP00425 151 aa1.14□□□□□ -2.23
PRE4YFR050C YOL163WP0CF20 169 aa1.14□□□□□ -2.23
PRE4YFR050C RPL18AP0CX49 186 aaKnown RBP1.14□□□□□ -2.23
PRE4YFR050C RPL18BP0CX50 186 aaKnown RBP1.14□□□□□ -2.23
PRE4YFR050C RPL16BP26785 198 aaKnown RBP1.14□□□□□ -2.23
PRE4YFR050C PPA2P28239 310 aa1.14□□□□□ -2.23
PRE4YFR050C HYM1P32464 399 aa1.14□□□□□ -2.23
PRE4YFR050C YET1P35723 206 aa1.14□□□□□ -2.23
PRE4YFR050C BLI1P35727 113 aa1.14□□□□□ -2.23
PRE4YFR050C CBT1P36038 271 aaPredicted RBP1.14□□□□□ -2.23
PRE4YFR050C YKL075CP36083 450 aa1.14□□□□□ -2.23
PRE4YFR050C YBR063CP38083 404 aa1.14□□□□□ -2.23
PRE4YFR050C YBR096WP38256 230 aa1.14□□□□□ -2.23
PRE4YFR050C LIN1P38852 340 aaPredicted RBP1.14□□□□□ -2.23
PRE4YFR050C CDC40P40968 455 aaPredicted RBP1.14□□□□□ -2.23
PRE4YFR050C COS6P53344 381 aa1.14□□□□□ -2.23
PRE4YFR050C SGF11Q03067 99 aa1.14□□□□□ -2.23
PRE4YFR050C UPS1Q05776 175 aa1.14□□□□□ -2.23
PRE4YFR050C PEX30Q06169 523 aa1.14□□□□□ -2.23
PRE4YFR050C ARV1Q06541 321 aa1.14□□□□□ -2.23
PRE4YFR050C FEX1Q08913 375 aa1.14□□□□□ -2.23
PRE4YFR050C FEX2Q08991 375 aa1.14□□□□□ -2.23
PRE4YFR050C YPR1Q12458 312 aa1.14□□□□□ -2.23
PRE4YFR050C PRE7P23724 241 aaKnown RBP1.13□□□□□ -2.23
PRE4YFR050C IFM1P25038 676 aa1.13□□□□□ -2.23
PRE4YFR050C IMP1P28627 190 aa1.13□□□□□ -2.23
PRE4YFR050C VPH2P32341 215 aa1.13□□□□□ -2.23
PRE4YFR050C HIS2P38635 335 aa1.13□□□□□ -2.23
PRE4YFR050C FMP32P43557 207 aa1.13□□□□□ -2.23
PRE4YFR050C NHP10Q03435 203 aa1.13□□□□□ -2.23
PRE4YFR050C RPL22AP05749 121 aaKnown RBP1.12□□□□□ -2.23
PRE4YFR050C SNF6P18888 332 aa1.12□□□□□ -2.23
PRE4YFR050C RPB4P20433 221 aaPredicted RBP1.12□□□□□ -2.23
PRE4YFR050C MRPL3P36516 390 aa1.12□□□□□ -2.23
PRE4YFR050C END3P39013 349 aa1.12□□□□□ -2.23
PRE4YFR050C INA22P40576 216 aa1.12□□□□□ -2.23
PRE4YFR050C ALG13P53178 202 aa1.12□□□□□ -2.23
PRE4YFR050C MPP6P53725 186 aaPredicted RBP1.12□□□□□ -2.23
PRE4YFR050C ALG9P53868 555 aaKnown RBP1.12□□□□□ -2.23
PRE4YFR050C NNT1Q05874 261 aa1.12□□□□□ -2.23
PRE4YFR050C PBP4Q07362 185 aaKnown RBP1.12□□□□□ -2.23
PRE4YFR050C SRB4P32569 687 aa1.11□□□□□ -2.23
PRE4YFR050C POP4P38336 279 aa1.11□□□□□ -2.23
PRE4YFR050C NAS2P40555 220 aa1.11□□□□□ -2.23
PRE4YFR050C MIG2P53035 382 aa1.11□□□□□ -2.23
PRE4YFR050C MMS2P53152 137 aa1.11□□□□□ -2.23
PRE4YFR050C OKP1P53298 406 aa1.11□□□□□ -2.23
PRE4YFR050C YNR062CP53748 327 aa1.11□□□□□ -2.23
PRE4YFR050C CAB5Q03941 241 aa1.11□□□□□ -2.23
PRE4YFR050C VAM10Q08474 114 aa1.11□□□□□ -2.23
PRE4YFR050C MDY2Q12285 212 aa1.11□□□□□ -2.23
PRE4YFR050C TIM22Q12328 207 aa1.11□□□□□ -2.23
PRE4YFR050C YLR307C-AQ3E825 87 aa1.11□□□□□ -2.23
PRE4YFR050C YDR034C-AP0C289 58 aa1.1□□□□□ -2.23
PRE4YFR050C YPK2P18961 677 aa1.1□□□□□ -2.23
PRE4YFR050C YKL162CP36052 402 aa1.1□□□□□ -2.23
PRE4YFR050C YPC1P38298 316 aa1.1□□□□□ -2.23
PRE4YFR050C MBA1P38300 278 aa1.1□□□□□ -2.23
PRE4YFR050C AVT6P40074 448 aa1.1□□□□□ -2.23
Retrieved 100 of 5,963 RNA–protein pairs in 32 ms